Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_C17
(231 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029539-1|AAH29539.1| 239|Homo sapiens tetratricopeptide repea... 30 1.5
AK054935-1|BAB70830.1| 192|Homo sapiens protein ( Homo sapiens ... 30 1.5
BC002939-1|AAH02939.1| 501|Homo sapiens CLCC1 protein protein. 28 4.6
AL449266-14|CAI14365.1| 501|Homo sapiens Mid-1-related chloride... 28 4.6
AL449266-13|CAI14364.1| 430|Homo sapiens Mid-1-related chloride... 28 4.6
AL449266-12|CAI14366.1| 551|Homo sapiens Mid-1-related chloride... 28 4.6
AL449266-11|CAI14363.1| 366|Homo sapiens Mid-1-related chloride... 28 4.6
AB107036-1|BAC92750.1| 5061|Homo sapiens epiplakin protein. 28 4.6
AB052918-1|BAB79263.1| 366|Homo sapiens Mid-1-related chloride ... 28 4.6
AB052917-1|BAB79262.1| 430|Homo sapiens Mid-1-related chloride ... 28 4.6
AB052916-1|BAB79261.1| 501|Homo sapiens Mid-1-related chloride ... 28 4.6
AB052915-1|BAB59018.1| 551|Homo sapiens Mid-1-related chloride ... 28 4.6
AB051895-1|BAB40803.1| 5065|Homo sapiens epiplakin 1 protein. 28 4.6
AB018304-1|BAA34481.2| 551|Homo sapiens KIAA0761 protein protein. 28 4.6
AM082990-1|CAL07136.1| 102|Homo sapiens immunoglobulin heavy ch... 28 6.1
AL833902-1|CAD38758.1| 545|Homo sapiens hypothetical protein pr... 27 8.1
AF525164-1|AAQ08897.1| 524|Homo sapiens DERPC protein. 27 8.1
>BC029539-1|AAH29539.1| 239|Homo sapiens tetratricopeptide repeat
domain 9B protein.
Length = 239
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -2
Query: 110 PGSGGSVTAHQWAARRGPT--PSGPIGAYRGRSARAS 6
PGSG + +AR GPT PSG +GA S RA+
Sbjct: 29 PGSGPGSGSRHGSARPGPTPEPSGSLGAALDSSLRAA 65
>AK054935-1|BAB70830.1| 192|Homo sapiens protein ( Homo sapiens
cDNA FLJ30373 fis, clone BRACE2007882, weakly similar to
Actin-depolymerizing protein N-WASP. ).
Length = 192
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -2
Query: 110 PGSGGSVTAHQWAARRGPT--PSGPIGAYRGRSARAS 6
PGSG + +AR GPT PSG +GA S RA+
Sbjct: 29 PGSGPGSGSRHGSARPGPTPEPSGSLGAALDSSLRAA 65
>BC002939-1|AAH02939.1| 501|Homo sapiens CLCC1 protein protein.
Length = 501
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 152 IRPRSRTT-EVIETAPGSGGSVTAHQWAARRGPTPSGPIG-AYRGR 21
+RPR R E I+ P G + + GPT GP Y GR
Sbjct: 324 LRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGR 369
>AL449266-14|CAI14365.1| 501|Homo sapiens Mid-1-related chloride
channel 1 (MCLC) protein.
Length = 501
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 152 IRPRSRTT-EVIETAPGSGGSVTAHQWAARRGPTPSGPIG-AYRGR 21
+RPR R E I+ P G + + GPT GP Y GR
Sbjct: 324 LRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGR 369
>AL449266-13|CAI14364.1| 430|Homo sapiens Mid-1-related chloride
channel 1 (MCLC) protein.
Length = 430
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 152 IRPRSRTT-EVIETAPGSGGSVTAHQWAARRGPTPSGPIG-AYRGR 21
+RPR R E I+ P G + + GPT GP Y GR
Sbjct: 253 LRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGR 298
>AL449266-12|CAI14366.1| 551|Homo sapiens Mid-1-related chloride
channel 1 (MCLC) protein.
Length = 551
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 152 IRPRSRTT-EVIETAPGSGGSVTAHQWAARRGPTPSGPIG-AYRGR 21
+RPR R E I+ P G + + GPT GP Y GR
Sbjct: 374 LRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGR 419
>AL449266-11|CAI14363.1| 366|Homo sapiens Mid-1-related chloride
channel 1 (MCLC) protein.
