Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_B01
(404 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 57 9e-11
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 55 4e-10
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 52 2e-09
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 45 4e-07
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 34 7e-04
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 7.0
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 21 7.0
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 21 7.0
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 20 9.3
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 20 9.3
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 20 9.3
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 20 9.3
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 20 9.3
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 20 9.3
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 56.8 bits (131), Expect = 9e-11
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Frame = +1
Query: 10 YTCKAENINGKTTTSASLEVSVAPKFTLTPKKQNVSPGDNVEFTCSAKGVPKPSLQWYR- 186
Y C AEN G + S +L V+V P++ L P + + G + C A G PKP + W +
Sbjct: 656 YVCTAENAAGTASHSTTLTVNVPPRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKKA 715
Query: 187 -------NTLLLLENNKVIFNNNNQSLTLLDVAKDDEGIYHCRAENDEG 312
T L L N + + +L++ ++ K +EG Y C A N G
Sbjct: 716 AGDTPGDYTDLKLSNPDISVEDG--TLSINNIQKTNEGYYLCEAVNGIG 762
Score = 44.0 bits (99), Expect = 7e-07
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +1
Query: 10 YTCKAENINGKTTTSASLEVSVAPKFTLTPKKQNVSPGDNVEFTCSAKGVPKPSLQWYRN 189
Y C A + G SA L V P KK V+ G+ + TC G P S+ W R+
Sbjct: 469 YKCIAASKVGSAEHSARLNVYGLPFIRHMDKKAIVA-GETLRVTCPVAGYPIESIVWERD 527
Query: 190 TLLLLENNK-VIFNNNNQSLTLLDVAK-DDEGIYHCRAENDEG 312
T +L N K +F N +L + +V + D+ Y C A N +G
Sbjct: 528 TRVLPINRKQKVFPNG--TLIIENVERMSDQATYTCVARNAQG 568
Score = 42.7 bits (96), Expect = 2e-06
Identities = 29/112 (25%), Positives = 46/112 (41%)
Frame = +1
Query: 10 YTCKAENINGKTTTSASLEVSVAPKFTLTPKKQNVSPGDNVEFTCSAKGVPKPSLQWYRN 189
Y C N G + L V+ + P Q + G FTC+ +G P ++ W
Sbjct: 285 YLCIVNNSVGGESVETVLTVTAPLGAEIEPSTQTIDFGRPATFTCNVRGNPIKTVSW--- 341
Query: 190 TLLLLENNKVIFNNNNQSLTLLDVAKDDEGIYHCRAENDEGIIETDALLTRG 345
L++ K + L + V K+D+G+Y C ND+ + A L G
Sbjct: 342 ----LKDGKPL-GLEEAVLRIESVKKEDKGMYQCFVRNDQESAQATAELKLG 388
Score = 34.3 bits (75), Expect = 5e-04
Identities = 30/119 (25%), Positives = 45/119 (37%), Gaps = 10/119 (8%)
Frame = +1
Query: 10 YTCKAENINGKTTTSASLEVS---VAPKFTLTPKKQNVSPGDNVEFTCSAKGVPKPSLQW 180
Y C N +A L++ P+ ++ + PG ++ C A G P P + W
Sbjct: 368 YQCFVRNDQESAQATAELKLGGRFEPPQIRQAFAEETLQPGPSMFLKCVASGNPTPEITW 427
Query: 181 ------YRNTLLLLENNKVIFNNNNQS-LTLLDVAKDDEGIYHCRAENDEGIIETDALL 336
NT L V N + S L + +D G+Y C A + G E A L
Sbjct: 428 ELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSTHTNDGGLYKCIAASKVGSAEHSARL 486
Score = 31.1 bits (67), Expect = 0.005
