Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_C09
         (628 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    25   1.5  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   2.6  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   3.4  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   3.4  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   6.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   7.9  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   7.9  

>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +2

Query: 482 HCNMYIYIYICNVIDGASRTLHHNMFDYPSYFFNKIYHLSIC 607
           H    +YIY  N     S  L   +F   +Y    +Y+LS C
Sbjct: 285 HAQRLVYIYGVNTNHQPSDPLILKLFIITTYISGILYYLSTC 326


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +2

Query: 230 RRTCPSTSRSGSPPTCAPTPEGRRSRSA-SSITGRSC-PETRASPTPSHTLSYR 385
           RRT P T  + +    A  PEGRR R A +    R C P  R +P P+ T   R
Sbjct: 474 RRTIPPTRVAAA----AAAPEGRRRRRAIARARRRRCRPRARRNP-PATTRPVR 522


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 245 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETR 349
           S   SG+P T  PTP+     + SS T  S  + R
Sbjct: 405 SNGGSGAPATAKPTPKPIPKPAPSSETNGSSSQER 439


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 245 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETR 349
           S   SG+P T  PTP+     + SS T  S  + R
Sbjct: 405 SNGGSGAPATAKPTPKPIPKPAPSSETNGSSSQER 439


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
 Frame = +2

Query: 179  GTCSRSRKSPAHPCSW*RRT-CPSTSRSGSPPTCAPTPEGRRSRSASSITGRS---CPET 346
            G+ SRSR       +  R++   S SRSGS  +        RSRS S    RS       
Sbjct: 1125 GSRSRSRSRSRSQSAGSRKSGSRSRSRSGSQASRGSRRSRSRSRSRSGSRSRSRSGSGSR 1184

Query: 347  RASPTPSHTLSYRKQE 394
            +ASP    ++S  + E
Sbjct: 1185 QASPISRKSVSGSESE 1200


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 277 RSNTGGQAFPQCVFDHWQILPGDPCE 354
           + N  G+   +C   +W I+ G+ CE
Sbjct: 912 KPNVIGRTCNECKNGYWNIVSGNGCE 937


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +2

Query: 230 RRTCPSTSRSGSPPTCAPTPEGRRSRSASSIT-GRSCPETRASPTP 364
           RR  P +   G  P+C   P  RRSRS    +  RS P ++    P
Sbjct: 258 RRRSPRSG--GRWPSCRSPPARRRSRSTRPTSWPRSRPTSKPKRLP 301


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,543
Number of Sequences: 2352
Number of extensions: 15758
Number of successful extensions: 43
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)