Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_C11
         (517 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.1  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   4.3  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   5.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   5.7  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   5.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   5.7  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 265 WYRRAVNKRIQQCTITRTMPTQPMATITKASPMAMVIPH 381
           W R  VN+++    ++  +  +P   + K  PM  V+PH
Sbjct: 128 WARFNVNEQMYLYALSVAVIHRPDTKLMKLPPMYEVMPH 166


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 265 WYRRAVNKRIQQCTITRTMPTQPMATITKASPMAMVIPH 381
           W R  VN+++    ++  +  +P   + K  PM  V+PH
Sbjct: 128 WARFNVNEQMYLYALSVAVIHRPDTKLMKLPPMYEVMPH 166


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +3

Query: 399 QSPQGYASPYSGQSVQTYPTN 461
           Q   GYASP S  S   Y  N
Sbjct: 127 QHNNGYASPMSTSSYDPYSPN 147


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 52  VSCMPLFFPRTRXSLQL 102
           VS +  F+ RT+ SLQL
Sbjct: 73  VSALSSFYDRTKMSLQL 89


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/18 (50%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = +1

Query: 241 HWLLTELAWYRRAV-NKR 291
           HW+ T   W RR V NK+
Sbjct: 175 HWIWTPHGWMRRNVLNKQ 192


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 52  VSCMPLFFPRTRXSLQL 102
           VS +  F+ RT+ SLQL
Sbjct: 88  VSALSSFYDRTKMSLQL 104


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 4    RGRERERSXMNHEKPCVSCM 63
            RG+ER+RS      P  + M
Sbjct: 1245 RGQERQRSLFKDSSPATALM 1264


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,602
Number of Sequences: 438
Number of extensions: 2902
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)