Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_B02
(501 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase p... 60 3e-09
S70284-1|AAB30631.1| 237|Homo sapiens stearoyl-CoA desaturase p... 60 3e-09
BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase... 60 3e-09
BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein. 60 3e-09
AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase... 60 3e-09
AL139819-3|CAH72823.1| 242|Homo sapiens stearoyl-CoA desaturase... 60 3e-09
AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase... 60 3e-09
AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase... 60 3e-09
AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase... 60 3e-09
AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase... 60 3e-09
AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase pro... 48 2e-05
AC073413-1|AAY40977.1| 256|Homo sapiens unknown protein. 47 4e-05
BC048971-1|AAH48971.1| 134|Homo sapiens SCD5 protein protein. 46 1e-04
AL831891-1|CAD38567.1| 160|Homo sapiens hypothetical protein pr... 46 1e-04
AK024685-1|BAB14961.1| 256|Homo sapiens protein ( Homo sapiens ... 41 0.002
AB049388-1|BAB56112.1| 437|Homo sapiens conserved ERA-like GTPa... 30 5.2
BC019094-1|AAH19094.1| 437|Homo sapiens Era G-protein-like 1 (E... 29 6.9
AY007435-1|AAG12978.1| 444|Homo sapiens ERA-W protein. 29 6.9
AF082658-1|AAC31604.1| 282|Homo sapiens Era GTPase B protein pr... 29 6.9
AF082657-1|AAC31603.1| 443|Homo sapiens Era GTPase A protein pr... 29 6.9
>Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase
protein.
Length = 359
Score = 60.5 bits (140), Expect = 3e-09
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSPHQEKLKESIDMSDLESDS 197
+Y+W + HR HH T DP+N ++GF H+ + + P ++ ++D+SDLE++
Sbjct: 150 VYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEK 209
Query: 198 VVKFFKKFY-IGLYTPCY 248
+V F +++Y GL C+
Sbjct: 210 LVMFQRRYYKPGLLMMCF 227
Score = 56.4 bits (130), Expect = 5e-08
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKPGEK--SPTDSNSVSLLTTTLWP 457
W ++ +VFV FLRY +VL+A+WL+ SA L+G +P +K SP ++ VSL
Sbjct: 238 WGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGF 297
Query: 458 H-YQYLIPYEYKSGE 499
H Y + PY+Y + E
Sbjct: 298 HNYHHSFPYDYSASE 312
>S70284-1|AAB30631.1| 237|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 237
Score = 60.5 bits (140), Expect = 3e-09
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSPHQEKLKESIDMSDLESDS 197
+Y+W + HR HH T DP+N ++GF H+ + + P ++ ++D+SDLE++
Sbjct: 148 VYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEK 207
Query: 198 VVKFFKKFY-IGLYTPCY 248
+V F +++Y GL C+
Sbjct: 208 LVMFQRRYYKPGLLMMCF 225
>BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 60.5 bits (140), Expect = 3e-09
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSPHQEKLKESIDMSDLESDS 197
+Y+W + HR HH T DP+N ++GF H+ + + P ++ ++D+SDLE++
Sbjct: 150 VYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEK 209
Query: 198 VVKFFKKFY-IGLYTPCY 248
+V F +++Y GL C+
Sbjct: 210 LVMFQRRYYKPGLLLMCF 227
Score = 56.4 bits (130), Expect = 5e-08
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKPGEK--SPTDSNSVSLLTTTLWP 457
W ++ +VFV FLRY +VL+A+WL+ SA L+G +P +K SP ++ VSL
Sbjct: 238 WGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGF 297
Query: 458 H-YQYLIPYEYKSGE 499
H Y + PY+Y + E
Sbjct: 298 HNYHHSFPYDYSASE 312
>BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein.
