Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_C16
(486 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 175 9e-46
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 175 9e-46
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 175 9e-46
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 170 2e-44
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 27 0.45
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 25 1.4
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 5.6
AF079312-1|AAC28093.1| 271|Anopheles gambiae 60S ribosomal prot... 23 7.3
AY752909-1|AAV30083.1| 92|Anopheles gambiae peroxidase 14 prot... 22 9.7
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 22 9.7
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 175 bits (425), Expect = 9e-46
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 284
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 285 HPVLLTEAPLKPKANREKMTQ 347
HPVLLTEAPL PKANREKMTQ
Sbjct: 102 HPVLLTEAPLNPKANREKMTQ 122
Score = 34.3 bits (75), Expect = 0.002
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
+LYASGRTTGIVLDSG
Sbjct: 142 SLYASGRTTGIVLDSG 157
Score = 29.5 bits (63), Expect = 0.064
Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = +1
Query: 10 SALVV-TWVGMCKR-FRGNDAPRAVF 81
+ALVV GMCK F G+DAPRAVF
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVF 32
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 175 bits (425), Expect = 9e-46
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 284
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 285 HPVLLTEAPLKPKANREKMTQ 347
HPVLLTEAPL PKANREKMTQ
Sbjct: 102 HPVLLTEAPLNPKANREKMTQ 122
Score = 34.3 bits (75), Expect = 0.002
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
+LYASGRTTGIVLDSG
Sbjct: 142 SLYASGRTTGIVLDSG 157
Score = 29.5 bits (63), Expect = 0.064
Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = +1
Query: 10 SALVV-TWVGMCKR-FRGNDAPRAVF 81
+ALVV GMCK F G+DAPRAVF
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVF 32
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 175 bits (425), Expect = 9e-46
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 284
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 285 HPVLLTEAPLKPKANREKMTQ 347
HPVLLTEAPL PKANREKMTQ
Sbjct: 102 HPVLLTEAPLNPKANREKMTQ 122
Score = 34.3 bits (75), Expect = 0.002
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
+LYASGRTTGIVLDSG
Sbjct: 142 SLYASGRTTGIVLDSG 157
Score = 29.5 bits (63), Expect = 0.064
Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = +1
Query: 10 SALVV-TWVGMCKR-FRGNDAPRAVF 81
+ALVV GMCK F G+DAPRAVF
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVF 32
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 170 bits (413), Expect = 2e-44
Identities = 75/81 (92%), Positives = 78/81 (96%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 284
Q VMVGMG KD+YVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGNKDAYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEE 101
Query: 285 HPVLLTEAPLKPKANREKMTQ 347
HPVLLTEAPL PK+NREKMTQ
Sbjct: 102 HPVLLTEAPLNPKSNREKMTQ 122
Score = 33.9 bits (74), Expect = 0.003
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
+LYASGRTTG+VLDSG
Sbjct: 142 SLYASGRTTGVVLDSG 157
Score = 29.1 bits (62), Expect = 0.085
Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
Frame = +1
Query: 13 ALVV-TWVGMCKR-FRGNDAPRAVF 81
ALVV GMCK F G+DAPRAVF
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVF 32
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 26.6 bits (56), Expect = 0.45
Identities = 21/69 (30%), Positives = 26/69 (37%)
Frame = +2
Query: 227 YGEDLASHLLQ*AACSSRGAPSLAHRSSPQAQSQQREDDTDLWFRKERVSKASKPRPHGS 406
Y ED SS GA S H +P ++SQ ED+ RK +
Sbjct: 619 YREDTTGSYKYGKLSSSGGASSTTHSGAP-SRSQSDEDEQHSVGRKGLAPLIQRGEGSFE 677
Query: 407 GKAYPRAGG 433
GKA P G
Sbjct: 678 GKAMPPGKG 686
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 25.0 bits (52), Expect = 1.4
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 278 RGAPSLAHRSSPQAQSQQREDDTDLWFRKE-RVSKASKPRP 397
RG PS HR PQ Q QQ++ + + + R + + RP
Sbjct: 240 RGRPSQRHR-QPQQQQQQQQQQGERYVPPQLRQQRQQQQRP 279
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.0 bits (47), Expect = 5.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 401 GSGKAYPRAGGSTLYASGRTTGIVLDSG 484
G+G A AGGST +G G+ + G
Sbjct: 3200 GAGLAMVGAGGSTAPGAGGVPGVAVVPG 3227
>AF079312-1|AAC28093.1| 271|Anopheles gambiae 60S ribosomal protein
rpL7a protein.
Length = 271
Score = 22.6 bits (46), Expect = 7.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 333 EKMTQTYGFGRNAFPKQ 383
EK + YG G+N PK+
Sbjct: 39 EKRVKNYGIGQNVQPKR 55
>AY752909-1|AAV30083.1| 92|Anopheles gambiae peroxidase 14
protein.
Length = 92
Score = 22.2 bits (45), Expect = 9.7
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -1
Query: 93 PTIEEYGAGSVVPAKPLAHSD 31
PT+ + + +P +PLAH +
Sbjct: 25 PTVANEFSAAALPVRPLAHPE 45
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 22.2 bits (45), Expect = 9.7
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 65 LPAPYSSIVGRLVPGRHGRHGSEG 136
LP P + R PGR G G G
Sbjct: 239 LPGPQGEVGPRGFPGRPGEKGVPG 262
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,500
Number of Sequences: 2352
Number of extensions: 13205
Number of successful extensions: 43
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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