Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_B02
(501 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 58 5e-09
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 52 2e-07
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 52 2e-07
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 46 1e-05
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 46 1e-05
Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z27078-9|CAA81586.2| 378|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z27078-4|CAB76843.1| 373|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z19153-8|CAD45582.1| 378|Caenorhabditis elegans Hypothetical pr... 27 7.6
AY303580-1|AAP57302.1| 373|Caenorhabditis elegans cell death-re... 27 7.6
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 57.6 bits (133), Expect = 5e-09
Identities = 27/78 (34%), Positives = 41/78 (52%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSPHQEKLKESIDMSDLESDS 197
+ +W + HR HH T+ DP+N +GF H+ + + P ++ +DMSDL SD
Sbjct: 127 VIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGWLLVRKHPQVKEQGAKLDMSDLLSDP 186
Query: 198 VVKFFKKFYIGLYTPCYF 251
V+ F +K Y L C F
Sbjct: 187 VLVFQRKHYFPLVILCCF 204
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKPGEKSPTDSNSVSLLTTTLWP-- 457
W ++ + G RY LHA+W I SA +G KP + S T +V +
Sbjct: 215 WKETAFIAFYTAGTFRYCFTLHATWCINSAAHYFGWKPYDSSITPVENVFTTIAAVGEGG 274
Query: 458 -HYQYLIPYEYKSGE 499
++ + P +Y++ E
Sbjct: 275 HNFHHTFPQDYRTSE 289
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 57.6 bits (133), Expect = 5e-09
Identities = 27/78 (34%), Positives = 41/78 (52%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSPHQEKLKESIDMSDLESDS 197
+ +W + HR HH T+ DP+N +GF H+ + + P ++ +DMSDL SD
Sbjct: 127 VIEWARDHRCHHKWTDTDADPHNTTRGFFFAHMGWLLVRKHPQVKEQGAKLDMSDLLSDP 186
Query: 198 VVKFFKKFYIGLYTPCYF 251
V+ F +K Y L C F
Sbjct: 187 VLVFQRKHYFPLVILCCF 204
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKPGEKSPTDSNSVSLLTTTLWP-- 457
W ++ + G RY LHA+W I SA +G KP + S T +V +
Sbjct: 215 WKETAFIAFYTAGTFRYCFTLHATWCINSAAHYFGWKPYDSSITPVENVFTTIAAVGEGG 274
Query: 458 -HYQYLIPYEYKSGE 499
++ + P +Y++ E
Sbjct: 275 HNFHHTFPQDYRTSE 289
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSPHQEKLKESIDMSDLESDS 197
I +W + HR HH T+ DP+N +GF H+ + + P ++ +D+SDL SD
Sbjct: 126 IIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGWLLVRKHPQVKEHGGKLDLSDLFSDP 185
Query: 198 VVKFFKKFYIGL 233
V+ F +K Y L
Sbjct: 186 VLVFQRKHYFPL 197
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKPGEKSPTDSNSVSLLTTTLWP-- 457
W ++ +V G RY LHA+W I SA +G KP + S + +V +
Sbjct: 214 WKETAFIAFYVAGTFRYCFTLHATWCINSAAHYFGWKPYDTSVSAVENVFTTVVAVGEGG 273
Query: 458 -HYQYLIPYEYKSGE 499
++ + P +Y++ E
Sbjct: 274 HNFHHTFPQDYRASE 288
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSPHQEKLKESIDMSDLESDS 197
I +W + HR HH T+ DP+N +GF H+ + + P ++ +D+SDL SD
Sbjct: 126 IIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGWLLVRKHPQVKEHGGKLDLSDLFSDP 185
Query: 198 VVKFFKKFYIGL 233
V+ F +K Y L
Sbjct: 186 VLVFQRKHYFPL 197
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKPGEKSPTDSNSVSLLTTTLWP-- 457
W ++ +V G RY LHA+W I SA +G KP + S + +V +
Sbjct: 214 WKETAFIAFYVAGTFRYCFTLHATWCINSAAHYFGWKPYDTSVSAVENVFTTVVAVGEGG 273
Query: 458 -HYQYLIPYEYKSGE 499
++ + P +Y++ E
Sbjct: 274 HNFHHTFPQDYRASE 288