Identities = 25/114 (21%), Positives = 41/114 (35%), Gaps = 9/114 (7%)
Frame = +1
Query: 10 YTCKAEN-INGKTTTSASLEVSVAPKFTLTPKKQNVSPGDNVEFTCSAKGVPKPSLQWYR 186
Y C+A N I + + V P F + K Q G+ C A+G + W
Sbjct: 753 YLCEAVNGIGAGLSAVIFISVQAPPHFEIKLKNQTARRGEPAVLQCEAQGEKPIGILWNM 812
Query: 187 NTLLL--------LENNKVIFNNNNQSLTLLDVAKDDEGIYHCRAENDEGIIET 324
N L +++ N L++ + D ++ C A N G +T
Sbjct: 813 NNKRLDPKSDSRYTIREEILANGVLSDLSIKRTERSDSALFTCVATNAFGSDDT 866
Score = 30.3 bits (65), Expect = 0.009
Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Frame = +1
Query: 70 SVAPKFTLTPKKQNVSPGDNVEFT--CSAKGVPKPSLQWYRNTLLLLENNKVIFNNN--- 234
SV PKF +S + C A+G P P +WY+ V N
Sbjct: 208 SVRPKFPSMDNINGLSTESKADLPLLCPAQGFPVPVHRWYKFIEGSSRRQPVQLNERVRQ 267
Query: 235 -NQSLTLLDVAKDDEGIYHCRAENDEGIIETDALLT 339
+ +L + + +D G Y C N G + +LT
Sbjct: 268 VSGTLIIREARVEDSGKYLCIVNNSVGGESVETVLT 303
Score = 27.1 bits (57), Expect = 0.081
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 97 PKKQNVSPGDNVEFTCSAKGVPKPSLQWYR 186
P + + S G C A+G P+P + W R
Sbjct: 10 PNRVDFSNGTGAVVECQARGNPQPDIIWVR 39
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 54.8 bits (126), Expect = 4e-10
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Frame = +1
Query: 10 YTCKAENINGKTTTSASLEVSVAPKFTLTPKKQNVSPGDNVEFTCSAKGVPKPSLQWYRN 189
YTC A N + +A L+V V P++ + P +V +V C A+GVP P++ W +
Sbjct: 687 YTCVAANPAAEVRYTAKLQVKVPPRWIVEPTDVSVERNKHVALHCQAQGVPTPTIVWKKA 746
Query: 190 T------LLLLENNKVIFNNNNQSLTLLDVAKDDEGIYHCRAENDEG 312
T L +N +L L V +D EG Y C+A N G
Sbjct: 747 TGSKSGEYEELRERAYTKILSNGTLLLQHVKEDREGFYLCQASNGIG 793
Score = 52.4 bits (120), Expect = 2e-09
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +1
Query: 10 YTCKAENINGKTTTSASLEVSVAPKFTLTPKKQNVSPGDNVEFTCSAKGVPKPSLQWYR- 186
Y+C AEN GK T +A L V P L PK V+ G+ + C G P ++W R
Sbjct: 497 YSCMAENRAGKVTHAARLNVYGLPYIRLIPKVTAVA-GETLRLKCPVAGYPIEEIKWERA 555
Query: 187 NTLLLLENNKVIFNNNNQSLTLLDVAKDDEGIYHCRAENDEG 312
N L + + + + +T + K D G+Y C A N +G
Sbjct: 556 NRELPDDLRQKVLPDGTLVITSVQ-KKGDAGVYTCSARNKQG 596
Score = 43.6 bits (98), Expect = 9e-07
Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Frame = +1
Query: 10 YTCKAENINGKTT-TSASLEVSVAPKFTLTPK-KQNVSPGDNVEFTCSAKGVPKPSLQWY 183
Y C G T SA L++ AP L +Q + PG V CSA G P P + W
Sbjct: 397 YQCIVRRSEGDTAQASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTWA 456
Query: 184 RNTLLLLENNK-------VIFNNNNQSLTLLDVAKDDEGIYHCRAENDEGIIETDALL 336
+ L N + + + + + V +D G Y C AEN G + A L
Sbjct: 457 LDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAENRAGKVTHAARL 514
Score = 43.2 bits (97), Expect = 1e-06
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +1
Query: 10 YTCKAENINGKTTTSASLEVSVAPKFTLTPKKQNVSPGDNVEFTCSAKGVPKPS---LQW 180
Y C A N G+ + L V+ +TP +V G N EF C P+ + W
Sbjct: 308 YRCSASNPGGEASAEIRLIVTAPLHVEVTPPLLSVHLGGNAEFRCEVSTHPQAGPHFITW 367
Query: 181 YRNTLLLLENNKVIFNNNNQSLTLLDVAKDDEGIYHCRAENDEG 312
Y++ L + ++ L L + ++D G+Y C EG
Sbjct: 368 YKDGRQLPGTGR-----QSELLRLNGINREDRGMYQCIVRRSEG 406
