Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_C01
(371 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015480-1|AAH15480.1| 278|Homo sapiens membrane-associated rin... 57 2e-08
AL161652-2|CAI15361.1| 278|Homo sapiens membrane-associated rin... 57 2e-08
AL158040-6|CAI13639.1| 278|Homo sapiens membrane-associated rin... 57 2e-08
AK000452-1|BAA91173.1| 278|Homo sapiens protein ( Homo sapiens ... 57 2e-08
AB191202-1|BAF02285.1| 278|Homo sapiens membrane-associated RIN... 57 2e-08
X56494-1|CAA39849.1| 531|Homo sapiens pyruvate kinase protein. 29 6.3
M26252-1|AAA36672.1| 531|Homo sapiens protein ( Human TCB gene ... 29 6.3
M23725-1|AAA36449.1| 531|Homo sapiens M2-type pyruvate kinase p... 29 6.3
BC035198-1|AAH35198.1| 531|Homo sapiens pyruvate kinase, muscle... 29 6.3
BC012811-1|AAH12811.3| 531|Homo sapiens pyruvate kinase, muscle... 29 6.3
BC007952-1|AAH07952.3| 531|Homo sapiens pyruvate kinase, muscle... 29 6.3
BC007640-1|AAH07640.1| 531|Homo sapiens pyruvate kinase, muscle... 29 6.3
BC000481-1|AAH00481.3| 531|Homo sapiens pyruvate kinase, muscle... 29 6.3
AY352517-1|AAQ15274.1| 531|Homo sapiens pyruvate kinase, muscle... 29 6.3
AK222927-1|BAD96647.1| 531|Homo sapiens pyruvate kinase 3 isofo... 29 6.3
AF381578-1|AAK59337.1| 142|Homo sapiens immunoglobulin heavy ch... 28 8.4
>BC015480-1|AAH15480.1| 278|Homo sapiens membrane-associated ring
finger (C3HC4) 5 protein.
Length = 278
Score = 57.2 bits (132), Expect = 2e-08
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 284 SCLQRWVDEKQRGNITRKVLCPQCKAEYI 370
+CLQRWVDEKQRGN T +V CPQC AEY+
Sbjct: 45 ACLQRWVDEKQRGNSTARVACPQCNAEYL 73
Score = 50.0 bits (114), Expect = 2e-06
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 174 KNCWVCFATEADDRLAAWVQPCKC 245
++CWVCFAT+ DDR A WV+PC+C
Sbjct: 12 RSCWVCFATDEDDRTAEWVRPCRC 35
>AL161652-2|CAI15361.1| 278|Homo sapiens membrane-associated ring
finger (C3HC4) 5 protein.
Length = 278
Score = 57.2 bits (132), Expect = 2e-08
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 284 SCLQRWVDEKQRGNITRKVLCPQCKAEYI 370
+CLQRWVDEKQRGN T +V CPQC AEY+
Sbjct: 45 ACLQRWVDEKQRGNSTARVACPQCNAEYL 73
Score = 50.0 bits (114), Expect = 2e-06
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 174 KNCWVCFATEADDRLAAWVQPCKC 245
++CWVCFAT+ DDR A WV+PC+C
Sbjct: 12 RSCWVCFATDEDDRTAEWVRPCRC 35
>AL158040-6|CAI13639.1| 278|Homo sapiens membrane-associated ring
finger (C3HC4) 5 protein.
Length = 278
Score = 57.2 bits (132), Expect = 2e-08
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 284 SCLQRWVDEKQRGNITRKVLCPQCKAEYI 370
+CLQRWVDEKQRGN T +V CPQC AEY+
Sbjct: 45 ACLQRWVDEKQRGNSTARVACPQCNAEYL 73
Score = 50.0 bits (114), Expect = 2e-06
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 174 KNCWVCFATEADDRLAAWVQPCKC 245
++CWVCFAT+ DDR A WV+PC+C
Sbjct: 12 RSCWVCFATDEDDRTAEWVRPCRC 35
>AK000452-1|BAA91173.1| 278|Homo sapiens protein ( Homo sapiens
cDNA FLJ20445 fis, clone KAT05170. ).
Length = 278
Score = 57.2 bits (132), Expect = 2e-08
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 284 SCLQRWVDEKQRGNITRKVLCPQCKAEYI 370
+CLQRWVDEKQRGN T +V CPQC AEY+
Sbjct: 45 ACLQRWVDEKQRGNSTARVACPQCNAEYL 73
Score = 50.0 bits (114), Expect = 2e-06
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 174 KNCWVCFATEADDRLAAWVQPCKC 245
++CWVCFAT+ DDR A WV+PC+C
Sbjct: 12 RSCWVCFATDEDDRTAEWVRPCRC 35
>AB191202-1|BAF02285.1| 278|Homo sapiens membrane-associated
RING-CH protein V protein.
