Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_C03
         (526 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL133380-5|CAI23047.1|  482|Homo sapiens mixed lineage kinase 4 ...    29   10.0 
AL133380-4|CAI23046.1| 1036|Homo sapiens mixed lineage kinase 4 ...    29   10.0 
AJ311798-1|CAC84640.1| 1036|Homo sapiens mixed lineage kinase 4b...    29   10.0 
AB058707-1|BAB47433.1|  490|Homo sapiens KIAA1804 protein protein.     29   10.0 

>AL133380-5|CAI23047.1|  482|Homo sapiens mixed lineage kinase 4
           (KIAA1804) protein.
          Length = 482

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +2

Query: 62  CGAALYCAAETRRVPATRRRVSISSPNPPG-SLSFPLHDSPLPTGVAAAPRHPYL 223
           CG   YCA+   R    RR +S  +P P G ++      S LP   + AP H +L
Sbjct: 320 CGNVPYCASSKHRPSHHRRTMSDGNPTPTGATIISATGASALPLCPSPAP-HSHL 373


>AL133380-4|CAI23046.1| 1036|Homo sapiens mixed lineage kinase 4
            (KIAA1804) protein.
          Length = 1036

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +2

Query: 62   CGAALYCAAETRRVPATRRRVSISSPNPPG-SLSFPLHDSPLPTGVAAAPRHPYL 223
            CG   YCA+   R    RR +S  +P P G ++      S LP   + AP H +L
Sbjct: 874  CGNVPYCASSKHRPSHHRRTMSDGNPTPTGATIISATGASALPLCPSPAP-HSHL 927


>AJ311798-1|CAC84640.1| 1036|Homo sapiens mixed lineage kinase 4beta
            protein.
          Length = 1036

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +2

Query: 62   CGAALYCAAETRRVPATRRRVSISSPNPPG-SLSFPLHDSPLPTGVAAAPRHPYL 223
            CG   YCA+   R    RR +S  +P P G ++      S LP   + AP H +L
Sbjct: 874  CGNVPYCASSKHRPSHHRRTMSDGNPTPTGATIISATGASALPLCPSPAP-HSHL 927


>AB058707-1|BAB47433.1|  490|Homo sapiens KIAA1804 protein protein.
          Length = 490

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +2

Query: 62  CGAALYCAAETRRVPATRRRVSISSPNPPG-SLSFPLHDSPLPTGVAAAPRHPYL 223
           CG   YCA+   R    RR +S  +P P G ++      S LP   + AP H +L
Sbjct: 328 CGNVPYCASSKHRPSHHRRTMSDGNPTPTGATIISATGASALPLCPSPAP-HSHL 381


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,403,306
Number of Sequences: 237096
Number of extensions: 908948
Number of successful extensions: 6656
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6656
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)