Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_C15
(329 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 67 1e-11
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 66 2e-11
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 66 2e-11
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 66 2e-11
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 66 2e-11
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 66 2e-11
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 66 2e-11
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 66 2e-11
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 66 2e-11
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 66 2e-11
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 63 2e-10
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 63 2e-10
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 63 2e-10
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 63 2e-10
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 63 2e-10
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 63 2e-10
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 56 3e-08
AL772197-5|CAM15087.1| 711|Homo sapiens chromosome X open readi... 31 0.86
AL772197-4|CAH71713.1| 682|Homo sapiens chromosome X open readi... 31 0.86
D50927-1|BAA09486.2| 801|Homo sapiens KIAA0137 protein protein. 29 2.6
AM080016-1|CAL04162.1| 100|Homo sapiens immunoglobulin heavy ch... 29 4.6
DQ840864-1|ABI74391.1| 119|Homo sapiens immunoglobulin heavy ch... 28 6.0
DQ840851-1|ABI74378.1| 119|Homo sapiens immunoglobulin heavy ch... 28 6.0
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 66.9 bits (156), Expect = 1e-11
Identities = 41/89 (46%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Frame = +2
Query: 77 PGLDGSHKLRECLRYDL-LRNRSSTA----HGMSA*L*SNVSSKWTGKCGLTHVPGGIMD 241
P G HKLRECL + LRNR A + + + +T+ P G MD
Sbjct: 11 PRPSGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITY-PAGFMD 69
Query: 242 VVSIEKTNELFRLIYDVKGRFTIHRITPE 328
V+SI+KT E FRLIYD KGRF +HRITPE
Sbjct: 70 VISIDKTGENFRLIYDTKGRFAVHRITPE 98
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 169 IVKQRLIKVDGKVRTD 216
I QR IK+DGKVRTD
Sbjct: 45 ICMQRFIKIDGKVRTD 60
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 89 GSHKLRECLRYDL-LRNRSSTA----HGMSA*L*SNVSSKWTGKCGLTHVPGGIMDVVSI 253
G HKLRECL + LRNR A + + + +T+ P G MDV+SI
Sbjct: 34 GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITY-PAGFMDVISI 92
Query: 254 EKTNELFRLIYDVKGRFTIHRITPE 328
+KT E FRLIYD KGRF +HRITPE
Sbjct: 93 DKTGENFRLIYDTKGRFAVHRITPE 117
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 67 RVSAGPRRVPQAARMLAL*SSAKSVKYRSRHECLIVKQRLIKVDGKVRTD 216
R S GP ++ + ++ + I QR IK+DGKVRTD
Sbjct: 30 RPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTD 79
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 89 GSHKLRECLRYDL-LRNRSSTA----HGMSA*L*SNVSSKWTGKCGLTHVPGGIMDVVSI 253
G HKLRECL + LRNR A + + + +T+ P G MDV+SI
Sbjct: 34 GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITY-PAGFMDVISI 92
Query: 254 EKTNELFRLIYDVKGRFTIHRITPE 328
+KT E FRLIYD KGRF +HRITPE
Sbjct: 93 DKTGENFRLIYDTKGRFAVHRITPE 117
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 67 RVSAGPRRVPQAARMLAL*SSAKSVKYRSRHECLIVKQRLIKVDGKVRTD 216
R S GP ++ + ++ + I QR IK+DGKVRTD
Sbjct: 30 RPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTD 79
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 89 GSHKLRECLRYDL-LRNRSSTA----HGMSA*L*SNVSSKWTGKCGLTHVPGGIMDVVSI 253
