Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_C16
(486 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 175 2e-44
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 175 2e-44
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 175 2e-44
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 175 2e-44
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 175 2e-44
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 175 2e-44
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 175 2e-44
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 175 2e-44
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 175 2e-44
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 173 6e-44
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 171 2e-43
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 100 5e-22
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 97 6e-21
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 97 6e-21
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 97 6e-21
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 91 3e-19
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 83 1e-16
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 75 4e-14
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 49 2e-06
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.004
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.004
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 29 1.4
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 27 5.5
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 7.2
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z68134-4|CAA92224.1| 567|Caenorhabditis elegans Hypothetical pr... 27 7.2
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 27 7.2
AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain (... 27 7.2
AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain (... 27 7.2
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 27 7.2
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 27 7.2
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z68882-3|CAA93106.2| 568|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 27 9.5
U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protea... 27 9.5
U23169-3|AAV58882.1| 284|Caenorhabditis elegans Regulator of g ... 27 9.5
U23169-2|AAM98050.1| 290|Caenorhabditis elegans Regulator of g ... 27 9.5
U23169-1|AAL02450.1| 363|Caenorhabditis elegans Regulator of g ... 27 9.5
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 27 9.5
AC006709-1|AAF60432.2| 256|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 175 bits (425), Expect = 2e-44
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 284
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 285 HPVLLTEAPLKPKANREKMTQ 347
HPVLLTEAPL PKANREKMTQ
Sbjct: 102 HPVLLTEAPLNPKANREKMTQ 122
Score = 33.9 bits (74), Expect = 0.063
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
+LYASGRTTG+VLDSG
Sbjct: 142 SLYASGRTTGVVLDSG 157
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 1 NRTSALVV-TWVGMCKR-FRGNDAPRAVF 81
+ +ALVV GMCK F G+DAPRAVF
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVF 32
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 175 bits (425), Expect = 2e-44
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 284
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 285 HPVLLTEAPLKPKANREKMTQ 347
HPVLLTEAPL PKANREKMTQ
Sbjct: 102 HPVLLTEAPLNPKANREKMTQ 122
Score = 34.3 bits (75), Expect = 0.048
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
+LYASGRTTGIVLDSG
Sbjct: 142 SLYASGRTTGIVLDSG 157
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = +1
Query: 10 SALVV-TWVGMCKR-FRGNDAPRAVF 81
+ALVV GMCK F G+DAPRAVF
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVF 32
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 175 bits (425), Expect = 2e-44
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 284
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 285 HPVLLTEAPLKPKANREKMTQ 347
HPVLLTEAPL PKANREKMTQ
Sbjct: 102 HPVLLTEAPLNPKANREKMTQ 122
Score = 33.9 bits (74), Expect = 0.063
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
+LYASGRTTG+VLDSG
Sbjct: 142 SLYASGRTTGVVLDSG 157
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 1 NRTSALVV-TWVGMCKR-FRGNDAPRAVF 81
+ +ALVV GMCK F G+DAPRAVF
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVF 32
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 175 bits (425), Expect = 2e-44
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 284
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 285 HPVLLTEAPLKPKANREKMTQ 347
HPVLLTEAPL PKANREKMTQ
Sbjct: 102 HPVLLTEAPLNPKANREKMTQ 122
Score = 33.9 bits (74), Expect = 0.063
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
+LYASGRTTG+VLDSG
Sbjct: 142 SLYASGRTTGVVLDSG 157
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 1 NRTSALVV-TWVGMCKR-FRGNDAPRAVF 81
+ +ALVV GMCK F G+DAPRAVF
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVF 32
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 175 bits (425), Expect = 2e-44
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 284
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 285 HPVLLTEAPLKPKANREKMTQ 347
HPVLLTEAPL PKANREKMTQ
