Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_C18
(332 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S... 183 1e-46
CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein. 183 1e-46
BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23 p... 183 1e-46
Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal p... 43 2e-04
CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein. 43 2e-04
BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal... 43 2e-04
BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal... 43 2e-04
BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal... 43 2e-04
AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12 p... 43 2e-04
AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23 p... 37 0.013
X72012-1|CAA50891.1| 625|Homo sapiens endoglin protein. 30 2.0
DQ866809-1|ABI75346.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 2.0
AL162586-6|CAI39765.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 2.0
AL157935-2|CAI12605.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 2.0
EF186024-1|ABM60755.1| 1135|Homo sapiens WTX protein. 28 7.9
BC131633-1|AAI31634.1| 730|Homo sapiens WDR27 protein protein. 28 7.9
AL355852-3|CAI40637.1| 804|Homo sapiens family with sequence si... 28 7.9
AL355852-2|CAO03539.1| 1135|Homo sapiens family with sequence si... 28 7.9
AK097146-1|BAC04964.1| 804|Homo sapiens protein ( Homo sapiens ... 28 7.9
>D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S28
homologue protein.
Length = 143
Score = 183 bits (446), Expect = 1e-46
Identities = 84/100 (84%), Positives = 92/100 (92%)
Frame = +3
Query: 33 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 212
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 213 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV 332
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEV
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEV 100
>CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein.
Length = 143
Score = 183 bits (446), Expect = 1e-46
Identities = 84/100 (84%), Positives = 92/100 (92%)
Frame = +3
Query: 33 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 212
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 213 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV 332
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEV
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEV 100
>BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23
protein.
Length = 143
Score = 183 bits (446), Expect = 1e-46
Identities = 84/100 (84%), Positives = 92/100 (92%)
Frame = +3
Query: 33 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 212
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 213 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV 332
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEV
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEV 100
>Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 precursor protein.
Length = 138
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 141 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 299
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG 99
>CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein.
Length = 138
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 141 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 299
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG 99
>BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 141 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 299
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG 99
>BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 141 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 299
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG 99
>BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 141 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 299
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG 99
>AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12
protein.
Length = 138
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 141 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 299
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG 99
>AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23
protein.
Length = 59
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 282 FVPRDGCLNHIEENDEV 332
FVP DGCLN IEENDEV
Sbjct: 1 FVPNDGCLNFIEENDEV 17
>X72012-1|CAA50891.1| 625|Homo sapiens endoglin protein.
Length = 625
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 164 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 42
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>DQ866809-1|ABI75346.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 164 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 42
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>AL162586-6|CAI39765.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 164 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 42
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>AL157935-2|CAI12605.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 164 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 42
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>EF186024-1|ABM60755.1| 1135|Homo sapiens WTX protein.
Length = 1135
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 50 YSHGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLR 157
++ A ARE+ +R A GR+ + H +E G R
Sbjct: 589 HAREAHAREAYTREAYGREAYAREAHTWEAHGREAR 624
>BC131633-1|AAI31634.1| 730|Homo sapiens WDR27 protein protein.
Length = 730
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 159 HRRGSPSISYPCGLF*IPCRPIAARDDDSR 70
H G P+ YPCG+ PC AA + R
Sbjct: 651 HFEGHPTRGYPCGIAFSPCGRFAACGAEDR 680
>AL355852-3|CAI40637.1| 804|Homo sapiens family with sequence
similarity 123B protein.
Length = 804
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 50 YSHGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLR 157
++ A ARE+ +R A GR+ + H +E G R
Sbjct: 589 HAREAHAREAYTREAYGREAYAREAHTWEAHGREAR 624
>AL355852-2|CAO03539.1| 1135|Homo sapiens family with sequence
similarity 123B protein.
Length = 1135
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 50 YSHGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLR 157
++ A ARE+ +R A GR+ + H +E G R
Sbjct: 589 HAREAHAREAYTREAYGREAYAREAHTWEAHGREAR 624
>AK097146-1|BAC04964.1| 804|Homo sapiens protein ( Homo sapiens
cDNA FLJ39827 fis, clone SPLEN2012619. ).
Length = 804
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 50 YSHGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLR 157
++ A ARE+ +R A GR+ + H +E G R
Sbjct: 589 HAREAHAREAYTREAYGREAYAREAHTWEAHGREAR 624
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,894,941
Number of Sequences: 237096
Number of extensions: 1203229
Number of successful extensions: 3047
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3031
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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