Score = 35.5 bits (78), Expect = 2e-04
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +1
Query: 109 NVSPGDNVEFTCSAKGVPKPSLQWYRNT----LLLLENNKVIFNNNNQSLTLLDVAKDDE 276
+V+ ++ C A+ P P +WY T +L+L + + L L V +D
Sbjct: 248 HVAQDESTSLVCVAQACPTPEYRWYAQTGSEPMLVLSGPRTRLLGS--VLALEAVTLEDN 305
Query: 277 GIYHCRAENDEG 312
GIY C A N G
Sbjct: 306 GIYRCSASNPGG 317
Score = 29.5 bits (63), Expect = 0.015
Identities = 25/108 (23%), Positives = 37/108 (34%), Gaps = 10/108 (9%)
Frame = +1
Query: 10 YTCKAEN-INGKTTTSASLEVSVAPKFTLTPKKQNVSPGDNVEFTCSAKGVPKPSLQWYR 186
Y C+A N I L+V+ +P F + V GD C G ++ W +
Sbjct: 784 YLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTATLHCEVHGDTPVTVTWLK 843
Query: 187 NTLLLLE---NNKVIFNNN------NQSLTLLDVAKDDEGIYHCRAEN 303
+ L N +V L + D G Y C+A N
Sbjct: 844 GGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASDSGAYFCQASN 891
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 52.4 bits (120), Expect = 2e-09
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +1
Query: 10 YTCKAENINGKTTTSASLEVSVAPKFTLTPKKQNVSPGDNVEFTCSAKGVPKPSLQWYR- 186
Y+C AEN GK T +A L V P L PK V+ G+ + C G P ++W R
Sbjct: 497 YSCMAENRAGKVTHAARLNVYGLPYIRLIPKVTAVA-GETLRLKCPVAGYPIEEIKWERA 555
Query: 187 NTLLLLENNKVIFNNNNQSLTLLDVAKDDEGIYHCRAENDEG 312
N L + + + + +T + K D G+Y C A N +G
Sbjct: 556 NRELPDDLRQKVLPDGTLVITSVQ-KKGDAGVYTCSARNKQG 596
Score = 52.0 bits (119), Expect = 2e-09
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Frame = +1
Query: 10 YTCKAENINGKTTTSASLEVSVAPKFTLTPKKQNVSPGDNVEFTCSAKGVPKPSLQWYRN 189
Y+C A N+ + + + L V V P++ + P +V +V C A+GVP P++ W +
Sbjct: 683 YSCVARNLAAEVSHTQRLVVHVPPRWIVEPTDVSVERNKHVALHCQAQGVPTPTIVWKKA 742
Query: 190 T------LLLLENNKVIFNNNNQSLTLLDVAKDDEGIYHCRAENDEG 312
T L +N +L L V +D EG Y C+A N G
Sbjct: 743 TGSKSGEYEELRERAYTKILSNGTLLLQHVKEDREGFYLCQASNGIG 789
Score = 43.6 bits (98), Expect = 9e-07
Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Frame = +1
Query: 10 YTCKAENINGKTT-TSASLEVSVAPKFTLTPK-KQNVSPGDNVEFTCSAKGVPKPSLQWY 183
Y C G T SA L++ AP L +Q + PG V CSA G P P + W
Sbjct: 397 YQCIVRRSEGDTAQASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTWA 456
Query: 184 RNTLLLLENNK-------VIFNNNNQSLTLLDVAKDDEGIYHCRAENDEGIIETDALL 336
+ L N + + + + + V +D G Y C AEN G + A L
Sbjct: 457 LDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAENRAGKVTHAARL 514
Score = 43.2 bits (97), Expect = 1e-06
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +1
Query: 10 YTCKAENINGKTTTSASLEVSVAPKFTLTPKKQNVSPGDNVEFTCSAKGVPKPS---LQW 180
Y C A N G+ + L V+ +TP +V G N EF C P+ + W
Sbjct: 308 YRCSASNPGGEASAEIRLIVTAPLHVEVTPPLLSVHLGGNAEFRCEVSTHPQAGPHFITW 367
Query: 181 YRNTLLLLENNKVIFNNNNQSLTLLDVAKDDEGIYHCRAENDEG 312
Y++ L + ++ L L + ++D G+Y C EG
Sbjct: 368 YKDGRQLPGTGR-----QSELLRLNGINREDRGMYQCIVRRSEG 406
Score = 35.5 bits (78), Expect = 2e-04
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +1
Query: 109 NVSPGDNVEFTCSAKGVPKPSLQWYRNT----LLLLENNKVIFNNNNQSLTLLDVAKDDE 276
+V+ ++ C A+ P P +WY T +L+L + + L L V +D
