Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_C03
         (526 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3504|AAF46928.2| 1711|Drosophila melanogaster CG3820-PA...    29   3.9  
BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p pro...    28   6.7  
AY069587-1|AAL39732.2|  639|Drosophila melanogaster LD33388p pro...    28   6.7  
AY058785-1|AAL14014.1| 1068|Drosophila melanogaster SD08329p pro...    28   6.7  
AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA...    28   6.7  
AE014296-109|AAN11444.1| 1340|Drosophila melanogaster CG17090-PB...    28   6.7  
AE014296-108|AAF47392.2| 1340|Drosophila melanogaster CG17090-PA...    28   6.7  

>AE013599-3504|AAF46928.2| 1711|Drosophila melanogaster CG3820-PA
            protein.
          Length = 1711

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 22/47 (46%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 71   ALYCAAETRRVPATRRRVSISSPNPPGS-LSFPLHDSPLPTGVAAAP 208
            A+  AA T  VPAT      SS   PGS  SF    S L  G AAAP
Sbjct: 1283 AVVPAAVTAAVPATSSTTVTSSTAVPGSAFSFSNAFSTLSAGGAAAP 1329


>BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p
           protein.
          Length = 592

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 90  SAAQYSAAPHHTAPRPNKPTAKRISTPR 7
           S   +   PHH  P+P KP      TPR
Sbjct: 422 SQTSHHQHPHHHQPKPTKPEGSGEQTPR 449


>AY069587-1|AAL39732.2|  639|Drosophila melanogaster LD33388p
           protein.
          Length = 639

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 134 SPNPPGSLSFPLHDSPLPTGVAAAPRHPYLYVNNHYK 244
           S  PPGS+  P    P P+ VA  P H + + ++H++
Sbjct: 494 SQPPPGSVGLPGSTQPPPSSVAPHPHH-HSHGHHHHQ 529


>AY058785-1|AAL14014.1| 1068|Drosophila melanogaster SD08329p protein.
          Length = 1068

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 134  SPNPPGSLSFPLHDSPLPTGVAAAPRHPYLYVNNHYK 244
            S  PPGS+  P    P P+ VA  P H + + ++H++
Sbjct: 924  SQPPPGSVGLPGSTQPPPSSVAPHPHH-HSHGHHHHQ 959


>AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA
           protein.
          Length = 594

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 90  SAAQYSAAPHHTAPRPNKPTAKRISTPR 7
           S   +   PHH  P+P KP      TPR
Sbjct: 424 SQTSHHQHPHHHQPKPTKPEGSGEQTPR 451


>AE014296-109|AAN11444.1| 1340|Drosophila melanogaster CG17090-PB,
            isoform B protein.
          Length = 1340

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 134  SPNPPGSLSFPLHDSPLPTGVAAAPRHPYLYVNNHYK 244
            S  PPGS+  P    P P+ VA  P H + + ++H++
Sbjct: 1195 SQPPPGSVGLPGSTQPPPSSVAPHPHH-HSHGHHHHQ 1230


>AE014296-108|AAF47392.2| 1340|Drosophila melanogaster CG17090-PA,
            isoform A protein.
          Length = 1340

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 134  SPNPPGSLSFPLHDSPLPTGVAAAPRHPYLYVNNHYK 244
            S  PPGS+  P    P P+ VA  P H + + ++H++
Sbjct: 1195 SQPPPGSVGLPGSTQPPPSSVAPHPHH-HSHGHHHHQ 1230


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,203,456
Number of Sequences: 53049
Number of extensions: 294619
Number of successful extensions: 948
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)