Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_B05
         (335 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC025688-1|AAH25688.1|  377|Homo sapiens mucin 7, secreted protein.    29   4.7  
BC146788-1|AAI46789.1| 1761|Homo sapiens jumonji domain containi...    28   6.2  
BC117693-1|AAI17694.1| 1551|Homo sapiens JMJD1B protein protein.       28   6.2  
BC000539-1|AAH00539.2| 1578|Homo sapiens JMJD1B protein protein.       28   6.2  
AF338242-1|AAK13499.1| 1761|Homo sapiens nuclear protein 5qNCA p...    28   6.2  
AF251039-1|AAF63765.1| 1417|Homo sapiens putative zinc finger pr...    28   6.2  
AB029005-1|BAA83034.2| 1787|Homo sapiens KIAA1082 protein protein.     28   6.2  

>BC025688-1|AAH25688.1|  377|Homo sapiens mucin 7, secreted protein.
          Length = 377

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 92  RSHLRLAHRPGLLGAASPFFF*RGECIYPR 3
           +SH  L H PGLL    PF     +C++ R
Sbjct: 40  KSHFELPHYPGLLAHQKPFIRKSYKCLHKR 69


>BC146788-1|AAI46789.1| 1761|Homo sapiens jumonji domain containing
           1B protein.
          Length = 1761

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +1

Query: 214 EIHQNVDLSNPLIRQCPNLSLPTYSQYITTFS 309
           E  ++ DLS  L  QC + +LPT S Y TT S
Sbjct: 514 EAQKDTDLSKNLFFQCMSQTLPT-SNYFTTVS 544


>BC117693-1|AAI17694.1| 1551|Homo sapiens JMJD1B protein protein.
          Length = 1551

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +1

Query: 214 EIHQNVDLSNPLIRQCPNLSLPTYSQYITTFS 309
           E  ++ DLS  L  QC + +LPT S Y TT S
Sbjct: 304 EAQKDTDLSKNLFFQCMSQTLPT-SNYFTTVS 334


>BC000539-1|AAH00539.2| 1578|Homo sapiens JMJD1B protein protein.
          Length = 1578

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +1

Query: 214 EIHQNVDLSNPLIRQCPNLSLPTYSQYITTFS 309
           E  ++ DLS  L  QC + +LPT S Y TT S
Sbjct: 331 EAQKDTDLSKNLFFQCMSQTLPT-SNYFTTVS 361


>AF338242-1|AAK13499.1| 1761|Homo sapiens nuclear protein 5qNCA
           protein.
          Length = 1761

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +1

Query: 214 EIHQNVDLSNPLIRQCPNLSLPTYSQYITTFS 309
           E  ++ DLS  L  QC + +LPT S Y TT S
Sbjct: 514 EAQKDTDLSKNLFFQCMSQTLPT-SNYFTTVS 544


>AF251039-1|AAF63765.1| 1417|Homo sapiens putative zinc finger
           protein protein.
          Length = 1417

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +1

Query: 214 EIHQNVDLSNPLIRQCPNLSLPTYSQYITTFS 309
           E  ++ DLS  L  QC + +LPT S Y TT S
Sbjct: 170 EAQKDTDLSKNLFFQCMSQTLPT-SNYFTTVS 200


>AB029005-1|BAA83034.2| 1787|Homo sapiens KIAA1082 protein protein.
          Length = 1787

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +1

Query: 214 EIHQNVDLSNPLIRQCPNLSLPTYSQYITTFS 309
           E  ++ DLS  L  QC + +LPT S Y TT S
Sbjct: 540 EAQKDTDLSKNLFFQCMSQTLPT-SNYFTTVS 570


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,142,525
Number of Sequences: 237096
Number of extensions: 735155
Number of successful extensions: 1336
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)