Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_C07
         (162 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   1.0  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       20   2.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   2.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              19   4.2  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    19   5.6  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 6   HTLLLKLQKYYCASLKLYNGAVELTHLT 89
           HTL L   K      +L+NG   L  LT
Sbjct: 386 HTLELSDNKLRTVGAQLFNGLFVLNRLT 413


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +2

Query: 11  SAPQTTEVLLREFETV*WRS*INTFNA 91
           S PQT    L     V W S   TFNA
Sbjct: 168 SLPQTIVFHLETHPNVTWYSQCVTFNA 194


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +2

Query: 74  INTFNAAAESTGSCYSSCMLSYAQH 148
           I  FN +     SC  S    Y++H
Sbjct: 366 IRNFNESENRRNSCLGSTETYYSKH 390


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 8/37 (21%), Positives = 13/37 (35%)
 Frame = -2

Query: 158 YIVHAGRNSAYNXXXXXXXXXXXX*MC*FNCAIIQFQ 48
           Y+ HA + + Y              +  +NC  I  Q
Sbjct: 666 YVSHANQRNMYKLDLKNMKYTRSADLSSYNCVPINVQ 702


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 86  NAAAESTGSCYSSCMLSYAQHA 151
           N A    G+C S+   +Y  HA
Sbjct: 114 NWAQNKAGACGSAITTAYRIHA 135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,725
Number of Sequences: 438
Number of extensions: 243
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 33
effective length of database: 131,889
effective search space used:  2637780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)