Length = 278
Score = 57.2 bits (132), Expect = 2e-08
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 284 SCLQRWVDEKQRGNITRKVLCPQCKAEYI 370
+CLQRWVDEKQRGN T +V CPQC AEY+
Sbjct: 45 ACLQRWVDEKQRGNSTARVACPQCNAEYL 73
Score = 50.0 bits (114), Expect = 2e-06
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 174 KNCWVCFATEADDRLAAWVQPCKC 245
++CWVCFAT+ DDR A WV+PC+C
Sbjct: 12 RSCWVCFATDEDDRTAEWVRPCRC 35
>X56494-1|CAA39849.1| 531|Homo sapiens pyruvate kinase protein.
Length = 531
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 300 HRCRQXLDGNPFWVRXSGCICKVAP 226
H CR +D P R +G IC + P
Sbjct: 29 HMCRLDIDSPPITARNTGIICTIGP 53
>M26252-1|AAA36672.1| 531|Homo sapiens protein ( Human TCB gene
encoding cytosolic thyroid hormone-binding protein,
complete cds. ).
Length = 531
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 300 HRCRQXLDGNPFWVRXSGCICKVAP 226
H CR +D P R +G IC + P
Sbjct: 29 HMCRLDIDSPPITARNTGIICTIGP 53
>M23725-1|AAA36449.1| 531|Homo sapiens M2-type pyruvate kinase
protein.
Length = 531
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 300 HRCRQXLDGNPFWVRXSGCICKVAP 226
H CR +D P R +G IC + P
Sbjct: 29 HMCRLDIDSPPITARNTGIICTIGP 53
>BC035198-1|AAH35198.1| 531|Homo sapiens pyruvate kinase, muscle
protein.
Length = 531
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 300 HRCRQXLDGNPFWVRXSGCICKVAP 226
H CR +D P R +G IC + P
Sbjct: 29 HMCRLDIDSPPITARNTGIICTIGP 53
>BC012811-1|AAH12811.3| 531|Homo sapiens pyruvate kinase, muscle
protein.
Length = 531
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 300 HRCRQXLDGNPFWVRXSGCICKVAP 226
H CR +D P R +G IC + P
Sbjct: 29 HMCRLDIDSPPITARNTGIICTIGP 53
>BC007952-1|AAH07952.3| 531|Homo sapiens pyruvate kinase, muscle
protein.
Length = 531
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 300 HRCRQXLDGNPFWVRXSGCICKVAP 226
H CR +D P R +G IC + P
Sbjct: 29 HMCRLDIDSPPITARNTGIICTIGP 53
>BC007640-1|AAH07640.1| 531|Homo sapiens pyruvate kinase, muscle
protein.
Length = 531
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 300 HRCRQXLDGNPFWVRXSGCICKVAP 226
H CR +D P R +G IC + P
Sbjct: 29 HMCRLDIDSPPITARNTGIICTIGP 53
>BC000481-1|AAH00481.3| 531|Homo sapiens pyruvate kinase, muscle
protein.
Length = 531
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 300 HRCRQXLDGNPFWVRXSGCICKVAP 226
H CR +D P R +G IC + P
Sbjct: 29 HMCRLDIDSPPITARNTGIICTIGP 53
>AY352517-1|AAQ15274.1| 531|Homo sapiens pyruvate kinase, muscle
protein.
Length = 531
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 300 HRCRQXLDGNPFWVRXSGCICKVAP 226
H CR +D P R +G IC + P
Sbjct: 29 HMCRLDIDSPPITARNTGIICTIGP 53
>AK222927-1|BAD96647.1| 531|Homo sapiens pyruvate kinase 3 isoform
1 variant protein.
Length = 531
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 300 HRCRQXLDGNPFWVRXSGCICKVAP 226
H CR +D P R +G IC + P
Sbjct: 29 HMCRLDIDSPPITARNTGIICTIGP 53
>AF381578-1|AAK59337.1| 142|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 142
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -1
Query: 356 CTV--DRVLSVLYFLSASRQPIAVDKXWMGTHFGLG 255
CTV D + S Y+LS RQP W+GT + G
Sbjct: 41 CTVSGDSISSTNYYLSCIRQPPGKGLEWIGTIYYSG 76
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,509,223
Number of Sequences: 237096
Number of extensions: 1026134
Number of successful extensions: 2241
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2241
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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