Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_C05
(241 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 120 1e-27
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 120 1e-27
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 120 1e-27
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 120 1e-27
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 120 1e-27
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 120 1e-27
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 120 1e-27
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 120 1e-27
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 120 1e-27
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 120 1e-27
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 120 1e-27
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 120 1e-27
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 120 1e-27
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 112 2e-25
BC101026-1|AAI01027.1| 490|Homo sapiens SASS6 protein protein. 28 4.6
AY359522-1|AAQ57128.1| 657|Homo sapiens hypothetical protein DK... 28 4.6
AL834265-1|CAD38940.1| 505|Homo sapiens hypothetical protein pr... 28 4.6
AL445928-1|CAH72248.1| 657|Homo sapiens novel protein protein. 28 4.6
AF378754-1|AAL11991.1| 2063|Homo sapiens tumor endothelial marke... 28 6.1
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 120 bits (288), Expect = 1e-27
Identities = 50/79 (63%), Positives = 67/79 (84%)
Frame = +2
Query: 5 RVEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRV 184
R+E++PELPLVV D V+ KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+
Sbjct: 143 RIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRI 202
Query: 185 QRKGPLIIYNKDKGLTRAF 241
QR+GP IIYN+D G+ +AF
Sbjct: 203 QRRGPCIIYNEDNGIIKAF 221
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 1e-27
Identities = 50/79 (63%), Positives = 67/79 (84%)
Frame = +2
Query: 5 RVEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRV 184
R+E++PELPLVV D V+ KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+
Sbjct: 143 RIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRI 202
Query: 185 QRKGPLIIYNKDKGLTRAF 241
QR+GP IIYN+D G+ +AF
Sbjct: 203 QRRGPCIIYNEDNGIIKAF 221
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 1e-27
Identities = 50/79 (63%), Positives = 67/79 (84%)
Frame = +2
Query: 5 RVEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRV 184
R+E++PELPLVV D V+ KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+
Sbjct: 143 RIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRI 202
Query: 185 QRKGPLIIYNKDKGLTRAF 241
QR+GP IIYN+D G+ +AF
Sbjct: 203 QRRGPCIIYNEDNGIIKAF 221
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 1e-27
Identities = 50/79 (63%), Positives = 67/79 (84%)
Frame = +2
Query: 5 RVEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRV 184
R+E++PELPLVV D V+ KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+
Sbjct: 143 RIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRI 202
Query: 185 QRKGPLIIYNKDKGLTRAF 241
QR+GP IIYN+D G+ +AF
Sbjct: 203 QRRGPCIIYNEDNGIIKAF 221
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 1e-27
Identities = 50/79 (63%), Positives = 67/79 (84%)
Frame = +2
Query: 5 RVEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRV 184
R+E++PELPLVV D V+ KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+
Sbjct: 143 RIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRI 202
Query: 185 QRKGPLIIYNKDKGLTRAF 241
QR+GP IIYN+D G+ +AF
Sbjct: 203 QRRGPCIIYNEDNGIIKAF 221
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 1e-27
Identities = 50/79 (63%), Positives = 67/79 (84%)
Frame = +2
Query: 5 RVEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRV 184
R+E++PELPLVV D V+ KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+
Sbjct: 143 RIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRI 202
Query: 185 QRKGPLIIYNKDKGLTRAF 241
QR+GP IIYN+D G+ +AF
Sbjct: 203 QRRGPCIIYNEDNGIIKAF 221
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 1e-27
Identities = 50/79 (63%), Positives = 67/79 (84%)
Frame = +2
Query: 5 RVEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRV 184
R+E++PELPLVV D V+ KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+
Sbjct: 143 RIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRI 202
Query: 185 QRKGPLIIYNKDKGLTRAF 241
QR+GP IIYN+D G+ +AF
Sbjct: 203 QRRGPCIIYNEDNGIIKAF 221
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 1e-27
Identities = 50/79 (63%), Positives = 67/79 (84%)
Frame = +2
Query: 5 RVEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRV 184
R+E++PELPLVV D V+ KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+
Sbjct: 143 RIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRI 202
Query: 185 QRKGPLIIYNKDKGLTRAF 241
QR+GP IIYN+D G+ +AF
Sbjct: 203 QRRGPCIIYNEDNGIIKAF 221
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 1e-27
