Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_C18
         (332 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089523-1|AAL90261.1|  143|Drosophila melanogaster GM14585p pro...   207   3e-54
AE013599-1845|AAF58277.2|  143|Drosophila melanogaster CG8415-PA...   207   3e-54
M19494-1|AAA28935.1|  140|Drosophila melanogaster protein ( D.me...    51   4e-07
BT015958-1|AAV36843.1|  140|Drosophila melanogaster RH56553p pro...    51   4e-07
AL133505-2|CAB65841.1|  140|Drosophila melanogaster EG:BACH59J11...    51   4e-07
AL133505-1|CAB63528.1|  154|Drosophila melanogaster EG:BACH59J11...    51   4e-07
AE014298-399|AAF45781.1|  140|Drosophila melanogaster CG7925-PB ...    51   4e-07
AJ250320-1|CAB65721.1|  140|Drosophila melanogaster technical kn...    48   3e-06
AE014297-650|AAF54148.1|  358|Drosophila melanogaster CG18268-PA...    28   2.5  
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    28   3.4  
AE014296-406|AAF47604.1| 4796|Drosophila melanogaster CG1915-PA,...    28   3.4  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    28   3.4  
AB026845-1|BAA90301.2| 4796|Drosophila melanogaster kettin protein.    28   3.4  
AE013599-3067|AAS64909.2|  367|Drosophila melanogaster CG13439-P...    27   4.4  
BT003270-1|AAO25027.1|  926|Drosophila melanogaster LD20211p pro...    27   5.9  
AY069361-1|AAL39506.1|  513|Drosophila melanogaster LD06532p pro...    27   5.9  
AE014296-66|AAF47366.1|  926|Drosophila melanogaster CG7008-PA p...    27   5.9  
X57480-1|CAA40718.1|  392|Drosophila melanogaster odd protein.         27   7.8  
BT015214-1|AAT94443.1|  392|Drosophila melanogaster RE48009p pro...    27   7.8  
AE014134-635|AAF51085.1|  392|Drosophila melanogaster CG3851-PA ...    27   7.8  

>AY089523-1|AAL90261.1|  143|Drosophila melanogaster GM14585p
           protein.
          Length = 143

 Score =  207 bits (505), Expect = 3e-54
 Identities = 92/100 (92%), Positives = 99/100 (99%)
 Frame = +3

Query: 33  MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 212
           MGKPRG+RTARKHVNHRR+QRWADK++KKAH+GTRWKANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1   MGKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60

Query: 213 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV 332
           QPNSAIRKCVRVQLIKNGKK+TAFVPRDG LN+IEENDEV
Sbjct: 61  QPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEV 100


>AE013599-1845|AAF58277.2|  143|Drosophila melanogaster CG8415-PA
           protein.
          Length = 143

 Score =  207 bits (505), Expect = 3e-54
 Identities = 92/100 (92%), Positives = 99/100 (99%)
 Frame = +3

Query: 33  MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 212
           MGKPRG+RTARKHVNHRR+QRWADK++KKAH+GTRWKANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1   MGKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60

Query: 213 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV 332
           QPNSAIRKCVRVQLIKNGKK+TAFVPRDG LN+IEENDEV
Sbjct: 61  QPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEV 100


>M19494-1|AAA28935.1|  140|Drosophila melanogaster protein (
           D.melanogaster tko (technical knockout) locus mRNA
           encoding tko gene product,complete cds. ).
          Length = 140

 Score = 50.8 bits (116), Expect = 4e-07
 Identities = 28/70 (40%), Positives = 45/70 (64%)
 Frame = +3

Query: 123 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 302
           H+ TR    P  G   AKG+VL+ +  + K+PNSA RKCV V+L   GK++ A++P  G 
Sbjct: 42  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98

Query: 303 LNHIEENDEV 332
            ++++E++ V
Sbjct: 99  GHNLQEHNIV 108


>BT015958-1|AAV36843.1|  140|Drosophila melanogaster RH56553p
           protein.
          Length = 140

 Score = 50.8 bits (116), Expect = 4e-07
 Identities = 28/70 (40%), Positives = 45/70 (64%)
 Frame = +3

Query: 123 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 302
           H+ TR    P  G   AKG+VL+ +  + K+PNSA RKCV V+L   GK++ A++P  G 
Sbjct: 42  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98

Query: 303 LNHIEENDEV 332
            ++++E++ V
Sbjct: 99  GHNLQEHNIV 108


>AL133505-2|CAB65841.1|  140|Drosophila melanogaster
           EG:BACH59J11.1,FBgn0003714;tko protein.
          Length = 140

 Score = 50.8 bits (116), Expect = 4e-07
 Identities = 28/70 (40%), Positives = 45/70 (64%)
 Frame = +3

Query: 123 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 302
           H+ TR    P  G   AKG+VL+ +  + K+PNSA RKCV V+L   GK++ A++P  G 
Sbjct: 42  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98

Query: 303 LNHIEENDEV 332
            ++++E++ V
Sbjct: 99  GHNLQEHNIV 108


>AL133505-1|CAB63528.1|  154|Drosophila melanogaster
           EG:BACH59J11.1,FBgn0003714;tko protein.
          Length = 154

 Score = 50.8 bits (116), Expect = 4e-07
 Identities = 28/70 (40%), Positives = 45/70 (64%)
 Frame = +3

Query: 123 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 302
           H+ TR    P  G   AKG+VL+ +  + K+PNSA RKCV V+L   GK++ A++P  G 
Sbjct: 56  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 112

Query: 303 LNHIEENDEV 332
            ++++E++ V
Sbjct: 113 GHNLQEHNIV 122


>AE014298-399|AAF45781.1|  140|Drosophila melanogaster CG7925-PB
           protein.
          Length = 140

 Score = 50.8 bits (116), Expect = 4e-07
 Identities = 28/70 (40%), Positives = 45/70 (64%)
 Frame = +3

Query: 123 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 302
           H+ TR    P  G   AKG+VL+ +  + K+PNSA RKCV V+L   GK++ A++P  G 
Sbjct: 42  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98

Query: 303 LNHIEENDEV 332
            ++++E++ V
Sbjct: 99  GHNLQEHNIV 108


>AJ250320-1|CAB65721.1|  140|Drosophila melanogaster technical
           knockout protein protein.
          Length = 140

 Score = 48.0 bits (109), Expect = 3e-06
 Identities = 27/70 (38%), Positives = 44/70 (62%)
 Frame = +3

Query: 123 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 302
           H+ TR    P  G   AKG+VL+ +  + K+PNSA RKCV V+    GK++ A++P  G 
Sbjct: 42  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVR-HSTGKEMVAYIP--GI 98

Query: 303 LNHIEENDEV 332
            ++++E++ V
Sbjct: 99  GHNLQEHNIV 108


>AE014297-650|AAF54148.1|  358|Drosophila melanogaster CG18268-PA
           protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +3

Query: 150 PFGGASHAKGIVLEKVGVEAK--QPNSAIRKCVRVQLIK 260
           PFG   +   +VLE+ G   K  Q    IRKCV +  +K
Sbjct: 123 PFGNVEYVLKVVLERRGTHNKCFQQRLVIRKCVELADLK 161


>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
          Length = 16215

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +2

Query: 140  EGEPLRWCISC*GH-RPRKSW 199
            EG+P R+C+   GH RPR  W
Sbjct: 4105 EGDPARFCVRVTGHPRPRVMW 4125


>AE014296-406|AAF47604.1| 4796|Drosophila melanogaster CG1915-PA,
            isoform A protein.
          Length = 4796

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +2

Query: 140  EGEPLRWCISC*GH-RPRKSW 199
            EG+P R+C+   GH RPR  W
Sbjct: 4105 EGDPARFCVRVTGHPRPRVMW 4125


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
            isoform C protein.
          Length = 18074

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +2

Query: 140  EGEPLRWCISC*GH-RPRKSW 199
            EG+P R+C+   GH RPR  W
Sbjct: 4105 EGDPARFCVRVTGHPRPRVMW 4125


>AB026845-1|BAA90301.2| 4796|Drosophila melanogaster kettin protein.
          Length = 4796

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +2

Query: 140  EGEPLRWCISC*GH-RPRKSW 199
            EG+P R+C+   GH RPR  W
Sbjct: 4105 EGDPARFCVRVTGHPRPRVMW 4125


>AE013599-3067|AAS64909.2|  367|Drosophila melanogaster CG13439-PA
           protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -1

Query: 143 LPSRTHVGFFEFLVGPSLLATMIHVLARRANTPRFTHYDSANTIGP 6
           LPSR ++G   +L+G  LL +M+ +    A         S  TI P
Sbjct: 3   LPSRANIGLLNWLIGWLLLLSMVLLRGYNAALAPTPPTTSTTTISP 48


>BT003270-1|AAO25027.1|  926|Drosophila melanogaster LD20211p
           protein.
          Length = 926

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 225 AIRKCVRVQLIKNGKKVTAFVPRDGCL 305
           A+R    V+ + +G ++  FVP+D CL
Sbjct: 534 ALRTEAIVEFVASGSRLRIFVPKDSCL 560


>AY069361-1|AAL39506.1|  513|Drosophila melanogaster LD06532p
           protein.
          Length = 513

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 225 AIRKCVRVQLIKNGKKVTAFVPRDGCL 305
           A+R    V+ + +G ++  FVP+D CL
Sbjct: 121 ALRTEAIVEFVASGSRLRIFVPKDSCL 147


>AE014296-66|AAF47366.1|  926|Drosophila melanogaster CG7008-PA
           protein.
          Length = 926

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 225 AIRKCVRVQLIKNGKKVTAFVPRDGCL 305
           A+R    V+ + +G ++  FVP+D CL
Sbjct: 534 ALRTEAIVEFVASGSRLRIFVPKDSCL 560


>X57480-1|CAA40718.1|  392|Drosophila melanogaster odd protein.
          Length = 392

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -3

Query: 252 AVHEHTYE-WLNSAAWLQRQLFRGRCP*HEMHHRRGSPSISYP 127
           AVH+     W+ +AA  Q+Q  + + P H  HH  G P   +P
Sbjct: 125 AVHQQLMNHWIRNAAIYQQQQQQQQHPHH--HHHHGHPHHPHP 165


>BT015214-1|AAT94443.1|  392|Drosophila melanogaster RE48009p
           protein.
          Length = 392

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -3

Query: 252 AVHEHTYE-WLNSAAWLQRQLFRGRCP*HEMHHRRGSPSISYP 127
           AVH+     W+ +AA  Q+Q  + + P H  HH  G P   +P
Sbjct: 125 AVHQQLMNHWIRNAAIYQQQQQQQQHPHH--HHHHGHPHHPHP 165


>AE014134-635|AAF51085.1|  392|Drosophila melanogaster CG3851-PA
           protein.
          Length = 392

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -3

Query: 252 AVHEHTYE-WLNSAAWLQRQLFRGRCP*HEMHHRRGSPSISYP 127
           AVH+     W+ +AA  Q+Q  + + P H  HH  G P   +P
Sbjct: 125 AVHQQLMNHWIRNAAIYQQQQQQQQHPHH--HHHHGHPHHPHP 165


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,893,213
Number of Sequences: 53049
Number of extensions: 359593
Number of successful extensions: 980
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)