Sbjct: 102 HPVLLTEAPLNPKANREKMTQ 122
Score = 33.9 bits (74), Expect = 0.063
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
+LYASGRTTG+VLDSG
Sbjct: 142 SLYASGRTTGVVLDSG 157
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 1 NRTSALVV-TWVGMCKR-FRGNDAPRAVF 81
+ +ALVV GMCK F G+DAPRAVF
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVF 32
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 175 bits (425), Expect = 2e-44
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 284
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 285 HPVLLTEAPLKPKANREKMTQ 347
HPVLLTEAPL PKANREKMTQ
Sbjct: 102 HPVLLTEAPLNPKANREKMTQ 122
Score = 34.3 bits (75), Expect = 0.048
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
+LYASGRTTGIVLDSG
Sbjct: 142 SLYASGRTTGIVLDSG 157
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/17 (76%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
Frame = +1
Query: 34 GMCKR-FRGNDAPRAVF 81
GMCK F G+DAPRAVF
Sbjct: 16 GMCKAGFAGDDAPRAVF 32
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 175 bits (425), Expect = 2e-44
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 284
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 285 HPVLLTEAPLKPKANREKMTQ 347
HPVLLTEAPL PKANREKMTQ
Sbjct: 102 HPVLLTEAPLNPKANREKMTQ 122
Score = 33.9 bits (74), Expect = 0.063
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
+LYASGRTTG+VLDSG
Sbjct: 142 SLYASGRTTGVVLDSG 157
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 1 NRTSALVV-TWVGMCKR-FRGNDAPRAVF 81
+ +ALVV GMCK F G+DAPRAVF
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVF 32
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 175 bits (425), Expect = 2e-44
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 284
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 28 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 87
Query: 285 HPVLLTEAPLKPKANREKMTQ 347
HPVLLTEAPL PKANREKMTQ
Sbjct: 88 HPVLLTEAPLNPKANREKMTQ 108
Score = 33.9 bits (74), Expect = 0.063
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
+LYASGRTTG+VLDSG
Sbjct: 128 SLYASGRTTGVVLDSG 143
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 175 bits (425), Expect = 2e-44
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 284
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 101
Query: 285 HPVLLTEAPLKPKANREKMTQ 347
HPVLLTEAPL PKANREKMTQ
Sbjct: 102 HPVLLTEAPLNPKANREKMTQ 122
Score = 33.9 bits (74), Expect = 0.063
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
+LYASGRTTG+VLDSG
Sbjct: 142 SLYASGRTTGVVLDSG 157
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 1 NRTSALVV-TWVGMCKR-FRGNDAPRAVF 81
+ +ALVV GMCK F G+DAPRAVF
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVF 32
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 173 bits (421), Expect = 6e-44
Identities = 77/81 (95%), Positives = 79/81 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 284
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEE
Sbjct: 41 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEE 100
Query: 285 HPVLLTEAPLKPKANREKMTQ 347
HPVLLTEAPL PK+NREKMTQ
Sbjct: 101 HPVLLTEAPLNPKSNREKMTQ 121
Score = 33.1 bits (72), Expect = 0.11
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
+LYASGRTTGIVLD+G
Sbjct: 141 SLYASGRTTGIVLDTG 156
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = +1
Query: 10 SALVV-TWVGMCKR-FRGNDAPRAVF 81
+ALVV GMCK F G+DAPRAVF
Sbjct: 6 AALVVDNGSGMCKAGFAGDDAPRAVF 31
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 171 bits (417), Expect = 2e-43
Identities = 77/78 (98%), Positives = 77/78 (98%)
Frame = +3
Query: 114 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 293
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 294 LLTEAPLKPKANREKMTQ 347
LLTEAPL PKANREKMTQ
Sbjct: 61 LLTEAPLNPKANREKMTQ 78
Score = 33.9 bits (74), Expect = 0.063
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
+LYASGRTTG+VLDSG
Sbjct: 98 SLYASGRTTGVVLDSG 113
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 100 bits (240), Expect = 5e-22
Identities = 42/82 (51%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = +3
Query: 111 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEH 287
VM G D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEH
Sbjct: 46 VMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEH 105
Query: 288 PVLLTEAPLKPKANREKMTQTY 353
PVLLT+APL P NRE+ + +
Sbjct: 106 PVLLTDAPLNPLKNRERSAEIF 127
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
+LYA+GRTTG+VLDSG
Sbjct: 145 SLYATGRTTGVVLDSG 160
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 97.1 bits (231), Expect = 6e-21
Identities = 44/45 (97%), Positives = 44/45 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 239
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = +1
Query: 10 SALVV-TWVGMCKR-FRGNDAPRAVF 81
+ALVV GMCK F G+DAPRAVF
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVF 32
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 97.1 bits (231), Expect = 6e-21
Identities = 44/45 (97%), Positives = 44/45 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 239
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 1 NRTSALVV-TWVGMCKR-FRGNDAPRAVF 81
+ +ALVV GMCK F G+DAPRAVF
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVF 32