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSPHQEKLKESIDMSDLESDS 197
I DW + HR HH T+ DP++ +G H+ + K + +D+SDL D
Sbjct: 118 IIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVKKHDQLKIQGGKLDLSDLYEDP 177
Query: 198 VVKFFKKFYIGL 233
V+ F +K Y+ L
Sbjct: 178 VLMFQRKNYLPL 189
Score = 34.7 bits (76), Expect = 0.038
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKP--GEKSPTDSNSVSLLTTTLWP 457
W +S + RY LHA+W I S G +P + S D+ S+
Sbjct: 206 WGESAFIAFYTAALFRYCFTLHATWCINSVSHWVGWQPYDHQASSVDNLWTSIAAVGEGG 265
Query: 458 H-YQYLIPYEYKSGE 499
H Y + P +Y++ E
Sbjct: 266 HNYHHTFPQDYRTSE 280
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +3
Query: 18 IYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSPHQEKLKESIDMSDLESDS 197
I DW + HR HH T+ DP++ +G H+ + K + +D+SDL D
Sbjct: 118 IIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVKKHDQLKIQGGKLDLSDLYEDP 177
Query: 198 VVKFFKKFYIGL 233
V+ F +K Y+ L
Sbjct: 178 VLMFQRKNYLPL 189
Score = 34.7 bits (76), Expect = 0.038
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +2
Query: 284 WDDSVLATVFVIGFLRYGIVLHASWLIESAVCLWGLKP--GEKSPTDSNSVSLLTTTLWP 457
W +S + RY LHA+W I S G +P + S D+ S+
Sbjct: 206 WGESAFIAFYTAALFRYCFTLHATWCINSVSHWVGWQPYDHQASSVDNLWTSIAAVGEGG 265
Query: 458 H-YQYLIPYEYKSGE 499
H Y + P +Y++ E
Sbjct: 266 HNYHHTFPQDYRTSE 280
>Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 308 QWPKHCHPNIQEVHLEAAIKITRR 237
QW K C P IQ+V +AA + RR
Sbjct: 150 QWHKACFPRIQQVCGQAAKLVDRR 173
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 308 QWPKHCHPNIQEVHLEAAIKITRR 237
QW K C P IQ+V +AA + RR
Sbjct: 379 QWHKACFPRIQQVCGQAAKLVDRR 402
>Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 308 QWPKHCHPNIQEVHLEAAIKITRR 237
QW K C P IQ+V +AA + RR
Sbjct: 150 QWHKACFPRIQQVCGQAAKLVDRR 173
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 308 QWPKHCHPNIQEVHLEAAIKITRR 237
QW K C P IQ+V +AA + RR
Sbjct: 379 QWHKACFPRIQQVCGQAAKLVDRR 402
>Z27078-9|CAA81586.2| 378|Caenorhabditis elegans Hypothetical
protein K04H4.6b protein.
Length = 378
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 12 GSIYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSP 143
GS DW +++L H ++ P + GFL+ + + KL P
Sbjct: 26 GSNVDWFVFYKLPHLWNHPDNVPISNGTGFLYFDVNNKNWKLMP 69
>Z27078-4|CAB76843.1| 373|Caenorhabditis elegans Hypothetical
protein K04H4.6a protein.
Length = 373
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 12 GSIYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSP 143
GS DW +++L H ++ P + GFL+ + + KL P
Sbjct: 26 GSNVDWFVFYKLPHLWNHPDNVPISNGTGFLYFDVNNKNWKLMP 69
>Z19153-8|CAD45582.1| 378|Caenorhabditis elegans Hypothetical
protein K04H4.6b protein.
Length = 378
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 12 GSIYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSP 143
GS DW +++L H ++ P + GFL+ + + KL P
Sbjct: 26 GSNVDWFVFYKLPHLWNHPDNVPISNGTGFLYFDVNNKNWKLMP 69
>AY303580-1|AAP57302.1| 373|Caenorhabditis elegans cell
death-related nuclease 6 protein.
Length = 373
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 12 GSIYDWVQYHRLHHAHFATEDDPYNYKKGFLHCHILTRMRKLSP 143
GS DW +++L H ++ P + GFL+ + + KL P
Sbjct: 26 GSNVDWFVFYKLPHLWNHPDNVPISNGTGFLYFDVNNKNWKLMP 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,096,367
Number of Sequences: 27780
Number of extensions: 257149
Number of successful extensions: 750
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -