Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_C18
(332 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70684-7|CAA94601.1| 143|Caenorhabditis elegans Hypothetical pr... 188 8e-49
Z92838-1|CAB07406.1| 157|Caenorhabditis elegans Hypothetical pr... 45 2e-05
AF036693-4|AAK29786.1| 360|Caenorhabditis elegans Hypothetical ... 28 1.4
Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical pr... 27 2.5
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 26 5.7
Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 25 10.0
Z49125-6|CAA88937.2| 776|Caenorhabditis elegans Hypothetical pr... 25 10.0
AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical ... 25 10.0
>Z70684-7|CAA94601.1| 143|Caenorhabditis elegans Hypothetical
protein F28D1.7 protein.
Length = 143
Score = 188 bits (458), Expect = 8e-49
Identities = 83/100 (83%), Positives = 92/100 (92%)
Frame = +3
Query: 33 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 212
MGKP+G+ TARK HR+EQRW DK +KKAH+GTRWK+NPFGGASHAKGIVLEK+GVEAK
Sbjct: 1 MGKPKGLCTARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAK 60
Query: 213 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV 332
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN +EENDEV
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDEV 100
>Z92838-1|CAB07406.1| 157|Caenorhabditis elegans Hypothetical
protein T03D8.2 protein.
Length = 157
Score = 44.8 bits (101), Expect = 2e-05
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +3
Query: 159 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV 332
G SH KGIVL+ V K+PNS RKC V+L G +V A++P G ++++E+ +V
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQV 126
>AF036693-4|AAK29786.1| 360|Caenorhabditis elegans Hypothetical
protein C49A9.6 protein.
Length = 360
Score = 28.3 bits (60), Expect = 1.4
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Frame = +3
Query: 30 VMGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFG--------GASHAKGIV 185
V K + + KH H + + D FKK GTRW +G G + +G +
Sbjct: 235 VDSKTESLFVSNKH--HLEQGHFFDGNFKKNADGTRWTCQNYGQPVEQLAEGGINQRGKI 292
Query: 186 LEKVGVEAKQPNSAIRK 236
V +E QP RK
Sbjct: 293 FFTVKIENFQPARGNRK 309
>Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical
protein T23D8.9a protein.
Length = 811
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 276 TAFVPRDGCLNHIEEN 323
T FVP+DG LN I+EN
Sbjct: 653 TPFVPKDGVLNVIDEN 668
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 77 SSSRAAMGRQGIQKSPHGYEMEGEPLRWCI 166
S SR+ R+ +SP E +P RWC+
Sbjct: 579 SRSRSPPRRRRRSRSPRRREEHTDPTRWCV 608
>Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 85 ASSDGPTRNSKKPTWVRDGRR 147
A + GP + KKPT V +GRR
Sbjct: 33 APTKGPVQPQKKPTTVDNGRR 53
>Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 85 ASSDGPTRNSKKPTWVRDGRR 147
A + GP + KKPT V +GRR
Sbjct: 33 APTKGPVQPQKKPTTVDNGRR 53
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 25.4 bits (53), Expect = 10.0
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +3
Query: 54 RTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQ 215
+ K + R +Q DKE ++A R A A + + EKV ++ KQ
Sbjct: 362 KALEKEKHERLQQEAKDKEDERARDKARKDAKAREEAKSREDVKAEKVAIDPKQ 415
>Z49125-6|CAA88937.2| 776|Caenorhabditis elegans Hypothetical
protein C47G2.5a protein.
Length = 776
Score = 25.4 bits (53), Expect = 10.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 176 GHRPRKSWR*SQAAEFSH 229
GHRP +W A +FSH
Sbjct: 676 GHRPENNWVDETAPDFSH 693
>AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical
protein Y95B8A.7 protein.
Length = 608
Score = 25.4 bits (53), Expect = 10.0
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 76 IIVASSDGPTRNSKKPTW 129
II +DGPT KP W
Sbjct: 63 IIAPGADGPTETKAKPKW 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,470,312
Number of Sequences: 27780
Number of extensions: 176649
Number of successful extensions: 429
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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