Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_B12
         (342 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     22   7.2  
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    22   7.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            21   9.6  

>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 301 PCRPWWSCYG 330
           P RPWWS  G
Sbjct: 79  PGRPWWSVPG 88


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 295 ICDTDGYHEIIQY 257
           + D+DG+H I+ Y
Sbjct: 124 LLDSDGHHRIVDY 136


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 235 YLLDKQKYTELFHD 276
           Y L  + YTE+FH+
Sbjct: 45  YQLSNKDYTEVFHE 58


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 304,146
Number of Sequences: 2352
Number of extensions: 4271
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)