Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_C08
         (307 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...    79   1e-15
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...    79   1e-15
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...    79   1e-15
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...    79   1e-15
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...    79   1e-15
AY119103-1|AAM50963.1|  853|Drosophila melanogaster RE06730p pro...    27   4.5  
AE014297-2882|AAF55818.1|  853|Drosophila melanogaster CG3822-PA...    27   4.5  

>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score = 79.0 bits (186), Expect = 1e-15
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPNYIRIQRQKAVLQR 307
           LFEKR KNF IGQ++QP RDLSRFVRWP YIR+QRQKAVLQ+
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQK 77


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score = 79.0 bits (186), Expect = 1e-15
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPNYIRIQRQKAVLQR 307
           LFEKR KNF IGQ++QP RDLSRFVRWP YIR+QRQKAVLQ+
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQK 77


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score = 79.0 bits (186), Expect = 1e-15
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPNYIRIQRQKAVLQR 307
           LFEKR KNF IGQ++QP RDLSRFVRWP YIR+QRQKAVLQ+
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQK 77


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score = 79.0 bits (186), Expect = 1e-15
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPNYIRIQRQKAVLQR 307
           LFEKR KNF IGQ++QP RDLSRFVRWP YIR+QRQKAVLQ+
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQK 77


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score = 79.0 bits (186), Expect = 1e-15
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPNYIRIQRQKAVLQR 307
           LFEKR KNF IGQ++QP RDLSRFVRWP YIR+QRQKAVLQ+
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQK 77


>AY119103-1|AAM50963.1|  853|Drosophila melanogaster RE06730p
           protein.
          Length = 853

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 222 TSSQPEIYPVSCDGRTIFASSVKRLCY 302
           TS Q +I+P+SCDG++ +      + Y
Sbjct: 320 TSQQIDIHPISCDGQSTWQHGFSLINY 346


>AE014297-2882|AAF55818.1|  853|Drosophila melanogaster CG3822-PA
           protein.
          Length = 853

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 222 TSSQPEIYPVSCDGRTIFASSVKRLCY 302
           TS Q +I+P+SCDG++ +      + Y
Sbjct: 320 TSQQIDIHPISCDGQSTWQHGFSLINY 346


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,766,062
Number of Sequences: 53049
Number of extensions: 181084
Number of successful extensions: 331
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 331
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)