Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_C09
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 270 4e-73
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 270 4e-73
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 143 8e-35
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 143 8e-35
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 71 9e-13
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 33 0.17
AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical... 33 0.17
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 33 0.17
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 31 0.89
AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical... 31 0.89
U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog (... 30 1.2
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 30 1.2
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 30 1.2
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 29 2.7
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 29 2.7
DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related ... 29 2.7
DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related ... 29 2.7
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 29 2.7
AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeti... 29 2.7
AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeti... 29 2.7
U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily ass... 29 3.6
Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z69636-2|CAA93463.3| 247|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 28 4.8
U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical pr... 28 4.8
U97004-5|AAO26009.1| 240|Caenorhabditis elegans Hypothetical pr... 28 4.8
U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily as... 28 4.8
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass... 28 4.8
U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily ass... 28 4.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical ... 28 6.3
AF040650-3|ABE73333.1| 836|Caenorhabditis elegans Hypothetical ... 28 6.3
AF040650-2|AAT81190.1| 939|Caenorhabditis elegans Hypothetical ... 28 6.3
AF040650-1|AAB95011.1| 952|Caenorhabditis elegans Hypothetical ... 28 6.3
AF003740-1|AAM15561.2| 488|Caenorhabditis elegans Hypothetical ... 28 6.3
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 28 6.3
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 28 6.3
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 27 8.3
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 27 8.3
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 27 8.3
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 27 8.3
U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center... 27 8.3
U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center... 27 8.3
U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center... 27 8.3
U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center... 27 8.3
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 27 8.3
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 27 8.3
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 270 bits (663), Expect = 4e-73
Identities = 122/147 (82%), Positives = 132/147 (89%)
Frame = +1
Query: 10 DAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 189
DAIHRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYGVLNRRRGHVF
Sbjct: 706 DAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVF 765
Query: 190 EESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPCEPNSKP 369
EESQV GTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQ+LPGDP E +KP
Sbjct: 766 EESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKP 825
Query: 370 YVVVQETRKRKGLKEGLPDLNQYLDKL 450
+V +TRKRKGLKEG+P L+ YLDK+
Sbjct: 826 NQIVLDTRKRKGLKEGVPALDNYLDKM 852
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 270 bits (663), Expect = 4e-73
Identities = 122/147 (82%), Positives = 132/147 (89%)
Frame = +1
Query: 10 DAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 189
DAIHRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYGVLNRRRGHVF
Sbjct: 706 DAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVF 765
Query: 190 EESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPCEPNSKP 369
EESQV GTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQ+LPGDP E +KP
Sbjct: 766 EESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKP 825
Query: 370 YVVVQETRKRKGLKEGLPDLNQYLDKL 450
+V +TRKRKGLKEG+P L+ YLDK+
Sbjct: 826 NQIVLDTRKRKGLKEGVPALDNYLDKM 852
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 143 bits (347), Expect = 8e-35
Identities = 69/157 (43%), Positives = 99/157 (63%), Gaps = 12/157 (7%)
Frame = +1
Query: 10 DAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 189
+ ++RGGGQ+IPT RRC Y+ L A PRLMEP Y E+ P V +Y VL +RRGHV
Sbjct: 803 EPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVT 862
Query: 190 EESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPCEPN--- 360
++ + G+PM+ + AY+PV +SFGF DLR +T GQAF F HWQ++PGDP + +
Sbjct: 863 TDAPMPGSPMYTISAYIPVMDSFGFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKSIVI 922
Query: 361 ------SKPYVVVQ---ETRKRKGLKEGLPDLNQYLD 444
P++ + +TR+RKGL E + +N++ D
Sbjct: 923 KTLDVQPTPHLAREFMIKTRRRKGLSEDV-SVNKFFD 958
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 143 bits (347), Expect = 8e-35
Identities = 69/157 (43%), Positives = 99/157 (63%), Gaps = 12/157 (7%)
Frame = +1
Query: 10 DAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 189
+ ++RGGGQ+IPT RRC Y+ L A PRLMEP Y E+ P V +Y VL +RRGHV
Sbjct: 678 EPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVT 737
Query: 190 EESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPCEPN--- 360
++ + G+PM+ + AY+PV +SFGF DLR +T GQAF F HWQ++PGDP + +
Sbjct: 738 TDAPMPGSPMYTISAYIPVMDSFGFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKSIVI 797
Query: 361 ------SKPYVVVQ---ETRKRKGLKEGLPDLNQYLD 444
P++ + +TR+RKGL E + +N++ D
Sbjct: 798 KTLDVQPTPHLAREFMIKTRRRKGLSEDV-SVNKFFD 833
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical protein
K10C3.5a protein.
Length = 894
Score = 70.5 bits (165), Expect = 9e-13
Identities = 36/107 (33%), Positives = 53/107 (49%)
Frame = +1
Query: 28 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 207
GGQ++ + A RL+ +Y C + A+G ++ VL++R+ V E
Sbjct: 732 GGQMMTAIKASCSAAAKKLALRLVAAMYRCTVTTASQALGKVHAVLSQRKSKVLSEDINE 791
Query: 208 GTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDP 348
T +F V + +PV ESF F LR T G A Q F HWQ++ DP
Sbjct: 792 ATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDP 838
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = +1
Query: 184 VFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDP 348
V E T +F V + +PV ESF F LR T G A Q F HWQ++ DP
Sbjct: 595 VLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDP 649
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 34.7 bits (76), Expect = 0.055
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +1
Query: 94 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTAD 273
L+EP+ E P G + L +R + G + +A P+++ FG+T++
Sbjct: 642 LLEPIMKVEATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSE 699
Query: 274 LRSNTGGQ 297
LRS T G+
Sbjct: 700 LRSLTEGK 707
>Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 188 SRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCP-ETRASPTP 364
+R SP H S RR P R+ SPP +P+ R +R A I P E R SP P
Sbjct: 211 ARGNDSPLHRSSAARRHSPPPRRA-SPPRRTSSPK-RDARPAREIRDSREPREVRRSPPP 268
Query: 365 SHTLSYRK 388
S RK
Sbjct: 269 RRAASPRK 276
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 188 SRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCP-ETRASPTP 364
+R SP H S RR P R+ SPP +P+ R +R A I P E R SP P
Sbjct: 211 ARGNDSPLHRSSAARRHSPPPRRA-SPPRRTSSPK-RDARPAREIRDSREPREVRRSPPP 268
Query: 365 SHTLSYRK 388
S RK
Sbjct: 269 RRAASPRK 276
>AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 188 SRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCP-ETRASPTP 364
+R SP H S RR P R+ SPP +P+ R +R A I P E R SP P
Sbjct: 211 ARGNDSPLHRSSAARRHSPPPRRA-SPPRRTSSPK-RDARPAREIRDSREPREVRRSPPP 268
Query: 365 SHTLSYRK 388
S RK
Sbjct: 269 RRAASPRK 276
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 188 SRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCP-ETRASPTP 364
+R SP H S RR P R+ SPP +P+ R +R A I P E R SP P
Sbjct: 211 ARGNDSPLHRSSAARRHSPPPRRA-SPPRRTSSPK-RDARPAREIRDSREPREVRRSPPP 268
Query: 365 SHTLSYRK 388
S RK
Sbjct: 269 RRAASPRK 276
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 30.7 bits (66), Expect = 0.89
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 233 RTCPSTSRSGSPPTCAPTPEGRRSRSASSI-TGRSCPETRASPTPSHT 373
RT +T + SPPT TP RS +A ++ T ++ P T + T T
Sbjct: 145 RTISTTETTTSPPTTTVTPRTTRSSTARTVATTKTSPSTLRTTTKPPT 192
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 30.7 bits (66), Expect = 0.89
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = +2
Query: 188 SRSRKSPA---HPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASS---ITGRSCPETR 349
+R R+SP+ P + RR PS SRS +P P RRS SAS R+ ++
Sbjct: 373 ARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSK 432
Query: 350 ASPTPSHTLSYRKQERGKA*RKVSP 424
+ P P S + + R+ SP
Sbjct: 433 SPPAPRRRRSPSQSKSPAPRRRRSP 457
>AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical
protein Y73B3A.5 protein.
