Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_C06
         (507 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL136382-2|CAI23514.1|  636|Homo sapiens novel protein protein.        30   4.0  
AL136382-1|CAI23513.1|  620|Homo sapiens novel protein protein.        30   4.0  
AB033055-1|BAA86543.1|  696|Homo sapiens KIAA1229 protein protein.     30   4.0  
AF411210-1|AAM22616.1|  429|Homo sapiens p49 MGR protein.              29   7.1  

>AL136382-2|CAI23514.1|  636|Homo sapiens novel protein protein.
          Length = 636

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 124 QKLQKQEERVR-YCSNLLHFNNFYYSLEEQKNVSGIPADMNIHWK 255
           QKLQ+  E V+  C NLLH NN   +  + KNV  +   M  H K
Sbjct: 420 QKLQEAAEIVKSRCENLLHKNN-QITKTKNKNVEKMRGQMESHLK 463


>AL136382-1|CAI23513.1|  620|Homo sapiens novel protein protein.
          Length = 620

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 124 QKLQKQEERVR-YCSNLLHFNNFYYSLEEQKNVSGIPADMNIHWK 255
           QKLQ+  E V+  C NLLH NN   +  + KNV  +   M  H K
Sbjct: 391 QKLQEAAEIVKSRCENLLHKNN-QITKTKNKNVEKMRGQMESHLK 434


>AB033055-1|BAA86543.1|  696|Homo sapiens KIAA1229 protein protein.
          Length = 696

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 124 QKLQKQEERVR-YCSNLLHFNNFYYSLEEQKNVSGIPADMNIHWK 255
           QKLQ+  E V+  C NLLH NN   +  + KNV  +   M  H K
Sbjct: 480 QKLQEAAEIVKSRCENLLHKNN-QITKTKNKNVEKMRGQMESHLK 523


>AF411210-1|AAM22616.1|  429|Homo sapiens p49 MGR protein.
          Length = 429

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 19/77 (24%), Positives = 35/77 (45%)
 Frame = +1

Query: 73  IIFVTVIAINANPVLTRQKLQKQEERVRYCSNLLHFNNFYYSLEEQKNVSGIPADMNIHW 252
           I  +T  A+   P + + +LQ +  + R        NNF Y+LE  K++   P D  + +
Sbjct: 26  ISILTSSALVLKPQMLKGELQTRPSQ-RPSRKAFRRNNFEYTLEASKSLRQKPGDSTMTY 84

Query: 253 KTGNIFFTLISEEMKMS 303
                F+ +  +E+  S
Sbjct: 85  LNKGQFYPITLKEVSSS 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,992,297
Number of Sequences: 237096
Number of extensions: 1165822
Number of successful extensions: 7548
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7548
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)