Identities = 50/79 (63%), Positives = 67/79 (84%)
Frame = +2
Query: 5 RVEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRV 184
R+E++PELPLVV D V+ KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+
Sbjct: 143 RIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRI 202
Query: 185 QRKGPLIIYNKDKGLTRAF 241
QR+GP IIYN+D G+ +AF
Sbjct: 203 QRRGPCIIYNEDNGIIKAF 221
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 1e-27
Identities = 50/79 (63%), Positives = 67/79 (84%)
Frame = +2
Query: 5 RVEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRV 184
R+E++PELPLVV D V+ KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+
Sbjct: 143 RIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRI 202
Query: 185 QRKGPLIIYNKDKGLTRAF 241
QR+GP IIYN+D G+ +AF
Sbjct: 203 QRRGPCIIYNEDNGIIKAF 221
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 120 bits (288), Expect = 1e-27
Identities = 50/79 (63%), Positives = 67/79 (84%)
Frame = +2
Query: 5 RVEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRV 184
R+E++PELPLVV D V+ KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+
Sbjct: 143 RIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRI 202
Query: 185 QRKGPLIIYNKDKGLTRAF 241
QR+GP IIYN+D G+ +AF
Sbjct: 203 QRRGPCIIYNEDNGIIKAF 221
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 120 bits (288), Expect = 1e-27
Identities = 50/79 (63%), Positives = 67/79 (84%)
Frame = +2
Query: 5 RVEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRV 184
R+E++PELPLVV D V+ KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+
Sbjct: 157 RIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRI 216
Query: 185 QRKGPLIIYNKDKGLTRAF 241
QR+GP IIYN+D G+ +AF
Sbjct: 217 QRRGPCIIYNEDNGIIKAF 235
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 1e-27
Identities = 50/79 (63%), Positives = 67/79 (84%)
Frame = +2
Query: 5 RVEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRV 184
R+E++PELPLVV D V+ KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRNRRR+
Sbjct: 143 RIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRI 202
Query: 185 QRKGPLIIYNKDKGLTRAF 241
QR+GP IIYN+D G+ +AF
Sbjct: 203 QRRGPCIIYNEDNGIIKAF 221
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 112 bits (269), Expect = 2e-25
Identities = 49/79 (62%), Positives = 65/79 (82%)
Frame = +2
Query: 5 RVEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRV 184
R+E+ PELPLVV D V+ KTK+AV+ L+++ AW+D+ KVY SQR+RAGKGKMRN RR+
Sbjct: 143 RIEEFPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN-RRI 201
Query: 185 QRKGPLIIYNKDKGLTRAF 241
QR+GP IIYN+D G+ +AF
Sbjct: 202 QRRGPCIIYNEDNGIIKAF 220
>BC101026-1|AAI01027.1| 490|Homo sapiens SASS6 protein protein.
Length = 490
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 17 IPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMR-NRRRVQRK 193
I EL +S +E+ +TKQ V+ LRR N+ DV K + + + K+ + ++ K
Sbjct: 108 IRELKAKLSGVEEELQRTKQEVLSLRRENSTLDVECHEKEKHVNQLQTKVAVLEQEIKDK 167
Query: 194 GPLIIYNKD 220
L++ K+
Sbjct: 168 DQLVLRTKE 176
>AY359522-1|AAQ57128.1| 657|Homo sapiens hypothetical protein
DKFZp761A078 protein.
Length = 657
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 17 IPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMR-NRRRVQRK 193
I EL +S +E+ +TKQ V+ LRR N+ DV K + + + K+ + ++ K
Sbjct: 275 IRELKAKLSGVEEELQRTKQEVLSLRRENSTLDVECHEKEKHVNQLQTKVAVLEQEIKDK 334
Query: 194 GPLIIYNKD 220
L++ K+
Sbjct: 335 DQLVLRTKE 343
>AL834265-1|CAD38940.1| 505|Homo sapiens hypothetical protein
protein.
Length = 505
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 17 IPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMR-NRRRVQRK 193
I EL +S +E+ +TKQ V+ LRR N+ DV K + + + K+ + ++ K
Sbjct: 123 IRELKAKLSGVEEELQRTKQEVLSLRRENSTLDVECHEKEKHVNQLQTKVAVLEQEIKDK 182
Query: 194 GPLIIYNKD 220
L++ K+
Sbjct: 183 DQLVLRTKE 191
>AL445928-1|CAH72248.1| 657|Homo sapiens novel protein protein.
Length = 657
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 17 IPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMR-NRRRVQRK 193
I EL +S +E+ +TKQ V+ LRR N+ DV K + + + K+ + ++ K
Sbjct: 275 IRELKAKLSGVEEELQRTKQEVLSLRRENSTLDVECHEKEKHVNQLQTKVAVLEQEIKDK 334
Query: 194 GPLIIYNKD 220
L++ K+
Sbjct: 335 DQLVLRTKE 343
>AF378754-1|AAL11991.1| 2063|Homo sapiens tumor endothelial marker 4
protein.
Length = 2063
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 125 VYKSQRLRAGKGKMRNRRRVQRKGP 199
VY+S AG+G +R++ R + KGP
Sbjct: 415 VYRSPSFGAGEGLLRSQARTRAKGP 439
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,624,789
Number of Sequences: 237096
Number of extensions: 473995
Number of successful extensions: 1004
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 76,859,062
effective HSP length: 58
effective length of database: 63,107,494
effective search space used: 1325257374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -