Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_C05
(241 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 116 3e-27
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 116 3e-27
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 116 3e-27
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 116 3e-27
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 56 7e-09
AY061121-1|AAL28669.1| 316|Drosophila melanogaster LD10431p pro... 28 2.0
AF279258-1|AAG02080.1| 316|Drosophila melanogaster transmembran... 28 2.0
AF265296-1|AAF75771.1| 316|Drosophila melanogaster putative mul... 28 2.0
AE014296-2778|AAN11736.2| 316|Drosophila melanogaster CG3971-PB... 28 2.0
AE014296-2777|AAF49430.2| 316|Drosophila melanogaster CG3971-PA... 28 2.0
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 116 bits (280), Expect = 3e-27
Identities = 49/78 (62%), Positives = 66/78 (84%)
Frame = +2
Query: 8 VEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQ 187
++ + E PLVVSD VQ++ KTKQAVIFLRR+ W+D+ KVYKSQR RAG+G MR+RRR+
Sbjct: 147 IDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIA 206
Query: 188 RKGPLIIYNKDKGLTRAF 241
R+GPL++Y+KD+GL +AF
Sbjct: 207 RRGPLVVYDKDEGLRKAF 224
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 116 bits (280), Expect = 3e-27
Identities = 49/78 (62%), Positives = 66/78 (84%)
Frame = +2
Query: 8 VEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQ 187
++ + E PLVVSD VQ++ KTKQAVIFLRR+ W+D+ KVYKSQR RAG+G MR+RRR+
Sbjct: 147 IDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIA 206
Query: 188 RKGPLIIYNKDKGLTRAF 241
R+GPL++Y+KD+GL +AF
Sbjct: 207 RRGPLVVYDKDEGLRKAF 224
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 116 bits (280), Expect = 3e-27
Identities = 49/78 (62%), Positives = 66/78 (84%)
Frame = +2
Query: 8 VEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQ 187
++ + E PLVVSD VQ++ KTKQAVIFLRR+ W+D+ KVYKSQR RAG+G MR+RRR+
Sbjct: 147 IDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIA 206
Query: 188 RKGPLIIYNKDKGLTRAF 241
R+GPL++Y+KD+GL +AF
Sbjct: 207 RRGPLVVYDKDEGLRKAF 224
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 116 bits (280), Expect = 3e-27
Identities = 49/78 (62%), Positives = 66/78 (84%)
Frame = +2
Query: 8 VEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQ 187
++ + E PLVVSD VQ++ KTKQAVIFLRR+ W+D+ KVYKSQR RAG+G MR+RRR+
Sbjct: 147 IDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIA 206
Query: 188 RKGPLIIYNKDKGLTRAF 241
R+GPL++Y+KD+GL +AF
Sbjct: 207 RRGPLVVYDKDEGLRKAF 224
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 56.0 bits (129), Expect = 7e-09
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 8 VEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLK 124
++ + E PLVVSD VQ++ KTKQAVIFLRR+ W+D+ K
Sbjct: 85 IDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 123
>AY061121-1|AAL28669.1| 316|Drosophila melanogaster LD10431p
protein.
Length = 316
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 152 GKGKMRNRRRVQRKGPLIIYN 214
G+ M+NR R Q +GPLII+N
Sbjct: 52 GQHFMQNRPRFQLRGPLIIWN 72
>AF279258-1|AAG02080.1| 316|Drosophila melanogaster transmembrane
protein Noa protein.
Length = 316
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 152 GKGKMRNRRRVQRKGPLIIYN 214
G+ M+NR R Q +GPLII+N
Sbjct: 52 GQHFMQNRPRFQLRGPLIIWN 72
>AF265296-1|AAF75771.1| 316|Drosophila melanogaster putative
multipass transmembrane protein.
Length = 316
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 152 GKGKMRNRRRVQRKGPLIIYN 214
G+ M+NR R Q +GPLII+N
Sbjct: 52 GQHFMQNRPRFQLRGPLIIWN 72
>AE014296-2778|AAN11736.2| 316|Drosophila melanogaster CG3971-PB,
isoform B protein.
Length = 316
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 152 GKGKMRNRRRVQRKGPLIIYN 214
G+ M+NR R Q +GPLII+N
Sbjct: 52 GQHFMQNRPRFQLRGPLIIWN 72
>AE014296-2777|AAF49430.2| 316|Drosophila melanogaster CG3971-PA,
isoform A protein.
Length = 316
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 152 GKGKMRNRRRVQRKGPLIIYN 214
G+ M+NR R Q +GPLII+N
Sbjct: 52 GQHFMQNRPRFQLRGPLIIWN 72
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,577,331
Number of Sequences: 53049
Number of extensions: 152462
Number of successful extensions: 269
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 24,988,368
effective HSP length: 59
effective length of database: 21,858,477
effective search space used: 437169540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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