Length = 310
Score = 30.7 bits (66), Expect = 0.89
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 167 TDGAGTCSRSRKSPAHP-CSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPE 343
TD T S S SP CS S + S +P T +P E R+ R S ++ + P
Sbjct: 117 TDSPTTHSVSTPSPTDSVCS----PSSSVASSATPSTSSPVDESRQCRKRS-LSSSTTPS 171
Query: 344 TRASPTP 364
T A P P
Sbjct: 172 TTAPPQP 178
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +2
Query: 230 RRTCPS--TSRSGSPPTCAP-TPEGRRSRSASSITGRSCPETRASPTPSHT 373
R PS TS PP P P G SA S+ G P T + TPS T
Sbjct: 81 RHEIPSFMTSLQAPPPPPPPQNPRGNTDFSALSLLGTDSPTTHSVSTPSPT 131
>U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform b protein.
Length = 1069
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 311 HCGNACPPVLERRSAVNPNDSLTGRYAFTTNMGVPA 204
HC A P++E + N +D+L RY T G+PA
Sbjct: 490 HC-LAAMPLVENDCSANKDDALFSRYLHTKQRGIPA 524
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +2
Query: 245 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPSHTLSYRKQERGKA*RKVSP 424
S+S+ PP+ +P+ GRR R +++ S A+ TP+ R + K P
Sbjct: 503 SSSKMPPPPSPSPSTPGRRGRRPRTLSTMSMEPAAAAVTPAPRGRPRSRSAAKVSENTEP 562
Query: 425 I 427
+
Sbjct: 563 L 563
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = +1
Query: 28 GGQIIPT-----TRRCLYACLLTAQPRLMEPVYLCEIQCP-EVAVGGIYGVLNRRRGHVF 189
GG+I P ++C+ L + + L EPV +I+ + I L RRR H
Sbjct: 565 GGKINPALLSACAQKCVSEALSSGEMVLTEPVMEVQIEIRNDDPTQPILNELLRRRAHFE 624
Query: 190 EESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGG 294
T + + A LP++E+ + +R+ T G
Sbjct: 625 HSDATESTEIRRICAILPLSETENLSKTVRTLTSG 659
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +2
Query: 230 RRTCPS--TSRSGSPPTCAP--TPEGRRSRSASSITGRSCPETRASPTPSHT 373
R PS TS PP P P G SA S+ G P T + TPS T
Sbjct: 175 RHEIPSFMTSLQAPPPPPPPPQNPRGNTDFSALSLLGTDSPTTHSVSTPSPT 226
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +2
Query: 230 RRTCPS--TSRSGSPPTCAP--TPEGRRSRSASSITGRSCPETRASPTPSHT 373
R PS TS PP P P G SA S+ G P T + TPS T
Sbjct: 175 RHEIPSFMTSLQAPPPPPPPPQNPRGNTDFSALSLLGTDSPTTHSVSTPSPT 226
>DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related
alternative variant b protein.
Length = 482
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 245 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPT 361
S RSG PP A TP G+ SR A + P+ A+PT
Sbjct: 409 SVDRSGQPPISASTP-GKASR-ADLFNRLATPKVTATPT 445
>DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related
alternative variant a protein.
Length = 507
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 245 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPT 361
S RSG PP A TP G+ SR A + P+ A+PT
Sbjct: 409 SVDRSGQPPISASTP-GKASR-ADLFNRLATPKVTATPT 445
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +2
Query: 230 RRTCPS--TSRSGSPPTCAP--TPEGRRSRSASSITGRSCPETRASPTPSHT 373
R PS TS PP P P G SA S+ G P T + TPS T
Sbjct: 175 RHEIPSFMTSLQAPPPPPPPPQNPRGNTDFSALSLLGTDSPTTHSVSTPSPT 226
>AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform b
protein.
Length = 482
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 245 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPT 361
S RSG PP A TP G+ SR A + P+ A+PT
Sbjct: 409 SVDRSGQPPISASTP-GKASR-ADLFNRLATPKVTATPT 445
>AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform a
protein.
Length = 507
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 245 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPT 361
S RSG PP A TP G+ SR A + P+ A+PT
Sbjct: 409 SVDRSGQPPISASTP-GKASR-ADLFNRLATPKVTATPT 445
>U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily
assigned gene nameprotein 150, isoform b protein.
Length = 638
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 266 PPTCAPTPE--GRRSRSASSITGRSCPETRASPTPSHTLSYRKQER 397
PP TPE +++ S + + + P TP+ TLS R++ R
Sbjct: 195 PPVQVVTPEKKSKKNSSKNELDSKDVPSCSGESTPAGTLSPRRETR 240
>Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical
protein F58B3.5 protein.