Length = 355
Score = 60.5 bits (140), Expect = 3e-09
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSPHQEKLKESIDMSDLESDS 197
+Y+W + HR HH T DP+N ++GF H+ + + P ++ ++D+SDLE++
Sbjct: 150 VYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEK 209
Query: 198 VVKFFKKFY-IGLYTPCY 248
+V F +++Y GL C+
Sbjct: 210 LVMFQRRYYKPGLLMMCF 227
Score = 56.4 bits (130), Expect = 5e-08
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKPGEK--SPTDSNSVSLLTTTLWP 457
W ++ +VFV FLRY +VL+A+WL+ SA L+G +P +K SP ++ VSL
Sbjct: 238 WGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGF 297
Query: 458 H-YQYLIPYEYKSGE 499
H Y + PY+Y + E
Sbjct: 298 HNYHHSFPYDYSASE 312
>AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 60.5 bits (140), Expect = 3e-09
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSPHQEKLKESIDMSDLESDS 197
+Y+W + HR HH T DP+N ++GF H+ + + P ++ ++D+SDLE++
Sbjct: 150 VYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEK 209
Query: 198 VVKFFKKFY-IGLYTPCY 248
+V F +++Y GL C+
Sbjct: 210 LVMFQRRYYKPGLLMMCF 227
Score = 56.4 bits (130), Expect = 5e-08
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKPGEK--SPTDSNSVSLLTTTLWP 457
W ++ +VFV FLRY +VL+A+WL+ SA L+G +P +K SP ++ VSL
Sbjct: 238 WGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGF 297
Query: 458 H-YQYLIPYEYKSGE 499
H Y + PY+Y + E
Sbjct: 298 HNYHHSFPYDYSASE 312
>AL139819-3|CAH72823.1| 242|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 242
Score = 60.5 bits (140), Expect = 3e-09
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSPHQEKLKESIDMSDLESDS 197
+Y+W + HR HH T DP+N ++GF H+ + + P ++ ++D+SDLE++
Sbjct: 150 VYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEK 209
Query: 198 VVKFFKKFY-IGLYTPCY 248
+V F +++Y GL C+
Sbjct: 210 LVMFQRRYYKPGLLMMCF 227
>AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 359
Score = 60.5 bits (140), Expect = 3e-09
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSPHQEKLKESIDMSDLESDS 197
+Y+W + HR HH T DP+N ++GF H+ + + P ++ ++D+SDLE++
Sbjct: 150 VYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEK 209
Query: 198 VVKFFKKFY-IGLYTPCY 248
+V F +++Y GL C+
Sbjct: 210 LVMFQRRYYKPGLLMMCF 227
Score = 57.2 bits (132), Expect = 3e-08
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKPGEK--SPTDSNSVSLLTTTLWP 457
W ++ +VFV FLRY +VL+A+WL+ SA L+G +P +K SP ++ VSL
Sbjct: 238 WGETFQNSVFVATFLRYAVVLNATWLVNSAALLFGYRPYDKNISPRENILVSLGAVGEGF 297
Query: 458 H-YQYLIPYEYKSGE 499
H Y + PY+Y + E
Sbjct: 298 HNYHHSFPYDYSASE 312
>AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 60.5 bits (140), Expect = 3e-09
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSPHQEKLKESIDMSDLESDS 197
+Y+W + HR HH T DP+N ++GF H+ + + P ++ ++D+SDLE++
Sbjct: 150 VYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEK 209
Query: 198 VVKFFKKFY-IGLYTPCY 248
+V F +++Y GL C+
Sbjct: 210 LVMFQRRYYKPGLLLMCF 227
Score = 56.4 bits (130), Expect = 5e-08
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKPGEK--SPTDSNSVSLLTTTLWP 457
W ++ +VFV FLRY +VL+A+WL+ SA L+G +P +K SP ++ VSL
Sbjct: 238 WGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGF 297
