Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_B17
         (391 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   3.9  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    22   6.9  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    22   6.9  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    22   9.1  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 198 YIKFICKPSLAAFRLEYSINLS 133
           + KF CK  + +F + + INL+
Sbjct: 48  FSKFACKIQIQSFSMAFPINLA 69


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
          isoform 2 protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 26 MDYVSNQAQNYRTNNVIITM 85
          +DY+SN  +N R   V+ T+
Sbjct: 24 VDYISNYLENIRDRRVLPTV 43


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 26  MDYVSNQAQNYRTNNVIITM 85
           +DY+SN  +N R   V+ T+
Sbjct: 55  VDYISNYLENIRDRRVLPTV 74


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 43  SSSKLQDKQCNNNNGRGFH 99
           SSS      CNN++  G H
Sbjct: 45  SSSSRNSSSCNNSSSSGTH 63


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,802
Number of Sequences: 2352
Number of extensions: 7730
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)