Length = 917
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 272 TCAPTPEGRRSRSASSITGRSCPETRASPTPSHTLSYRKQERGKA*RKVSPI 427
+C PTP + ++ IT E ++P PS ++Q++GK +P+
Sbjct: 702 SCTPTPTS--TPASGIITEAPKKEAPSTPAPSEPKKAKEQKKGKGGAAAAPV 751
>Z69636-2|CAA93463.3| 247|Caenorhabditis elegans Hypothetical
protein F20B10.3 protein.
Length = 247
Score = 28.3 bits (60), Expect = 4.8
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = -3
Query: 353 SHGSPGRICQ*SKTHCGNACPPVLERRSAVNPNDSLTGRYAFTTNMGVPATCDSSNTCPR 174
S G+ G Q S GN PV + V D+ Y TT M +P SSNT P
Sbjct: 85 STGNCGVTQQASACSTGNCNGPVAGSANVVPVFDASI--YTTTTPMPIPIRTISSNTAPI 142
Query: 173 RLFSTP 156
++ P
Sbjct: 143 KVIRVP 148
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical protein
F22E10.2 protein.
Length = 1324
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 28 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRR 174
G Q + T RCL A +L + +M + + + A G ++ ++NR+
Sbjct: 1017 GDQTVDKTFRCLMAMMLCCEGIIMSAQFFPQFVGAKSAAGQMFNLINRQ 1065
>U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical
protein R08E5.2c protein.
Length = 304
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 57 MPVRVSVDRAA--QAYGTRVPLRDPVSGGGG 143
MP +SV+R A +AYG V L DP G G
Sbjct: 98 MPATMSVERRAMLRAYGAEVILSDPAEGHPG 128
>U97004-5|AAO26009.1| 240|Caenorhabditis elegans Hypothetical
protein R08E5.2b protein.
Length = 240
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 57 MPVRVSVDRAA--QAYGTRVPLRDPVSGGGG 143
MP +SV+R A +AYG V L DP G G
Sbjct: 1 MPATMSVERRAMLRAYGAEVILSDPAEGHPG 31
>U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical
protein R08E5.2a protein.
Length = 337
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 57 MPVRVSVDRAA--QAYGTRVPLRDPVSGGGG 143
MP +SV+R A +AYG V L DP G G
Sbjct: 98 MPATMSVERRAMLRAYGAEVILSDPAEGHPG 128
>U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform d protein.
Length = 664
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +2
Query: 278 APTPEGRRSRSASSITGRSC----PETRASPTPSHTLSYRKQERG 400
A TP GR S++ RS P +RA+P P H L Y ERG
Sbjct: 571 AETP-GRYFPENSAVLERSSTPSFPVSRATPLPFHPLLYNNGERG 614
>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform a protein.
Length = 1112
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +2
Query: 278 APTPEGRRSRSASSITGRSC----PETRASPTPSHTLSYRKQERG 400
A TP GR S++ RS P +RA+P P H L Y ERG
Sbjct: 571 AETP-GRYFPENSAVLERSSTPSFPVSRATPLPFHPLLYNNGERG 614
>U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform c protein.
Length = 949
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +2
Query: 278 APTPEGRRSRSASSITGRSC----PETRASPTPSHTLSYRKQERG 400
A TP GR S++ RS P +RA+P P H L Y ERG
Sbjct: 571 AETP-GRYFPENSAVLERSSTPSFPVSRATPLPFHPLLYNNGERG 614
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = +2
Query: 194 SRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTP 364
S P P R P + PP P+P+ R R+ S R+ P T SP P
Sbjct: 136 SSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIP 192
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 251 SRSGSPPTCAPTPEGRRSRSASSITGRSCP 340
SRS SPP +P+P+ RR S S +G + P
Sbjct: 253 SRSNSPPNRSPSPKKRRDNS-SPRSGSASP 281
>AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical
protein Y73F8A.5 protein.
Length = 1019
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 242 PSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRAS 355
P TS G C P G S S GR CPE++ S
Sbjct: 273 PGTSSPGGSAECIPCSPGSFSSKGSGQCGR-CPESQYS 309
>AF040650-3|ABE73333.1| 836|Caenorhabditis elegans Hypothetical
protein T04B8.5c protein.
Length = 836
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 112 LCEIQCP-EVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNT 288
LC I V GG+Y +++R G F G FV + GFT L +N
Sbjct: 20 LCAISSNGAVEGGGVYYMISRSLGPEF--GGAIGVLFFVANVFSCALYISGFTEALMNNI 77
Query: 289 GGQAFP 306
G FP
Sbjct: 78 GNGQFP 83
>AF040650-2|AAT81190.1| 939|Caenorhabditis elegans Hypothetical
protein T04B8.5b protein.
Length = 939
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 112 LCEIQCP-EVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNT 288
LC I V GG+Y +++R G F G FV + GFT L +N
Sbjct: 123 LCAISSNGAVEGGGVYYMISRSLGPEF--GGAIGVLFFVANVFSCALYISGFTEALMNNI 180
Query: 289 GGQAFP 306
G FP
Sbjct: 181 GNGQFP 186
>AF040650-1|AAB95011.1| 952|Caenorhabditis elegans Hypothetical
protein T04B8.5a protein.
Length = 952
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 112 LCEIQCP-EVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNT 288
LC I V GG+Y +++R G F G FV + GFT L +N
Sbjct: 136 LCAISSNGAVEGGGVYYMISRSLGPEF--GGAIGVLFFVANVFSCALYISGFTEALMNNI 193
Query: 289 GGQAFP 306
G FP
Sbjct: 194 GNGQFP 199
>AF003740-1|AAM15561.2| 488|Caenorhabditis elegans Hypothetical
protein C41D11.3 protein.
Length = 488
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 263 SPPTCAPTPE-GRRSRSASSITGRSCPETRASPTPSHTLSYR 385
SP TP RRSRS+ S S ET S TPS +LS R
Sbjct: 408 SPTKYPVTPVYTRRSRSSLSDIRESTSETTGSITPSTSLSER 449
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 27.9 bits (59), Expect = 6.3
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Frame = +2
Query: 161 C*TDGAGTCSRSRKSPAHPCSW*R----RTCPSTSRSGSPPTCAPTPEGRRSRSASSITG 328
C D CS SP P + T STS + + PT PTP R + SA +I
Sbjct: 219 CFEDNHKDCSSGSTSPTCPKNATAVASVTTTASTSTTKTSPTKPPTPTSRPT-SAPTIPP 277
Query: 329 RSCPETRASPTPSHTLSYRKQER 397
+ + +P TLS + R
Sbjct: 278 QPSANSTRAPDIGKTLSTQPPRR 300
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Frame = +2
Query: 95 LWNPCTFAXXXXXXXXXXXXTAC*TDGAGTCSRSRKSPAHPCSW*RRTCPSTSRSGSPP- 271
L N C T C +DG G C K+ P + R C + P
Sbjct: 884 LQNNCPINYDCTLNALTQEHTCCGSDGQGVCPSGEKAFMDPRTNSPRQCAMAADGKCPGG 943
Query: 272 -TCAPTPEGRRSRSASSITGRSCPETRA 352
C + + +I G CP R+
Sbjct: 944 YLCRFSQSNHKYYCCGNIQGSMCPSGRS 971
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 27.5 bits (58), Expect = 8.3
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -2
Query: 198 RLLEHVPAPSVQHAVDTTDRHLRTLDLAK-VHGFHKPGLRGQQTRVQASPSRWNDLTATS 22
+ L PA S + + + RT AK V KP L G R SPS + T S
Sbjct: 384 KTLNPKPAGSTRSVTPVSTKPPRTFGTAKSVIVSSKPSLSGYNNRANPSPSMSDLRTTKS 443
Query: 21 VNGVTS 4
+ G T+
Sbjct: 444 MAGSTT 449
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 343 DPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 450
D PN+ Y+V R R+G + LPD+ ++KL
Sbjct: 665 DKGPPNTLFYIVRDVVRVRQGYRFKLPDIGLVIEKL 700
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 343 DPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 450
D PN+ Y+V R R+G + LPD+ ++KL
Sbjct: 705 DKGPPNTLFYIVRDVVRVRQGYRFKLPDIGLVIEKL 740
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 343 DPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 450
D PN+ Y+V R R+G + LPD+ ++KL
Sbjct: 766 DKGPPNTLFYIVRDVVRVRQGYRFKLPDIGLVIEKL 801
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 343 DPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 450
D PN+ Y+V R R+G + LPD+ ++KL
Sbjct: 665 DKGPPNTLFYIVRDVVRVRQGYRFKLPDIGLVIEKL 700
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 343 DPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 450
D PN+ Y+V R R+G + LPD+ ++KL
Sbjct: 705 DKGPPNTLFYIVRDVVRVRQGYRFKLPDIGLVIEKL 740
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 343 DPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 450
D PN+ Y+V R R+G + LPD+ ++KL
Sbjct: 766 DKGPPNTLFYIVRDVVRVRQGYRFKLPDIGLVIEKL 801
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 236 TCPSTSRSGSPPTCAPTPEGRRSRSAS-SITGRSCPETRASPTPSHT 373
T PST+ + + T TP+ S S S S T + T A+ TP T
Sbjct: 602 TVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPT 648
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 236 TCPSTSRSGSPPTCAPTPEGRRSRSAS-SITGRSCPETRASPTPSHT 373
T PST+ + + T TP+ S S S S T + T A+ TP T
Sbjct: 602 TVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPT 648
>U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center
kinase family protein1, isoform d protein.
Length = 638
Score = 27.5 bits (58), Expect = 8.3
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = -2
Query: 363 GVGL-ARVSGQDLPVIEDALRERLPSGVGAQVGGEPERL-VDGQVRLHH----EHGCAGD 202
G GL S Q+ DA+R+R P G G ++ + Q L+H +G
Sbjct: 491 GSGLNGNSSNQNHSEYSDAVRQRGPGGSGGRLDYRESHVPTSSQENLNHGRMYGYGAPPP 550
Query: 201 LRLLEHVPAPSVQHAVD 151
R +VP P V+ A+D
Sbjct: 551 SREANNVPMPRVKGALD 567
>U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center
kinase family protein1, isoform b protein.
Length = 651
Score = 27.5 bits (58), Expect = 8.3
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = -2
Query: 363 GVGL-ARVSGQDLPVIEDALRERLPSGVGAQVGGEPERL-VDGQVRLHH----EHGCAGD 202
G GL S Q+ DA+R+R P G G ++ + Q L+H +G
Sbjct: 504 GSGLNGNSSNQNHSEYSDAVRQRGPGGSGGRLDYRESHVPTSSQENLNHGRMYGYGAPPP 563
Query: 201 LRLLEHVPAPSVQHAVD 151
R +VP P V+ A+D
Sbjct: 564 SREANNVPMPRVKGALD 580
>U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center
kinase family protein1, isoform c protein.
Length = 650
Score = 27.5 bits (58), Expect = 8.3
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = -2
Query: 363 GVGL-ARVSGQDLPVIEDALRERLPSGVGAQVGGEPERL-VDGQVRLHH----EHGCAGD 202
G GL S Q+ DA+R+R P G G ++ + Q L+H +G
Sbjct: 503 GSGLNGNSSNQNHSEYSDAVRQRGPGGSGGRLDYRESHVPTSSQENLNHGRMYGYGAPPP 562
Query: 201 LRLLEHVPAPSVQHAVD 151
R +VP P V+ A+D
Sbjct: 563 SREANNVPMPRVKGALD 579
>U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center
kinase family protein1, isoform a protein.
Length = 653
Score = 27.5 bits (58), Expect = 8.3
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = -2
Query: 363 GVGL-ARVSGQDLPVIEDALRERLPSGVGAQVGGEPERL-VDGQVRLHH----EHGCAGD 202
G GL S Q+ DA+R+R P G G ++ + Q L+H +G
Sbjct: 506 GSGLNGNSSNQNHSEYSDAVRQRGPGGSGGRLDYRESHVPTSSQENLNHGRMYGYGAPPP 565
Query: 201 LRLLEHVPAPSVQHAVD 151
R +VP P V+ A+D
Sbjct: 566 SREANNVPMPRVKGALD 582
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 242 PSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPSHTLSY 382
P + G PP A T GRR +TG S PE R P P++ L++
Sbjct: 491 PFKGQFGGPPIIA-TINGRRHEIR--LTG-SAPEVRIEPEPAYHLTH 533
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 343 DPCEPNSKPYVVVQETRKRKGLKEGLPDLNQYLDKL 450
D PN+ Y+V R R+G + LPD+ ++KL
Sbjct: 705 DKGPPNTLFYIVRDVVRVRQGYRFKLPDIGLVIEKL 740
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,244,525
Number of Sequences: 27780
Number of extensions: 343372
Number of successful extensions: 1437
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1435
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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