Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_B17
(391 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 140 4e-34
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 69 9e-13
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 69 9e-13
U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical pr... 48 3e-06
Z81534-2|CAB04344.2| 226|Caenorhabditis elegans Hypothetical pr... 32 0.12
Z81105-4|CAB03219.1| 299|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical pr... 27 4.7
AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger p... 27 4.7
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr... 27 6.2
AC024835-3|AAK68538.2| 405|Caenorhabditis elegans Hypothetical ... 27 6.2
Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical p... 26 8.2
Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical p... 26 8.2
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical
protein F55D10.1 protein.
Length = 955
Score = 140 bits (338), Expect = 4e-34
Identities = 67/129 (51%), Positives = 85/129 (65%)
Frame = +2
Query: 5 EEKIALFMDYVSNQAQNYRTNNVIITMGGDFTYQDAVMWYKNLDKLIEYSNLKAAKDGLQ 184
+EK+ F+D+V NQA + TN V++ MG DF Y +A WY NLDKLI+Y N +K +
Sbjct: 262 KEKVDAFVDHVKNQAAHQSTNQVMLLMGSDFQYTNANSWYVNLDKLIKYVNADTSK---K 318
Query: 185 MNFMYSTPTCYLKAVRDADPVLPTKQDDFFPYASDPTAYWTGYFTSRPTTKYFEREANNY 364
+ +YSTP CY KAV+ P L K DDFFPYAS +YWTGYFTSRP K R+A+
Sbjct: 319 VRVIYSTPACYTKAVQAKTPTLSVKHDDFFPYASGRHSYWTGYFTSRPAFKGMIRQASCM 378
Query: 365 LQVVKQLQV 391
LQ+ KQL V
Sbjct: 379 LQLAKQLDV 387
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
protein F58H1.1b protein.
Length = 1145
Score = 69.3 bits (162), Expect = 9e-13
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Frame = +2
Query: 20 LFMDYVSNQAQNYRTNNVIITMGGDFTYQDAVMW---YKNLDKLIEYSNLKAAKDGLQMN 190
+ D ++Q ++ N + +G DF Y W Y+N KL EY N +K ++
Sbjct: 419 MIYDQYRKKSQLFKNNVIFQPLGDDFRYDIDFEWNSQYENYKKLFEYMN---SKSEWNVH 475
Query: 191 FMYSTPTCYLK----AVRDADPVLPTKQDDFFPYASDPTAYWTGYFTSRPTTKYFEREAN 358
+ T + Y K A+ + LPT DFF YA YW+GYFTSRP K +R
Sbjct: 476 AQFGTLSDYFKKLDTAISASGEQLPTFSGDFFTYADRDDHYWSGYFTSRPFYKQLDRVLQ 535
Query: 359 NYLQ 370
+YL+
Sbjct: 536 HYLR 539
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
protein F58H1.1a protein.
Length = 1143
Score = 69.3 bits (162), Expect = 9e-13
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Frame = +2
Query: 20 LFMDYVSNQAQNYRTNNVIITMGGDFTYQDAVMW---YKNLDKLIEYSNLKAAKDGLQMN 190
+ D ++Q ++ N + +G DF Y W Y+N KL EY N +K ++
Sbjct: 417 MIYDQYRKKSQLFKNNVIFQPLGDDFRYDIDFEWNSQYENYKKLFEYMN---SKSEWNVH 473
Query: 191 FMYSTPTCYLK----AVRDADPVLPTKQDDFFPYASDPTAYWTGYFTSRPTTKYFEREAN 358
+ T + Y K A+ + LPT DFF YA YW+GYFTSRP K +R
Sbjct: 474 AQFGTLSDYFKKLDTAISASGEQLPTFSGDFFTYADRDDHYWSGYFTSRPFYKQLDRVLQ 533
Query: 359 NYLQ 370
+YL+
Sbjct: 534 HYLR 537
>U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical
protein F48C1.1 protein.
Length = 1064
Score = 47.6 bits (108), Expect = 3e-06
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Frame = +2
Query: 11 KIALFMDYVSNQAQNYRTNNVIITMGGDFTYQDAVMWYKNLDKLIEYSNLKAAKDGLQMN 190
K ++ + ++ Y+ +++ G DF + W + D I + G ++
Sbjct: 366 KAEKLVNQLEKMSEMYKAPVILMMHGDDFRFDMIEEWNQQHDNFIPVFD--EINKGSRVE 423
Query: 191 FMYSTPTCYLKAV-------RDADPVLPTKQDDFFPYASDPTAYWTGYFTSRPTTKYFER 349
+ T T Y + +D++P PT DFFPY YWTGY+T+RP +F+R
Sbjct: 424 IRFGTFTDYFNDLEKWYSNNKDSEP--PTVSGDFFPYMCALGDYWTGYYTTRP---FFKR 478
Query: 350 E 352
+
Sbjct: 479 Q 479
>Z81534-2|CAB04344.2| 226|Caenorhabditis elegans Hypothetical
protein F37H8.3 protein.
