Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_B09
         (541 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z957 Cluster: ORF170; n=1; Staphylococcus phage Twort...    34   2.4  
UniRef50_A7IYF6 Cluster: Gp89; n=1; Corynebacterium phage P1201|...    33   3.2  

>UniRef50_Q4Z957 Cluster: ORF170; n=1; Staphylococcus phage
           Twort|Rep: ORF170 - Staphylococcus phage Twort
          Length = 90

 Score = 33.9 bits (74), Expect = 2.4
 Identities = 23/67 (34%), Positives = 35/67 (52%)
 Frame = -1

Query: 334 FSYELYLAYL*WFIRYNLLNLFIFQSVLFVVYRNNVKILHLMYLDSSISIVTYY*LYHIF 155
           + Y LY  Y  + I  N+L+L I+ ++L V+Y N + I   + L    S   YY LY I 
Sbjct: 3   YRYLLYFTYFNYCIMLNILHL-IYSNIL-VIYLNVLVIYTNLVLSMLYSTFIYYYLY-IL 59

Query: 154 MFTFLIY 134
           ++ F  Y
Sbjct: 60  LYGFRFY 66


>UniRef50_A7IYF6 Cluster: Gp89; n=1; Corynebacterium phage
           P1201|Rep: Gp89 - Corynebacterium phage P1201
          Length = 86

 Score = 33.5 bits (73), Expect = 3.2
 Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
 Frame = -1

Query: 322 LYLAYL*WFIRYNLLNLFIFQSVLFVVYRNNVKILHLMYLDSSISIVTY-Y*LYHIFMFT 146
           +Y++ L  ++   + NLFIF  +LF+ Y     I +L+++   +  + Y Y +Y +F+F 
Sbjct: 5   MYISMLYIYVLLFICNLFIFYYLLFIFY-----IYYLLFIIYYLLYIIYLYYIYLLFIFI 59

Query: 145 FLIY 134
           + +Y
Sbjct: 60  YYLY 63


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,192,982
Number of Sequences: 1657284
Number of extensions: 8021909
Number of successful extensions: 14114
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14107
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)