Length = 366
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 152 IRPRSRTT-EVIETAPGSGGSVTAHQWAARRGPTPSGPIG-AYRGR 21
+RPR R E I+ P G + + GPT GP Y GR
Sbjct: 189 LRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGR 234
>AB107036-1|BAC92750.1| 5061|Homo sapiens epiplakin protein.
Length = 5061
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -2
Query: 137 RTTEVIETAPGSGGSVTAHQWAARRGPTPSGPIGAYRGRSARA 9
R T +IE A + G+ Q ARRGP GP G G S R+
Sbjct: 2545 RLTAIIEEAEEAPGARPQLQ-DARRGPREPGPAGRGDGDSGRS 2586
>AB052918-1|BAB79263.1| 366|Homo sapiens Mid-1-related chloride
channel 4 protein.
Length = 366
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 152 IRPRSRTT-EVIETAPGSGGSVTAHQWAARRGPTPSGPIG-AYRGR 21
+RPR R E I+ P G + + GPT GP Y GR
Sbjct: 189 LRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGR 234
>AB052917-1|BAB79262.1| 430|Homo sapiens Mid-1-related chloride
channel 3 protein.
Length = 430
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 152 IRPRSRTT-EVIETAPGSGGSVTAHQWAARRGPTPSGPIG-AYRGR 21
+RPR R E I+ P G + + GPT GP Y GR
Sbjct: 253 LRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGR 298
>AB052916-1|BAB79261.1| 501|Homo sapiens Mid-1-related chloride
channel 2 protein.
Length = 501
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 152 IRPRSRTT-EVIETAPGSGGSVTAHQWAARRGPTPSGPIG-AYRGR 21
+RPR R E I+ P G + + GPT GP Y GR
Sbjct: 324 LRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGR 369
>AB052915-1|BAB59018.1| 551|Homo sapiens Mid-1-related chloride
channel 1 protein.
Length = 551
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 152 IRPRSRTT-EVIETAPGSGGSVTAHQWAARRGPTPSGPIG-AYRGR 21
+RPR R E I+ P G + + GPT GP Y GR
Sbjct: 374 LRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGR 419
>AB051895-1|BAB40803.1| 5065|Homo sapiens epiplakin 1 protein.
Length = 5065
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -2
Query: 137 RTTEVIETAPGSGGSVTAHQWAARRGPTPSGPIGAYRGRSARA 9
R T +IE A + G+ Q ARRGP GP G G S R+
Sbjct: 2545 RLTAIIEEAEEAPGARPQLQ-DARRGPREPGPAGRGDGDSGRS 2586
>AB018304-1|BAA34481.2| 551|Homo sapiens KIAA0761 protein protein.
Length = 551
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 152 IRPRSRTT-EVIETAPGSGGSVTAHQWAARRGPTPSGPIG-AYRGR 21
+RPR R E I+ P G + + GPT GP Y GR
Sbjct: 374 LRPRDRRRQEEIDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGR 419
>AM082990-1|CAL07136.1| 102|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 102
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 113 APGSGGSVTAHQWAARRGPTP 51
+P SGGSVT + +R GP P
Sbjct: 52 SPSSGGSVTTYFAVSREGPVP 72
>AL833902-1|CAD38758.1| 545|Homo sapiens hypothetical protein
protein.
Length = 545
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -2
Query: 164 RTIKIRPRSRTTEVIETAPGSGGSVTAHQWAARR-GPTPSGPIG 36
R ++ S TT T P G VT + AA GP+P+GP+G
Sbjct: 436 RATGLQGPSPTTFPRSTGPLGPGQVTFPRPAAGHLGPSPAGPVG 479
>AF525164-1|AAQ08897.1| 524|Homo sapiens DERPC protein.
Length = 524
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -2
Query: 164 RTIKIRPRSRTTEVIETAPGSGGSVTAHQWAARR-GPTPSGPIG 36
R ++ S TT T P G VT + AA GP+P+GP+G
Sbjct: 415 RATGLQGPSPTTFPRSTGPLGPGQVTFPRPAAGHLGPSPAGPVG 458
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,168,419
Number of Sequences: 237096
Number of extensions: 448104
Number of successful extensions: 1827
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1825
length of database: 76,859,062
effective HSP length: 55
effective length of database: 63,818,782
effective search space used: 1340194422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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