Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_B13
(365 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical pr... 31 0.33
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 30 0.44
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 30 0.44
AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical ... 30 0.44
AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical ... 30 0.44
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 29 1.0
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 29 1.0
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 29 1.3
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 28 2.4
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 27 3.1
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 27 3.1
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 27 5.4
Z79600-5|CAB01878.2| 412|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical pr... 27 5.4
AF520567-1|AAM75345.1| 412|Caenorhabditis elegans intraflagella... 27 5.4
U00063-3|AAK18959.2| 446|Caenorhabditis elegans Hypothetical pr... 26 7.2
EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein. 26 7.2
AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical... 26 7.2
U53180-2|AAK68284.1| 477|Caenorhabditis elegans Hypothetical pr... 26 9.5
AL132949-3|CAB61070.1| 179|Caenorhabditis elegans Hypothetical ... 26 9.5
AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical ... 26 9.5
AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical ... 26 9.5
AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical ... 26 9.5
>Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical
protein K01C8.9 protein.
Length = 556
Score = 30.7 bits (66), Expect = 0.33
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 2 HEADSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPEL 127
H +D E +++ + V +K+ VT R+++ K+DD+P L
Sbjct: 463 HNSDEEEDDDDEMETDVNEKKQTVTSGRKVKGPTKDDDKPVL 504
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 30.3 bits (65), Expect = 0.44
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 2 HEADSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVSHVDPSNQSIDAD 175
+ A + + +EK E V+ T++RE DD P +++ SH DP+ S+ ++
Sbjct: 4852 YSASGSPVPSEKSVERVIETTTTNTVTRE--HFEHEDDIPTIVETSHDDPAASSVPSE 4907
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 30.3 bits (65), Expect = 0.44
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 2 HEADSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVSHVDPSNQSIDAD 175
+ A + + +EK E V+ T++RE DD P +++ SH DP+ S+ ++
Sbjct: 4852 YSASGSPVPSEKSVERVIETTTTNTVTRE--HFEHEDDIPTIVETSHDDPAASSVPSE 4907
>AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 30.3 bits (65), Expect = 0.44
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 253 KRRFETASIKSRDSDKENEDIAQEEEK 333
+++FE A +K RD+D +ED + EEK
Sbjct: 403 RKKFENAILKGRDADASSEDQKKGEEK 429
>AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 30.3 bits (65), Expect = 0.44
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 253 KRRFETASIKSRDSDKENEDIAQEEEK 333
+++FE A +K RD+D +ED + EEK
Sbjct: 403 RKKFENAILKGRDADASSEDQKKGEEK 429
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 29.1 bits (62), Expect = 1.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 274 SIKSRDSDKENEDIAQEEEKRLVD 345
+I D D+ENE++++EE L+D
Sbjct: 1988 TIDESDDDEENEEVSKEENNELID 2011
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 29.1 bits (62), Expect = 1.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 274 SIKSRDSDKENEDIAQEEEKRLVD 345
+I D D+ENE++++EE L+D
Sbjct: 1988 TIDESDDDEENEEVSKEENNELID 2011
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 29.1 bits (62), Expect = 1.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 274 SIKSRDSDKENEDIAQEEEKRLVD 345
+I D D+ENE++++EE L+D
Sbjct: 1988 TIDESDDDEENEEVSKEENNELID 2011
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 26 KNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVSHV 145
K E H + RKK + ++EL + ND E E +++H+
Sbjct: 251 KLEAHKKQADNRKKQIAKNQELANSYLNDKEAEAARLAHL 290
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 232 KK*TTPKKRRFETASIKSRDSDKENEDIAQEEEKR 336
KK TP+K ++A+++ +SD E ED+ + +KR
Sbjct: 518 KKGKTPRKSSKKSAAVE--ESDNEEEDVEESPKKR 550
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 5 EADSNE-IKNEKHDETVVYRKKPVTLSRELRSERKND 112
EA+ E +K E DET + P LS E+ S+ ND
Sbjct: 1756 EAEEEEGVKQEPDDETQDSAEAPPVLSAEVNSDDSND 1792
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 5 EADSNE-IKNEKHDETVVYRKKPVTLSRELRSERKND 112
EA+ E +K E DET + P LS E+ S+ ND
Sbjct: 1756 EAEEEEGVKQEPDDETQDSAEAPPVLSAEVNSDDSND 1792
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 26.6 bits (56), Expect = 5.4
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 11 DSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMK 133
++ ++K K DE + R + REL ++ K D+E + +
Sbjct: 107 ENEQVKRPKSDEPLSERDVIINKIRELEAKAKKDEEERIAR 147
>Z79600-5|CAB01878.2| 412|Caenorhabditis elegans Hypothetical
protein F59C6.7 protein.