G HKLRECL + LRNR A + + + +T+ P G MDV+SI
Sbjct: 34 GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITY-PAGFMDVISI 92
Query: 254 EKTNELFRLIYDVKGRFTIHRITPE 328
+KT E FRLIYD KGRF +HRITPE
Sbjct: 93 DKTGENFRLIYDTKGRFAVHRITPE 117
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 67 RVSAGPRRVPQAARMLAL*SSAKSVKYRSRHECLIVKQRLIKVDGKVRTD 216
R S GP ++ + ++ + I QR IK+DGKVRTD
Sbjct: 30 RPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTD 79
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 89 GSHKLRECLRYDL-LRNRSSTA----HGMSA*L*SNVSSKWTGKCGLTHVPGGIMDVVSI 253
G HKLRECL + LRNR A + + + +T+ P G MDV+SI
Sbjct: 34 GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITY-PAGFMDVISI 92
Query: 254 EKTNELFRLIYDVKGRFTIHRITPE 328
+KT E FRLIYD KGRF +HRITPE
Sbjct: 93 DKTGENFRLIYDTKGRFAVHRITPE 117
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 67 RVSAGPRRVPQAARMLAL*SSAKSVKYRSRHECLIVKQRLIKVDGKVRTD 216
R S GP ++ + ++ + I QR IK+DGKVRTD
Sbjct: 30 RPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTD 79
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 89 GSHKLRECLRYDL-LRNRSSTA----HGMSA*L*SNVSSKWTGKCGLTHVPGGIMDVVSI 253
G HKLRECL + LRNR A + + + +T+ P G MDV+SI
Sbjct: 34 GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITY-PAGFMDVISI 92
Query: 254 EKTNELFRLIYDVKGRFTIHRITPE 328
+KT E FRLIYD KGRF +HRITPE
Sbjct: 93 DKTGENFRLIYDTKGRFAVHRITPE 117
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 67 RVSAGPRRVPQAARMLAL*SSAKSVKYRSRHECLIVKQRLIKVDGKVRTD 216
R S GP ++ + ++ + I QR IK+DGKVRTD
Sbjct: 30 RPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTD 79
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 89 GSHKLRECLRYDL-LRNRSSTA----HGMSA*L*SNVSSKWTGKCGLTHVPGGIMDVVSI 253
G HKLRECL + LRNR A + + + +T+ P G MDV+SI
Sbjct: 14 GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITY-PAGFMDVISI 72
Query: 254 EKTNELFRLIYDVKGRFTIHRITPE 328
+KT E FRLIYD KGRF +HRITPE
Sbjct: 73 DKTGENFRLIYDTKGRFAVHRITPE 97
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 67 RVSAGPRRVPQAARMLAL*SSAKSVKYRSRHECLIVKQRLIKVDGKVRTD 216
R S GP ++ + ++ + I QR IK+DGKVRTD
Sbjct: 10 RPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTD 59
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 89 GSHKLRECLRYDL-LRNRSSTA----HGMSA*L*SNVSSKWTGKCGLTHVPGGIMDVVSI 253
G HKLRECL + LRNR A + + + +T+ P G MDV+SI
Sbjct: 34 GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITY-PAGFMDVISI 92
Query: 254 EKTNELFRLIYDVKGRFTIHRITPE 328
+KT E FRLIYD KGRF +HRITPE
Sbjct: 93 DKTGENFRLIYDTKGRFAVHRITPE 117
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 67 RVSAGPRRVPQAARMLAL*SSAKSVKYRSRHECLIVKQRLIKVDGKVRTD 216
R S GP ++ + ++ + I QR IK+DGKVRTD
Sbjct: 30 RPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTD 79
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 89 GSHKLRECLRYDL-LRNRSSTA----HGMSA*L*SNVSSKWTGKCGLTHVPGGIMDVVSI 253
G HKLRECL + LRNR A + + + +T+ P G MDV+SI
Sbjct: 34 GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITY-PAGFMDVISI 92
Query: 254 EKTNELFRLIYDVKGRFTIHRITPE 328
+KT E FRLIYD KGRF +HRITPE
Sbjct: 93 DKTGENFRLIYDTKGRFAVHRITPE 117
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 169 IVKQRLIKVDGKVRTD 216
I QR IK+DGKVRTD
Sbjct: 64 ICMQRFIKIDGKVRTD 79
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 89 GSHKLRECLRYDL-LRNRSSTA----HGMSA*L*SNVSSKWTGKCGLTHVPGGIMDVVSI 253
G HKLRECL + LRNR A + + + +T+ P G MDV+SI
Sbjct: 34 GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITY-PAGFMDVISI 92