Query: 458 H-YQYLIPYEYKSGE 499
H Y + PY+Y + E
Sbjct: 298 HNYHHSFPYDYSASE 312
>AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 366
Score = 60.5 bits (140), Expect = 3e-09
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSPHQEKLKESIDMSDLESDS 197
+Y+W + HR HH T DP+N ++GF H+ + + P ++ ++D+SDLE++
Sbjct: 157 VYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEK 216
Query: 198 VVKFFKKFY-IGLYTPCY 248
+V F +++Y GL C+
Sbjct: 217 LVMFQRRYYKPGLLLMCF 234
Score = 56.4 bits (130), Expect = 5e-08
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKPGEK--SPTDSNSVSLLTTTLWP 457
W ++ +VFV FLRY +VL+A+WL+ SA L+G +P +K SP ++ VSL
Sbjct: 245 WGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGF 304
Query: 458 H-YQYLIPYEYKSGE 499
H Y + PY+Y + E
Sbjct: 305 HNYHHSFPYDYSASE 319
>AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 60.5 bits (140), Expect = 3e-09
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSPHQEKLKESIDMSDLESDS 197
+Y+W + HR HH T DP+N ++GF H+ + + P ++ ++D+SDLE++
Sbjct: 150 VYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEK 209
Query: 198 VVKFFKKFY-IGLYTPCY 248
+V F +++Y GL C+
Sbjct: 210 LVMFQRRYYKPGLLLMCF 227
Score = 56.4 bits (130), Expect = 5e-08
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKPGEK--SPTDSNSVSLLTTTLWP 457
W ++ +VFV FLRY +VL+A+WL+ SA L+G +P +K SP ++ VSL
Sbjct: 238 WGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGF 297
Query: 458 H-YQYLIPYEYKSGE 499
H Y + PY+Y + E
Sbjct: 298 HNYHHSFPYDYSASE 312
>AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase
protein.
Length = 330
Score = 47.6 bits (108), Expect = 2e-05
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHI-LTRMRKLSPHQEKLKESIDMSDLESD 194
I++ + HR HH + T+ DP+N ++GF HI +RK EK ++ +D++DL +D
Sbjct: 124 IFERSRDHRAHHKYSETDADPHNARRGFFFSHIGWLFVRKHRDVIEKGRK-LDVTDLLAD 182
Query: 195 SVVKFFKKFY-IGLYTPCY 248
VV+ +K+Y I + C+
Sbjct: 183 PVVRIQRKYYKISVVLMCF 201
Score = 45.6 bits (103), Expect = 1e-04
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKPGEK--SPTDSNSVSLLTTTLWP 457
W +S+ + F+ LRY I L+ SWL+ SA ++G +P +K SP + V+L
Sbjct: 212 WGESLWNSYFLASILRYTISLNISWLVNSAAHMYGNRPYDKHISPRQNPLVALGAIGEGF 271
Query: 458 H-YQYLIPYEYKSGE 499
H Y + P++Y + E
Sbjct: 272 HNYHHTFPFDYSASE 286
>AC073413-1|AAY40977.1| 256|Homo sapiens unknown protein.
Length = 256
Score = 46.8 bits (106), Expect = 4e-05
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHI-LTRMRKLSPHQEKLKESIDMSDLESD 194
I++W + HR HH + T+ DP+N ++GF HI +RK EK ++ +D++DL +D
Sbjct: 124 IFEWSRDHRAHHKYSETDADPHNARRGFFFSHIGWLFVRKHRDVIEKGRK-LDVTDLLAD 182
Query: 195 SVVK 206
VV+
Sbjct: 183 PVVR 186
>BC048971-1|AAH48971.1| 134|Homo sapiens SCD5 protein protein.
Length = 134
Score = 45.6 bits (103), Expect = 1e-04
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKPGEK--SPTDSNSVSLLTTTLWP 457
W +S+ + F+ LRY I L+ SWL+ SA ++G +P +K SP + V+L
Sbjct: 16 WGESLWNSYFLASILRYTISLNISWLVNSAAHMYGNRPYDKHISPRQNPLVALGAIGEGF 75
Query: 458 H-YQYLIPYEYKSGE 499
H Y + P++Y + E
Sbjct: 76 HNYHHTFPFDYSASE 90
>AL831891-1|CAD38567.1| 160|Homo sapiens hypothetical protein
protein.
