Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_C01
(371 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49968-3|CAA90260.1| 189|Caenorhabditis elegans Hypothetical pr... 34 0.028
Z74041-4|CAD56597.1| 394|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z74041-3|CAA98522.1| 368|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z46935-8|CAL36511.1| 365|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z46935-7|CAL36510.1| 373|Caenorhabditis elegans Hypothetical pr... 27 5.7
U41993-4|AAA83446.4| 574|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p... 26 9.9
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 26 9.9
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 26 9.9
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 26 9.9
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 26 9.9
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 26 9.9
>Z49968-3|CAA90260.1| 189|Caenorhabditis elegans Hypothetical
protein M110.3 protein.
Length = 189
Score = 34.3 bits (75), Expect = 0.028
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 159 EDENTKNCWVCFATEADDRLAAWVQPCKC 245
E E K C CF TE+D+ L ++V PC+C
Sbjct: 9 EQETEKYCKFCFGTESDNAL-SFVHPCRC 36
>Z74041-4|CAD56597.1| 394|Caenorhabditis elegans Hypothetical
protein T03F7.7b protein.
Length = 394
Score = 27.1 bits (57), Expect = 4.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 364 LRLALWTEYFPCYISSLLLVNP 299
L + +W EYF ++ LLL+NP
Sbjct: 184 LVVQVWAEYFSEHLCKLLLINP 205
>Z74041-3|CAA98522.1| 368|Caenorhabditis elegans Hypothetical
protein T03F7.7a protein.
Length = 368
Score = 27.1 bits (57), Expect = 4.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 364 LRLALWTEYFPCYISSLLLVNP 299
L + +W EYF ++ LLL+NP
Sbjct: 184 LVVQVWAEYFSEHLCKLLLINP 205
>Z46935-8|CAL36511.1| 365|Caenorhabditis elegans Hypothetical
protein M106.3b protein.
Length = 365
Score = 26.6 bits (56), Expect = 5.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 364 LRLALWTEYFPCYISSLLLVN 302
+RL WT+YF C S L+ VN
Sbjct: 117 IRLWTWTKYFVCDSSDLVKVN 137
>Z46935-7|CAL36510.1| 373|Caenorhabditis elegans Hypothetical
protein M106.3a protein.
Length = 373
Score = 26.6 bits (56), Expect = 5.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 364 LRLALWTEYFPCYISSLLLVN 302
+RL WT+YF C S L+ VN
Sbjct: 125 IRLWTWTKYFVCDSSDLVKVN 145
>U41993-4|AAA83446.4| 574|Caenorhabditis elegans Hypothetical
protein F44A2.3 protein.
Length = 574
Score = 26.2 bits (55), Expect = 7.5
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 61 IEC*XFRRNL**RVKSQIFRALVQIIQGL--YNPPRMKI 171
I+C FR + R+ Q+F I+QGL Y PR+ I
Sbjct: 22 IKCQSFRPAIRVRLNRQVFDQASSIVQGLVEYEVPRVNI 60
>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
protein Y41E3.9 protein.
Length = 1440
Score = 25.8 bits (54), Expect = 9.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 237 KVAPMQLTCRQLLSQSTPNNFSYFH 163
K PM L R+ + +TPN+ ++H
Sbjct: 976 KTPPMLLAARRAAAPTTPNSSKFYH 1000
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 105 KSDIQGASTDNSRALQPTEDENTKNCWVCFATEADD 212
++ Q +STD++R L+ DE+T + F T D+
Sbjct: 631 QASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDE 666
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 105 KSDIQGASTDNSRALQPTEDENTKNCWVCFATEADD 212
++ Q +STD++R L+ DE+T + F T D+
Sbjct: 704 QASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDE 739
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 105 KSDIQGASTDNSRALQPTEDENTKNCWVCFATEADD 212
++ Q +STD++R L+ DE+T + F T D+
Sbjct: 704 QASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDE 739
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin
receptor protein 2 protein.
Length = 1338
Score = 25.8 bits (54), Expect = 9.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 243 ICKVAPMQLTCRQLLSQSTPNNF 175
+CKVAP Q+ + + S PN +
Sbjct: 191 VCKVAPTQIQAKYVAQCSCPNGY 213
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 25.8 bits (54), Expect = 9.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 243 ICKVAPMQLTCRQLLSQSTPNNF 175
+CKVAP Q+ + + S PN +
Sbjct: 191 VCKVAPTQIQAKYVAQCSCPNGY 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,771,575
Number of Sequences: 27780
Number of extensions: 167738
Number of successful extensions: 357
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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