Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_B16
         (378 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK056290-1|BAB71140.1|  235|Homo sapiens protein ( Homo sapiens ...    31   0.94 
BC042554-1|AAH42554.1|  678|Homo sapiens KIAA0323 protein.             30   2.9  
BC015780-1|AAH15780.1|  419|Homo sapiens KIAA0323 protein protein.     30   2.9  
AB002321-1|BAA20781.1|  724|Homo sapiens KIAA0323 protein.             30   2.9  
BC069229-1|AAH69229.1|  476|Homo sapiens TIGD5 protein protein.        29   6.6  
AK223583-1|BAD97303.1|  593|Homo sapiens tigger transposable ele...    29   6.6  
BC021297-1|AAH21297.1|  832|Homo sapiens DYNC1H1 protein protein.      28   8.8  
AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, he...    28   8.8  
AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein.     28   8.8  

>AK056290-1|BAB71140.1|  235|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31728 fis, clone NT2RI2006788. ).
          Length = 235

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -2

Query: 125 SPARHLLLQYSVPLPLDVERVPLEQEPQLRGVGPLPQRVPR 3
           SPA HL +Q +   P    R P    P L  V   PQR+P+
Sbjct: 88  SPAHHLCMQLTATAPSSAPRTPTPVPPALSPVA-CPQRLPK 127


>BC042554-1|AAH42554.1|  678|Homo sapiens KIAA0323 protein.
          Length = 678

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 81  RKRNAILQEQVSSRGDVSPPRCLAPDSVPAPLWH 182
           + R A L +++ + G+ SPPR  +P   P P WH
Sbjct: 337 QSRGASLLQRLHN-GNASPPRVPSPPPAPEPPWH 369


>BC015780-1|AAH15780.1|  419|Homo sapiens KIAA0323 protein protein.
          Length = 419

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 81  RKRNAILQEQVSSRGDVSPPRCLAPDSVPAPLWH 182
           + R A L +++ + G+ SPPR  +P   P P WH
Sbjct: 78  QSRGASLLQRLHN-GNASPPRVPSPPPAPEPPWH 110


>AB002321-1|BAA20781.1|  724|Homo sapiens KIAA0323 protein.
          Length = 724

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 81  RKRNAILQEQVSSRGDVSPPRCLAPDSVPAPLWH 182
           + R A L +++ + G+ SPPR  +P   P P WH
Sbjct: 383 QSRGASLLQRLHN-GNASPPRVPSPPPAPEPPWH 415


>BC069229-1|AAH69229.1|  476|Homo sapiens TIGD5 protein protein.
          Length = 476

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -2

Query: 89  PLPLDVERVPLEQEPQL-RGVGPLPQRVP 6
           P P      P+++EP L  G GPLP R P
Sbjct: 27  PAPSPAPGPPVKEEPALPSGAGPLPDRAP 55


>AK223583-1|BAD97303.1|  593|Homo sapiens tigger transposable
           element derived 5 variant protein.
          Length = 593

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -2

Query: 89  PLPLDVERVPLEQEPQL-RGVGPLPQRVP 6
           P P      P+++EP L  G GPLP R P
Sbjct: 144 PAPSPAPGPPVKEEPALPSGAGPLPDRAP 172


>BC021297-1|AAH21297.1|  832|Homo sapiens DYNC1H1 protein protein.
          Length = 832

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 113 HLLLQYSVPLPLDVERVPLEQEPQLRGVGPLPQRV 9
           H L QYS+   LD+    L + P L+GV    QR+
Sbjct: 8   HFLYQYSLQFFLDIYHNVLYENPNLKGVTDHTQRL 42


>AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, heavy
            polypeptide 1 protein.
          Length = 4646

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 113  HLLLQYSVPLPLDVERVPLEQEPQLRGVGPLPQRV 9
            H L QYS+   LD+    L + P L+GV    QR+
Sbjct: 3822 HFLYQYSLQFFLDIYHNVLYENPNLKGVTDHTQRL 3856


>AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein.
          Length = 4658

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 113  HLLLQYSVPLPLDVERVPLEQEPQLRGVGPLPQRV 9
            H L QYS+   LD+    L + P L+GV    QR+
Sbjct: 3834 HFLYQYSLQFFLDIYHNVLYENPNLKGVTDHTQRL 3868


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,911,767
Number of Sequences: 237096
Number of extensions: 359471
Number of successful extensions: 1942
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1942
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)