Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_C17
(231 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p... 27 2.4
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p... 25 5.5
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p... 25 5.5
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 25 5.5
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 25 5.5
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 25 5.5
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 25 5.5
Z81076-7|CAB03058.1| 411|Caenorhabditis elegans Hypothetical pr... 25 9.5
AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical ... 25 9.5
>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -2
Query: 65 RGPTPSGPIGAYR 27
+ PTP+GPIGA+R
Sbjct: 50 QAPTPAGPIGAFR 62
>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -2
Query: 65 RGPTPSGPIGAYR 27
+ PTP+GPIGA+R
Sbjct: 50 QAPTPAGPIGAFR 62
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 110 PGSGGSVTAHQWAARRGPTPSGPIG 36
PG+ G + +R GPTP P+G
Sbjct: 209 PGAQGMPQGYPGVSRGGPTPGQPMG 233
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 110 PGSGGSVTAHQWAARRGPTPSGPIG 36
PG+ G + +R GPTP P+G
Sbjct: 209 PGAQGMPQGYPGVSRGGPTPGQPMG 233
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 134 TTEVIETAPGSGGSVTAHQWAARRGPTP 51
TT T PG+G +VTA Q TP
Sbjct: 2024 TTSTTTTTPGTGPTVTAAQTTTTTPSTP 2051
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 134 TTEVIETAPGSGGSVTAHQWAARRGPTP 51
TT T PG+G +VTA Q TP
Sbjct: 2024 TTSTTTTTPGTGPTVTAAQTTTTTPSTP 2051
>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 25.4 bits (53), Expect = 5.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 146 PRSRTTEVIETAPGSGGSVTAHQWAARRGPTP-SGPIGAYRGRSARAS 6
PRSRT S G + W +R G TP SG I + S + S
Sbjct: 668 PRSRTPTSSSYGGRSVGGRSCKSWRSRGGETPNSGSISSSGQMSIQVS 715
>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 25.4 bits (53), Expect = 5.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 146 PRSRTTEVIETAPGSGGSVTAHQWAARRGPTP-SGPIGAYRGRSARAS 6
PRSRT S G + W +R G TP SG I + S + S
Sbjct: 668 PRSRTPTSSSYGGRSVGGRSCKSWRSRGGETPNSGSISSSGQMSIQVS 715
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 25.4 bits (53), Expect = 5.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 146 PRSRTTEVIETAPGSGGSVTAHQWAARRGPTP-SGPIGAYRGRSARAS 6
PRSRT S G + W +R G TP SG I + S + S
Sbjct: 668 PRSRTPTSSSYGGRSVGGRSCKSWRSRGGETPNSGSISSSGQMSIQVS 715
>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 25.4 bits (53), Expect = 5.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 146 PRSRTTEVIETAPGSGGSVTAHQWAARRGPTP-SGPIGAYRGRSARAS 6
PRSRT S G + W +R G TP SG I + S + S
Sbjct: 668 PRSRTPTSSSYGGRSVGGRSCKSWRSRGGETPNSGSISSSGQMSIQVS 715
>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 25.4 bits (53), Expect = 5.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 146 PRSRTTEVIETAPGSGGSVTAHQWAARRGPTP-SGPIGAYRGRSARAS 6
PRSRT S G + W +R G TP SG I + S + S
Sbjct: 668 PRSRTPTSSSYGGRSVGGRSCKSWRSRGGETPNSGSISSSGQMSIQVS 715
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 25.4 bits (53), Expect = 5.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 146 PRSRTTEVIETAPGSGGSVTAHQWAARRGPTP-SGPIGAYRGRSARAS 6
PRSRT S G + W +R G TP SG I + S + S
Sbjct: 668 PRSRTPTSSSYGGRSVGGRSCKSWRSRGGETPNSGSISSSGQMSIQVS 715
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 134 TTEVIETAPGSGGSVTAHQWAARRGPTP 51
TT T PG+G +VTA Q TP
Sbjct: 2024 TTSTTTTTPGTGPTVTAAQTTTTTPSTP 2051
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 25.4 bits (53), Expect = 5.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 146 PRSRTTEVIETAPGSGGSVTAHQWAARRGPTP-SGPIGAYRGRSARAS 6
PRSRT S G + W +R G TP SG I + S + S
Sbjct: 668 PRSRTPTSSSYGGRSVGGRSCKSWRSRGGETPNSGSISSSGQMSIQVS 715
>Z81076-7|CAB03058.1| 411|Caenorhabditis elegans Hypothetical
protein F35C5.6 protein.
Length = 411
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 95 SVTAHQWAARRGPTPSGPIGAYRGRSARASC 3
S T+ Q A +GPTPS P G + C
Sbjct: 20 STTSWQTGATQGPTPSTPPPTPGGSNVDREC 50
>AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical
protein Y67D2.4 protein.
Length = 313
Score = 24.6 bits (51), Expect = 9.5
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Frame = -1
Query: 84 PSVGRAAGAHALRTHR-GIPRE-VRAGLVP 1
P+VG+++ +A+RTH GI R+ V AG P
Sbjct: 124 PNVGKSSLINAIRTHTLGIKRKAVEAGARP 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,164,413
Number of Sequences: 27780
Number of extensions: 52647
Number of successful extensions: 157
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 12,740,198
effective HSP length: 56
effective length of database: 11,184,518
effective search space used: 223690360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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