Query: 254 EKTNELFRLIYDVKGRFTIHRITPE 328
+KT E FRLIYD KGRF +HRITPE
Sbjct: 93 DKTGENFRLIYDTKGRFAVHRITPE 117
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 67 RVSAGPRRVPQAARMLAL*SSAKSVKYRSRHECLIVKQRLIKVDGKVRTD 216
R S GP ++ + ++ + I QR IK+DGKVRTD
Sbjct: 30 RPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTD 79
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 63.3 bits (147), Expect = 2e-10
Identities = 41/84 (48%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Frame = +2
Query: 89 GSHKLRECLRYDL-LRNRSSTA--HGMSA*L*SNVSSKWTGKCGL-THVPGGIMDVVSIE 256
G HKLRECL + LRNR A + K GK + P G MDV+SIE
Sbjct: 34 GPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIE 93
Query: 257 KTNELFRLIYDVKGRFTIHRITPE 328
KT E FRL+YD KGRF +HRIT E
Sbjct: 94 KTGEHFRLVYDTKGRFAVHRITVE 117
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 67 RVSAGPRRVPQAARMLAL*SSAKSVKYRSRHECLIVKQRLIKVDGKVRTD 216
R S GP ++ + ++ + I QR IK+DGKVR D
Sbjct: 30 RPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVD 79
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 63.3 bits (147), Expect = 2e-10
Identities = 41/84 (48%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Frame = +2
Query: 89 GSHKLRECLRYDL-LRNRSSTA--HGMSA*L*SNVSSKWTGKCGL-THVPGGIMDVVSIE 256
G HKLRECL + LRNR A + K GK + P G MDV+SIE
Sbjct: 33 GPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIE 92
Query: 257 KTNELFRLIYDVKGRFTIHRITPE 328
KT E FRL+YD KGRF +HRIT E
Sbjct: 93 KTGEHFRLVYDTKGRFAVHRITVE 116
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 67 RVSAGPRRVPQAARMLAL*SSAKSVKYRSRHECLIVKQRLIKVDGKVRTD 216
R S GP ++ + ++ + I QR IK+DGKVR D
Sbjct: 29 RPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVD 78
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 63.3 bits (147), Expect = 2e-10
Identities = 41/84 (48%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Frame = +2
Query: 89 GSHKLRECLRYDL-LRNRSSTA--HGMSA*L*SNVSSKWTGKCGL-THVPGGIMDVVSIE 256
G HKLRECL + LRNR A + K GK + P G MDV+SIE
Sbjct: 34 GPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIE 93
Query: 257 KTNELFRLIYDVKGRFTIHRITPE 328
KT E FRL+YD KGRF +HRIT E
Sbjct: 94 KTGEHFRLVYDTKGRFAVHRITVE 117
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 67 RVSAGPRRVPQAARMLAL*SSAKSVKYRSRHECLIVKQRLIKVDGKVRTD 216
R S GP ++ + ++ + I QR IK+DGKVR D
Sbjct: 30 RPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVD 79
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 63.3 bits (147), Expect = 2e-10
Identities = 41/84 (48%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Frame = +2
Query: 89 GSHKLRECLRYDL-LRNRSSTA--HGMSA*L*SNVSSKWTGKCGL-THVPGGIMDVVSIE 256
G HKLRECL + LRNR A + K GK + P G MDV+SIE
Sbjct: 34 GPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIE 93
Query: 257 KTNELFRLIYDVKGRFTIHRITPE 328
KT E FRL+YD KGRF +HRIT E
Sbjct: 94 KTGEHFRLVYDTKGRFAVHRITVE 117
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 67 RVSAGPRRVPQAARMLAL*SSAKSVKYRSRHECLIVKQRLIKVDGKVRTD 216
R S GP ++ + ++ + I QR IK+DGKVR D
Sbjct: 30 RPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVD 79
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 63.3 bits (147), Expect = 2e-10
Identities = 41/84 (48%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Frame = +2
Query: 89 GSHKLRECLRYDL-LRNRSSTA--HGMSA*L*SNVSSKWTGKCGL-THVPGGIMDVVSIE 256
G HKLRECL + LRNR A + K GK + P G MDV+SIE
Sbjct: 34 GPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIE 93