Length = 412
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 226 WNKK*TTPKKRRFETASIKSRDSDKENEDIAQEEEKRLVD 345
W K P K E ++ +D D +N+DI +E L D
Sbjct: 157 WQKM--IPPKEEDEDTAVDEQDEDDDNDDIVEEPMNFLDD 194
>Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical
protein F07A11.6d protein.
Length = 567
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 26 KNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVSHVDPSNQSIDADSI 181
KNE + ++ R+ + L EL +E + D +P+L ++ + ADS+
Sbjct: 240 KNEMFRKEIL-RRLDIILLEELGAEDEEDQKPDLKQIPTSEEDTDDSKADSM 290
>AF520567-1|AAM75345.1| 412|Caenorhabditis elegans intraflagellar
transport proteinCHE-13 protein.
Length = 412
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 226 WNKK*TTPKKRRFETASIKSRDSDKENEDIAQEEEKRLVD 345
W K P K E ++ +D D +N+DI +E L D
Sbjct: 157 WQKM--IPPKEEDEDTAVDEQDEDDDNDDIVEEPMNFLDD 194
>U00063-3|AAK18959.2| 446|Caenorhabditis elegans Hypothetical
protein F56C9.3 protein.
Length = 446
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 268 TASIKSRDSDKENEDIAQEEEKRLVDIAARVS 363
T SI S+DS + AQ EE +L AAR++
Sbjct: 106 TVSIHSKDSLMVRHEEAQNEEIKLTKAAARLA 137
>EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein.
Length = 801
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +1
Query: 250 KKRRFETASIKS-RDSDKENEDIAQEEE 330
KK+R E S+++ +SD ++E+I EEE
Sbjct: 572 KKKRVEQKSVENDAESDADDEEIEDEEE 599
>AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical
protein Y39B6A.14 protein.
Length = 801
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +1
Query: 250 KKRRFETASIKS-RDSDKENEDIAQEEE 330
KK+R E S+++ +SD ++E+I EEE
Sbjct: 572 KKKRVEQKSVENDAESDADDEEIEDEEE 599
>U53180-2|AAK68284.1| 477|Caenorhabditis elegans Hypothetical
protein D1014.6 protein.
Length = 477
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 313 YLRFLYHCH-VILSKPSRTSVFLE*FTFCSTIIGCRHV 203
Y R+ Y CH + P +TSVF E FC+ G +++
Sbjct: 149 YCRY-YDCHRKEIPDPFKTSVFPESTVFCARRPGAKYI 185
>AL132949-3|CAB61070.1| 179|Caenorhabditis elegans Hypothetical
protein Y53F4B.3 protein.
Length = 179
Score = 25.8 bits (54), Expect = 9.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 29 NEKHDETVVYRKKPVTLSRELRSERKNDDE-PELMKVSHVDPSNQSIDADSIAQ 187
N DETVV + + E+ E + D+E PE V +D N+ I D A+
Sbjct: 127 NSGQDETVVEEETIIEEEEEIHVEEEEDEELPE--TVLEID-ENEEIARDKFAE 177
>AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical
protein W07E6.1 protein.
Length = 664
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 244 TPKKRRFETASIKSRDSDKENEDIAQEEEKRLVD 345
TPKK++ KS E E I Q E+ +L+D
Sbjct: 37 TPKKKKLVKKVKKSAKKAHEEEPIEQVEKLQLID 70
>AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical
protein C18H7.10 protein.
Length = 342
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 11 DSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVSHVD 148
D N+ KN+K++E +K + E +DDEPE + + +D
Sbjct: 225 DKND-KNKKNNEDAK-KKDNTQKDADEEEEDNSDDEPETLDANKID 268
>AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical
protein Y53G8AL.1 protein.
Length = 704
Score = 25.8 bits (54), Expect = 9.5
Identities = 21/86 (24%), Positives = 33/86 (38%)
Frame = +2
Query: 8 ADSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVSHVDPSNQSIDADSIAQ 187
A N E H V + S E + +ND+ PE+ K+ P + +++ IA
Sbjct: 537 AAENAENAENHVTAVAESENSENFSSESENPAENDENPEISKIMTSSPPG-TPESEPIAD 595
Query: 188 IY*I*DVSTSDNSGTKSKLLQKNGGS 265
D + D T + KN S
Sbjct: 596 -----DSESEDEKSTIRYIPSKNSES 616
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,727,717
Number of Sequences: 27780
Number of extensions: 121195
Number of successful extensions: 665
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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