Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_C02
         (95 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    19   7.1  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    19   7.1  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    19   7.1  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    19   7.1  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    19   7.1  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    19   7.1  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    19   7.1  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    19   7.1  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    19   7.1  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    19   7.1  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    19   7.1  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    19   7.1  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    19   7.1  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    19   7.1  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    19   7.1  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    19   7.1  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    19   7.1  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    19   7.1  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    19   7.1  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    19   7.1  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    19   7.1  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    19   7.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    18   9.4  

>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 67  NYKYANGSN 41
           NYKY+N +N
Sbjct: 88  NYKYSNYNN 96


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 67  NYKYANGSN 41
           NYKY+N +N
Sbjct: 88  NYKYSNYNN 96


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 67  NYKYANGSNRVFK 29
           NY Y+N +N  +K
Sbjct: 88  NYNYSNYNNNNYK 100


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 67  NYKYANGSNRVFK 29
           NY Y+N +N  +K
Sbjct: 88  NYNYSNYNNNNYK 100


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 67  NYKYANGSNRVFK 29
           NY Y+N +N  +K
Sbjct: 88  NYNYSNYNNNNYK 100


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 67  NYKYANGSNRVFK 29
           NY Y+N +N  +K
Sbjct: 88  NYNYSNYNNNNYK 100


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 67  NYKYANGSNRVFK 29
           NY Y+N +N  +K
Sbjct: 88  NYNYSNYNNNNYK 100


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 67  NYKYANGSNRVFK 29
           NY Y+N +N  +K
Sbjct: 88  NYNYSNYNNNNYK 100


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 67  NYKYANGSN 41
           NYKY+N +N
Sbjct: 88  NYKYSNYNN 96


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 67  NYKYANGSN 41
           NYKY+N +N
Sbjct: 88  NYKYSNYNN 96


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 67  NYKYANGSN 41
           NYKY+N +N
Sbjct: 88  NYKYSNYNN 96


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 67  NYKYANGSN 41
           NYKY+N +N
Sbjct: 88  NYKYSNYNN 96


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 67  NYKYANGSN 41
           NYKY+N +N
Sbjct: 88  NYKYSNYNN 96


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 67  NYKYANGSN 41
           NYKY+N +N
Sbjct: 88  NYKYSNYNN 96


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 67  NYKYANGSN 41
           NYKY+N +N
Sbjct: 88  NYKYSNYNN 96


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 67  NYKYANGSN 41
           NYKY+N +N
Sbjct: 88  NYKYSNYNN 96


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 67  NYKYANGSN 41
           NYKY+N +N
Sbjct: 88  NYKYSNYNN 96


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 67  NYKYANGSN 41
           NYKY+N +N
Sbjct: 88  NYKYSNYNN 96


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 67  NYKYANGSN 41
           NYKY+N +N
Sbjct: 88  NYKYSNYNN 96


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 67  NYKYANGSN 41
           NYKY+N +N
Sbjct: 88  NYKYSNYNN 96


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 67  NYKYANGSN 41
           NYKY+N +N
Sbjct: 321 NYKYSNYNN 329


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 67  NYKYANGSN 41
           NYKY+N +N
Sbjct: 321 NYKYSNYNN 329


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 43   NRVFKYSLVP 14
            +R+F YS+VP
Sbjct: 1031 SRLFHYSVVP 1040


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,883
Number of Sequences: 438
Number of extensions: 309
Number of successful extensions: 23
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 13
effective length of database: 140,649
effective search space used:  2531682
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)