Query: 257 KTNELFRLIYDVKGRFTIHRITPE 328
KT E FRL+YD KGRF +HRIT E
Sbjct: 94 KTGEHFRLVYDTKGRFAVHRITVE 117
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 67 RVSAGPRRVPQAARMLAL*SSAKSVKYRSRHECLIVKQRLIKVDGKVRTD 216
R S GP ++ + ++ + I QR IK+DGKVR D
Sbjct: 30 RPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVD 79
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 63.3 bits (147), Expect = 2e-10
Identities = 41/84 (48%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Frame = +2
Query: 89 GSHKLRECLRYDL-LRNRSSTA--HGMSA*L*SNVSSKWTGKCGL-THVPGGIMDVVSIE 256
G HKLRECL + LRNR A + K GK + P G MDV+SIE
Sbjct: 34 GPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIE 93
Query: 257 KTNELFRLIYDVKGRFTIHRITPE 328
KT E FRL+YD KGRF +HRIT E
Sbjct: 94 KTGEHFRLVYDTKGRFAVHRITVE 117
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 67 RVSAGPRRVPQAARMLAL*SSAKSVKYRSRHECLIVKQRLIKVDGKVRTD 216
R S GP ++ + ++ + I QR IK+DGKVR D
Sbjct: 30 RPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVD 79
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 56.0 bits (129), Expect = 3e-08
Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +2
Query: 89 GSHKLRECLRYDL-LRNRSSTA--HGMSA*L*SNVSSKWTGKCGLTHV-PGGIMDVVSIE 256
G HKLRECL + LRNR A + K GK + P G +DV+SIE
Sbjct: 34 GPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDGKVRVDITYPAGFIDVISIE 93
Query: 257 KTNELFRLIYDVKGRFTIHRITPE 328
KT E FRL+Y+ KG F +HRIT E
Sbjct: 94 KTGEHFRLVYNTKGCFAVHRITVE 117
>AL772197-5|CAM15087.1| 711|Homo sapiens chromosome X open reading
frame 23 protein.
Length = 711
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 13 RWRENLSVKPLSMDVDSWRVSAGPRRVPQAARMLAL*SSAKSVKYRSRHE 162
+W+ S+ P D D W + GP+ A R SSA V Y RH+
Sbjct: 237 KWKPEHSLPPYQEDTDQWNL--GPQTYRHAEREHPETSSATKVSYDYRHK 284
>AL772197-4|CAH71713.1| 682|Homo sapiens chromosome X open reading
frame 23 protein.
Length = 682
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 13 RWRENLSVKPLSMDVDSWRVSAGPRRVPQAARMLAL*SSAKSVKYRSRHE 162
+W+ S+ P D D W + GP+ A R SSA V Y RH+
Sbjct: 237 KWKPEHSLPPYQEDTDQWNL--GPQTYRHAEREHPETSSATKVSYDYRHK 284
>D50927-1|BAA09486.2| 801|Homo sapiens KIAA0137 protein protein.
Length = 801
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 158 CRERYLTDFAEDHSASIRAACGTRRGPADTRQLSTSMLRG 39
CR R F E S++++ G+ GP QLSTS G
Sbjct: 22 CRRRGGVGFPESSLMSVQSSSGSLEGPPSWSQLSTSPTPG 61
>AM080016-1|CAL04162.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 212 LTHVPG-GIMDVVSIEKTNELFRLIYDVKGRFTIHR 316
L PG G+ V I++T ++ VKGRFTI R
Sbjct: 40 LRQAPGKGLQWVAGIKRTGQIISSADSVKGRFTISR 75
>DQ840864-1|ABI74391.1| 119|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 119
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 185 SSKWTGKCGLTHVPG-GIMDVVSIEKTNELFRLIYDVKGRFTIHR 316
SS W + VPG G+ V +I++ L++ VKGRFTI R
Sbjct: 30 SSHWMS--WVRQVPGKGLEWVANIKEDGSEKDLVHSVKGRFTISR 72
>DQ840851-1|ABI74378.1| 119|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 119
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 185 SSKWTGKCGLTHVPG-GIMDVVSIEKTNELFRLIYDVKGRFTIHR 316
SS W + VPG G+ V +I++ L++ VKGRFTI R
Sbjct: 30 SSHWMS--WVRQVPGKGLEWVANIKEDGSEKDLVHSVKGRFTISR 72
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,685,922
Number of Sequences: 237096
Number of extensions: 1096625
Number of successful extensions: 3648
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3633
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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