Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_C05
         (241 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   1.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   2.8  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    20   3.7  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    20   3.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              19   6.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    19   6.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    19   8.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    19   8.5  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    19   8.5  

>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 1.2
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = -2

Query: 117 TSDHALIRLRK--MTACLVLLISWT 49
           +S  A IR+ K  +T C + ++SWT
Sbjct: 264 SSQSAEIRIAKAAITICFLYVLSWT 288


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 11  EKIPELPLVVSDNVQEINKTKQAVIFLRRI 100
           EK+ +L  + SDN +E+N  K+    + R+
Sbjct: 73  EKLNQLE-IESDNSKEVNDKKEENFIVDRL 101


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 20.2 bits (40), Expect = 3.7
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +2

Query: 71  KQAVIFLRRINAWSDVLKVYKSQRLRAGKGKMRNRRRVQ 187
           +Q      +IN+W +V+  Y+      G GK    ++ Q
Sbjct: 144 RQTKAIANKINSWDNVVVAYEPV-WAIGTGKTATPQQAQ 181


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 20.2 bits (40), Expect = 3.7
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 8   VEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQRLRA-GKGKMRNR 175
           ++   ++ L+VSD+  E  K  ++ + + R +     L VYKS+     G  K +N+
Sbjct: 161 LQAFKQVQLLVSDSDVESYKQIKSDLDVLRQSVEKSELWVYKSKASEEHGNKKKKNK 217


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.4 bits (38), Expect = 6.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 152 RHAGAVICT 126
           RHAG  +CT
Sbjct: 651 RHAGEYVCT 659


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 19.4 bits (38), Expect = 6.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 51  TLSETTNGNSGI 16
           T+ E T+GN+GI
Sbjct: 100 TIIEPTSGNTGI 111


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 38  VSDNVQEINKTKQAVIFLR 94
           +SD V    KT Q + F+R
Sbjct: 269 ISDFVGSCRKTDQILYFIR 287


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 38  VSDNVQEINKTKQAVIFLR 94
           +SD V    KT Q + F+R
Sbjct: 307 ISDFVGSCRKTDQILYFIR 325


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +2

Query: 8   VEKIPELPLVVSDNVQEINKTKQAVIFLRRINAWSDVLKVYKSQ 139
           ++   ++ L+VSD+  E  K  ++ + + R +     L VYKS+
Sbjct: 129 LQAFKQVQLLVSDSDVESYKQIKSDLDVLRQSVEKSELWVYKSK 172


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,006
Number of Sequences: 438
Number of extensions: 976
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4024224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)