Length = 226
Score = 32.3 bits (70), Expect = 0.12
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 20 LFMDYVSNQAQNYRTNNVIITMGGDFTYQDAVMWYKNLDKLIEYSNLKAAKDGLQMNFMY 199
LF+ Y+ ++ N T+NV+I + + V +KN+ K +E + K K + N M+
Sbjct: 75 LFLQYLKHKYGNKLTDNVVIKPFTECLRGENVKIHKNMQKTVEILHKKGFKTAMLTNNMF 134
>Z81105-4|CAB03219.1| 299|Caenorhabditis elegans Hypothetical
protein R05D7.4 protein.
Length = 299
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 8 EKIALFMDYVSNQAQNYRTNNVIITMGGDFTYQDAV--MWYKNLDKLI 145
E + LF+D V + + R N + +MGG + A+ W ++KLI
Sbjct: 100 EDLVLFIDKVKEETKKTRVNLLGHSMGGKIVMRLAIDSKWSDRIEKLI 147
>Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical
protein T07C5.1c protein.
Length = 523
Score = 27.5 bits (58), Expect = 3.6
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 218 LKAVRDADPVLPTKQDDFFPYASDPTAYWTGYFTSRPTTKYFEREANNYLQVVKQL 385
L+A +D + LP KQDD+F + + + T P ER + L +++L
Sbjct: 276 LEAGKDENVTLPKKQDDYFKKGKSGSVF-VSFGTVTPFRSLPERIQLSILNAIQKL 330
>Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical
protein F58E6.1b protein.
Length = 764
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 220 ESCEGRRSRPSYKTGRFLPVRE--RPDCVLDRIFHV 321
++CE +S + +F P+++ +P C L+ IFHV
Sbjct: 90 KTCEICKSEYTNSGAQFKPIKQWSKPKCSLNNIFHV 125
>Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical
protein F58E6.1a protein.
Length = 966
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 220 ESCEGRRSRPSYKTGRFLPVRE--RPDCVLDRIFHV 321
++CE +S + +F P+++ +P C L+ IFHV
Sbjct: 90 KTCEICKSEYTNSGAQFKPIKQWSKPKCSLNNIFHV 125
>AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger
protein STAT-B protein.
Length = 810
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 220 ESCEGRRSRPSYKTGRFLPVRE--RPDCVLDRIFHV 321
++CE +S + +F P+++ +P C L+ IFHV
Sbjct: 136 KTCEICKSEYTNSGAQFKPIKQWSKPKCSLNNIFHV 171
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 4 RGKDCVVYGLRE*SSSKLQD 63
RGKDC+V G+ + S LQD
Sbjct: 37 RGKDCIVIGVEKKSIPALQD 56
>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical
protein W07E11.1 protein.
Length = 2207
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 324 LDVKYPVQYAVGSLAYGKKSSCFVGRTGS 238
+D+ YPV+Y V L G + C V T +
Sbjct: 649 IDITYPVKYGVKGLVPGLDAMCCVACTAA 677
>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical
protein W07E11.1 protein.
Length = 2207
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 324 LDVKYPVQYAVGSLAYGKKSSCFVGRTGS 238
+D+ YPV+Y V L G + C V T +
Sbjct: 649 IDITYPVKYGVKGLVPGLDAMCCVACTAA 677
>AC024835-3|AAK68538.2| 405|Caenorhabditis elegans Hypothetical
protein Y57E12B.4 protein.
Length = 405
Score = 26.6 bits (56), Expect = 6.2
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +2
Query: 191 FMYSTPTCYLKAVRDADPVLPTKQDDFFPYASDPTAYWTGYFTSRPTT 334
F S PT +A DPV P K +F + + Y T PTT
Sbjct: 308 FERSEPTMGTEAT--TDPVFPDKTTNFATVSEHSRSSTPNYITEHPTT 353
>Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical
protein K08E3.3b protein.
Length = 610
Score = 26.2 bits (55), Expect = 8.2
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 23 FMDYVSNQAQNYRTNNVIITMGGDFTYQDAVMWYKNLDKLIEYSNLKAAKDGL--QMNFM 196
F+ + A ++T+ I GG +Y + + ++LK D L Q+N M
Sbjct: 79 FLQQLDQIATRHQTSAEHIR-GGVVSYVASKTCQMRSSRKNAINDLKTINDKLEDQINEM 137
Query: 197 YSTPTCYLKAVRDAD 241
+ CYLK+ +DA+
Sbjct: 138 CKSGKCYLKSFKDAE 152
>Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical
protein K08E3.3a protein.
Length = 608
Score = 26.2 bits (55), Expect = 8.2
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 23 FMDYVSNQAQNYRTNNVIITMGGDFTYQDAVMWYKNLDKLIEYSNLKAAKDGL--QMNFM 196
F+ + A ++T+ I GG +Y + + ++LK D L Q+N M
Sbjct: 79 FLQQLDQIATRHQTSAEHIR-GGVVSYVASKTCQMRSSRKNAINDLKTINDKLEDQINEM 137
Query: 197 YSTPTCYLKAVRDAD 241
+ CYLK+ +DA+
Sbjct: 138 CKSGKCYLKSFKDAE 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,882,524
Number of Sequences: 27780
Number of extensions: 177933
Number of successful extensions: 520
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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