Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_C03
         (526 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    24   0.83 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    24   0.83 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.9  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   5.8  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   5.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.7  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   7.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.7  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 0.83
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +2

Query: 125 SISSPNPPGSLSFPLHDSPLPTGVAAAPRHPYLYVNNH 238
           S S PN PGS +   H + L T  +   +    Y  NH
Sbjct: 64  SPSGPNSPGSFTAGCHSNLLSTSPSGQNKAVAPYPPNH 101


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 0.83
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +2

Query: 125 SISSPNPPGSLSFPLHDSPLPTGVAAAPRHPYLYVNNH 238
           S S PN PGS +   H + L T  +   +    Y  NH
Sbjct: 64  SPSGPNSPGSFTAGCHSNLLSTSPSGQNKAVAPYPPNH 101


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +2

Query: 119 RVSIS-SPNPPGSLSFPLHDSPLPTGVAAAPRHP 217
           R S+S +P PP    F   DSP  +G+ +    P
Sbjct: 556 RASLSKTPQPPQCPRFRKLDSPSDSGIESGTEKP 589


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 51  PRPNKPTAKRISTPRAE 1
           PRP  P  +R + P+AE
Sbjct: 53  PRPPHPRLRREAEPKAE 69


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 155 LSFPLHDSPLPTGV 196
           LS PLH + LP GV
Sbjct: 357 LSHPLHGNLLPPGV 370


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 140 NPPGSLSFPLHDSPLPTG 193
           N  G +S+   D P+PTG
Sbjct: 276 NDMGEVSYVSLDHPIPTG 293


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 4   GTRCRYSFCGRFV 42
           GT+C  S  GRF+
Sbjct: 409 GTKCDVSLLGRFI 421


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 140 NPPGSLSFPLHDSPLPTG 193
           N  G +S+   D P+PTG
Sbjct: 276 NDMGEVSYVSLDHPIPTG 293


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,010
Number of Sequences: 438
Number of extensions: 1728
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)