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 97.1 bits (231), Expect = 6e-21
Identities = 44/45 (97%), Positives = 44/45 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 239
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 1 NRTSALVV-TWVGMCKR-FRGNDAPRAVF 81
+ +ALVV GMCK F G+DAPRAVF
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVF 32
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 91.5 bits (217), Expect = 3e-19
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +3
Query: 105 QXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 230
Q VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 42 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = +1
Query: 10 SALVV-TWVGMCKR-FRGNDAPRAVF 81
+ALVV GMCK F G+DAPRAVF
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVF 32
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 83.0 bits (196), Expect = 1e-16
Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 5/81 (6%)
Frame = +3
Query: 132 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEA 308
KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEP 112
Query: 309 PLKPKANREKMTQT----YGF 359
PL P +NREKM Q YGF
Sbjct: 113 PLNPNSNREKMFQVMFEQYGF 133
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 437 TLYASGRTTGIVLDSG 484
TLYA G TG+V+DSG
Sbjct: 145 TLYAQGLLTGVVVDSG 160
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 74.5 bits (175), Expect = 4e-14
Identities = 36/76 (47%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 111 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 287
V G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 288 PVLLTEAPLKPKANRE 335
LLTE PL NRE
Sbjct: 116 FFLLTEPPLNTPENRE 131
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 195 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANREKMTQ 347
++ G++ +W+ EKI H++ N L P EHPVL +E+ +A REK+T+
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTE 144
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.9 bits (84), Expect = 0.004
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Frame = +3
Query: 129 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 302
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 303 E----APLKPKANREKMTQTYGF 359
+ P P + E + +GF
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGF 120
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.9 bits (84), Expect = 0.004
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Frame = +3
Query: 129 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 302
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 303 E----APLKPKANREKMTQTYGF 359
+ P P + E + +GF
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGF 120
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical protein
F52B5.3 protein.
Length = 1425
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 408 PLPWGRGLLALETRSFRNHKSVSSSLC 328
PLPWG L L+ + N +SV +LC
Sbjct: 1142 PLPWGASLSLLKLDEWYNVRSVKKNLC 1168
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Frame = +2
Query: 104 PGRHGRHGSEGLLRR**G-TEQEGYPHTQIPH----RTRHRHQLGR 226
PGRHGRHGS R G + G PH H H H GR
Sbjct: 363 PGRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGR 408
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 189 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 290
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 189 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 290
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>Z68134-4|CAA92224.1| 567|Caenorhabditis elegans Hypothetical
protein T27A8.5 protein.
Length = 567
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -2
Query: 203 VFDGVFECEDTPLALCLITYVGVLLTHADHDXLGRV 96
+ +G+ EC DTP + + +T +H +GRV
Sbjct: 142 ILEGIVECSDTPSTALWNALIPMFMTDIEH-HIGRV 176
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 27.1 bits (57), Expect = 7.2
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 104 PGRHGRHGSEG 136
PGRHGRHG+ G
Sbjct: 114 PGRHGRHGAPG 124
>AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform c protein.
Length = 784
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 183 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRE 335
L Y + + N DM+ N +R A EE + + + P +PK++R+
Sbjct: 130 LLYANDQILEVNGLDMQNETKDNVVNAVRAAKEELQITVQQLPQRPKSSRK 180
>AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform a protein.
Length = 814
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 183 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRE 335
L Y + + N DM+ N +R A EE + + + P +PK++R+
Sbjct: 130 LLYANDQILEVNGLDMQNETKDNVVNAVRAAKEELQITVQQLPQRPKSSRK 180
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 183 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRE 335
L Y + + N DM+ N +R A EE + + + P +PK++R+
Sbjct: 169 LLYANDQILEVNGLDMQNETKDNVVNAVRAAKEELQITVQQLPQRPKSSRK 219
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 29 GSECASGFAGTTLPAPYSS--IVGRLVPGR 112
GS C SGF G +PAP I+G + GR
Sbjct: 348 GSTCLSGFMGMDIPAPAGPLWILGDVFIGR 377
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +3
Query: 216 NWDDMEKIWHHTFYNE--LRVAPEEHPV 293
+++D++ IWHH Y E L+ E +PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199
>Z68882-3|CAA93106.2| 568|Caenorhabditis elegans Hypothetical
protein C47E12.3 protein.
Length = 568
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -2
Query: 146 YVGVLLTHADHDXLGRVAPRSRNTARGASFPRNRL 42
Y G LLT A HD GR+ P TA G + R L
Sbjct: 173 YGGELLTLA-HDLAGRLLPAFDGTATGIPYTRINL 206
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 375 PKQANPVPMVAVRRIPGPVALHCTRPVVPP 464
P + P P V V IPGP + R VPP
Sbjct: 2180 PATSVPEPNVVVEPIPGPTSAREERNDVPP 2209
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 375 PKQANPVPMVAVRRIPGPVALHCTRPVVPP 464
P + P P V V IPGP + R VPP
Sbjct: 2202 PATSVPEPNVVVEPIPGPTSAREERNDVPP 2231
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 375 PKQANPVPMVAVRRIPGPVALHCTRPVVPP 464
P + P P V V IPGP + R VPP
Sbjct: 1993 PATSVPEPNVVVEPIPGPTSAREERNDVPP 2022
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 375 PKQANPVPMVAVRRIPGPVALHCTRPVVPP 464
P + P P V V IPGP + R VPP
Sbjct: 2300 PATSVPEPNVVVEPIPGPTSAREERNDVPP 2329
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 375 PKQANPVPMVAVRRIPGPVALHCTRPVVPP 464
P + P P V V IPGP + R VPP
Sbjct: 2180 PATSVPEPNVVVEPIPGPTSAREERNDVPP 2209
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 375 PKQANPVPMVAVRRIPGPVALHCTRPVVPP 464
P + P P V V IPGP + R VPP
Sbjct: 2202 PATSVPEPNVVVEPIPGPTSAREERNDVPP 2231
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 375 PKQANPVPMVAVRRIPGPVALHCTRPVVPP 464
P + P P V V IPGP + R VPP
Sbjct: 1993 PATSVPEPNVVVEPIPGPTSAREERNDVPP 2022
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 375 PKQANPVPMVAVRRIPGPVALHCTRPVVPP 464
P + P P V V IPGP + R VPP
Sbjct: 2300 PATSVPEPNVVVEPIPGPTSAREERNDVPP 2329
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 375 PKQANPVPMVAVRRIPGPVALHCTRPVVPP 464
P + P P V V IPGP + R VPP
Sbjct: 2011 PATSVPEPNVVVEPIPGPTSAREERNDVPP 2040
>U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protease
protein 6 protein.
Length = 389
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -2
Query: 368 VPSETISLCHLLSVGFGLEGSFGEQDWVLLGSYTQLIVEGVMPDLLHIVPVG 213
VP+ T + +S F + + D +L ++T L V+GV+P L++ + G
Sbjct: 157 VPTTTFGIASKISADFKNDAT----DGILGLAFTSLAVDGVVPPLINAINQG 204
>U23169-3|AAV58882.1| 284|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform c protein.
Length = 284
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 362 KERVSKASKPRPHGSGKAYPRAGGSTLYASGRTTGIVLD 478
KE+V++ P P G YPRA +A+G ++ D
Sbjct: 5 KEKVNREQPPMPTTDGVEYPRAAS---WAAGNCANVLND 40
>U23169-2|AAM98050.1| 290|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform b protein.
Length = 290
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 362 KERVSKASKPRPHGSGKAYPRAGGSTLYASGRTTGIVLD 478
KE+V++ P P G YPRA +A+G ++ D
Sbjct: 11 KEKVNREQPPMPTTDGVEYPRAAS---WAAGNCANVLND 46
>U23169-1|AAL02450.1| 363|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform a protein.
Length = 363
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 362 KERVSKASKPRPHGSGKAYPRAGGSTLYASGRTTGIVLD 478
KE+V++ P P G YPRA +A+G ++ D
Sbjct: 84 KEKVNREQPPMPTTDGVEYPRAAS---WAAGNCANVLND 119
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 375 PKQANPVPMVAVRRIPGPVALHCTRPVVPP 464
P + P P V V IPGP + R VPP
Sbjct: 1975 PATSVPEPNVVVEPIPGPTSAREERNDVPP 2004
>AC006709-1|AAF60432.2| 256|Caenorhabditis elegans Hypothetical
protein Y119C1A.1 protein.
Length = 256
Score = 26.6 bits (56), Expect = 9.5
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +2
Query: 173 YPHTQIPHRTRHRHQLGRYGEDLASHLLQ*AACSSRGAPSLAHRSSPQAQSQQREDDTDL 352
YPHT + + +L R L L + A S++G P P +S +E+ T
Sbjct: 153 YPHTLVNDAATNEEELERTVRKLEEKLKRLRAKSAKGVPP---PRPPPPRSISQENSTGP 209
Query: 353 WF--RKERVSKASKPRPH 400
W R R + ++ R H
Sbjct: 210 WICDRCSRENNSNSYRCH 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,675,102
Number of Sequences: 27780
Number of extensions: 292264
Number of successful extensions: 1108
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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