Length = 160
Score = 45.6 bits (103), Expect = 1e-04
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKPGEK--SPTDSNSVSLLTTTLWP 457
W +S+ + F+ LRY I L+ SWL+ SA ++G +P +K SP + V+L
Sbjct: 42 WGESLWNSYFLASILRYTISLNISWLVNSAAHMYGNRPYDKHISPRQNPLVALGAIGEGF 101
Query: 458 H-YQYLIPYEYKSGE 499
H Y + P++Y + E
Sbjct: 102 HNYHHTFPFDYSASE 116
>AK024685-1|BAB14961.1| 256|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21032 fis, clone CAE07365. ).
Length = 256
Score = 41.1 bits (92), Expect = 0.002
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHI-LTRMRKLSPHQEKLKESIDMSDLESD 194
I++ + HR HH + T+ DP+N ++GF HI +RK EK ++ +D++DL +D
Sbjct: 124 IFERSRDHRAHHKYSETDADPHNARRGFFFSHIGWLFVRKHRDVIEKGRK-LDVTDLLAD 182
Query: 195 SVVK 206
VV+
Sbjct: 183 PVVR 186
>AB049388-1|BAB56112.1| 437|Homo sapiens conserved ERA-like GTPase
protein.
Length = 437
Score = 29.9 bits (64), Expect = 5.2
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -1
Query: 447 VVVSRDTE---LESVGDFSPGLRPQRHTALSISHDAWSTM 337
V+ ++T+ L++ G SPG + + H LS+ D W +M
Sbjct: 155 VITEKETQVILLDTPGIISPGKQKRHHLELSLLEDTWKSM 194
>BC019094-1|AAH19094.1| 437|Homo sapiens Era G-protein-like 1 (E.
coli) protein.
Length = 437
Score = 29.5 bits (63), Expect = 6.9
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -1
Query: 447 VVVSRDTE---LESVGDFSPGLRPQRHTALSISHDAWSTM 337
V+ ++T+ L++ G SPG + + H LS+ D W +M
Sbjct: 155 VITEKETQVILLDTPGIISPGKQKRHHLELSLLEDPWKSM 194
>AY007435-1|AAG12978.1| 444|Homo sapiens ERA-W protein.
Length = 444
Score = 29.5 bits (63), Expect = 6.9
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -1
Query: 447 VVVSRDTE---LESVGDFSPGLRPQRHTALSISHDAWSTM 337
V+ ++T+ L++ G SPG + + H LS+ D W +M
Sbjct: 162 VITEKETQVILLDTPGIISPGKQKRHHLELSLLEDPWKSM 201
>AF082658-1|AAC31604.1| 282|Homo sapiens Era GTPase B protein
protein.
Length = 282
Score = 29.5 bits (63), Expect = 6.9
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -1
Query: 447 VVVSRDTE---LESVGDFSPGLRPQRHTALSISHDAWSTM 337
V+ ++T+ L++ G SPG + + H LS+ D W +M
Sbjct: 161 VITEKETQVILLDTPGIISPGKQKRHHLELSLLEDPWKSM 200
>AF082657-1|AAC31603.1| 443|Homo sapiens Era GTPase A protein
protein.
Length = 443
Score = 29.5 bits (63), Expect = 6.9
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -1
Query: 447 VVVSRDTE---LESVGDFSPGLRPQRHTALSISHDAWSTM 337
V+ ++T+ L++ G SPG + + H LS+ D W +M
Sbjct: 161 VITEKETQVILLDTPGIISPGKQKRHHLELSLLEDPWKSM 200
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,395,888
Number of Sequences: 237096
Number of extensions: 1555905
Number of successful extensions: 3972
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3972
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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