Sbjct: 248 HVAQDESTSLVCVAQACPTPEYRWYAQTGSEPMLVLSGPRTRLLGS--VLALEAVTLEDN 305
Query: 277 GIYHCRAENDEG 312
GIY C A N G
Sbjct: 306 GIYRCSASNPGG 317
Score = 29.5 bits (63), Expect = 0.015
Identities = 25/108 (23%), Positives = 37/108 (34%), Gaps = 10/108 (9%)
Frame = +1
Query: 10 YTCKAEN-INGKTTTSASLEVSVAPKFTLTPKKQNVSPGDNVEFTCSAKGVPKPSLQWYR 186
Y C+A N I L+V+ +P F + V GD C G ++ W +
Sbjct: 780 YLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTATLHCEVHGDTPVTVTWLK 839
Query: 187 NTLLLLE---NNKVIFNNN------NQSLTLLDVAKDDEGIYHCRAEN 303
+ L N +V L + D G Y C+A N
Sbjct: 840 GGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASDSGAYFCQASN 887
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 44.8 bits (101), Expect = 4e-07
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 121 GDNVEFTCSAKGVPKPSLQWYRNTL-LLLENNKVIFNNNNQSLTLLDVAKDDEGIYHCRA 297
GDNVE C G P P L W RN L N I N+ SL L V G Y C A
Sbjct: 325 GDNVEIKCDVTGTPPPPLVWRRNGADLETLNEPEIRVFNDGSLYLTKVQLIHAGNYTCHA 384
Query: 298 ENDEGIIETDAL 333
++ +++T L
Sbjct: 385 VRNQDVVQTHVL 396
Score = 44.8 bits (101), Expect = 4e-07
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Frame = +1
Query: 1 ARGYTCKAENINGKTTTSASLEVSVAPKFTLTPKKQNVSPGDNVEFTCSAKGVPKPSLQW 180
A YTC A N + L + P+ +TP+ Q + C G P P +QW
Sbjct: 377 AGNYTCHAVR-NQDVVQTHVLTIHTIPEVKVTPRFQAKRLKEEANIRCHVAGEPLPRVQW 435
Query: 181 YRNTLLLLEN--NKVIFNNNNQSLTLLDVAKDDEGIYHCRAENDEGI 315
+N L + +K N L + +V D G Y C+A + GI
Sbjct: 436 LKNDEALNHDQPDKYDLIGNGTKLIIKNVDYADTGAYMCQASSIGGI 482
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 33.9 bits (74), Expect = 7e-04
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Frame = +1
Query: 121 GDNVEFTCSAKGVPKPSLQWYRNTLLLLENNKV------IFNNNNQSLTLLDVA-KDDEG 279
G + F C A G P+P + W ++ + L + + N+ +S +D A + D G
Sbjct: 37 GRKITFFCMATGFPRPEITWLKDGIELYHHKFFQVHEWPVGNDTLKSKMEIDPATQKDAG 96
Query: 280 IYHCRAENDEGI 315
Y C+A+N +
Sbjct: 97 YYECQADNQYAV 108
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 7.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 208 NNKVIFNNNNQSLTL 252
NNK +NNNN + L
Sbjct: 101 NNKYNYNNNNYNKKL 115
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 20.6 bits (41), Expect = 7.0
Identities = 7/28 (25%), Positives = 13/28 (46%)
Frame = -1
Query: 209 FSSNNNVFLYHCSDGLGTPLAEQVNSTL 126
+ ++ L+HC D G L + N +
Sbjct: 98 YLKERHITLHHCYDADGIKLMNEENGVM 125
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 20.6 bits (41), Expect = 7.0
Identities = 7/28 (25%), Positives = 13/28 (46%)
Frame = -1
Query: 209 FSSNNNVFLYHCSDGLGTPLAEQVNSTL 126
+ ++ L+HC D G L + N +
Sbjct: 98 YLKERHITLHHCYDADGIKLMNEENGVM 125
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +1
Query: 334 LTRGRLSNNNPSHNYATRRY 393
L+ + NNN +NY Y
Sbjct: 84 LSNNTIHNNNYKYNYNNNNY 103
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +1
Query: 334 LTRGRLSNNNPSHNYATRRY 393
L+ + NNN +NY Y
Sbjct: 84 LSNNTIHNNNYKYNYNNNNY 103
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +1
Query: 334 LTRGRLSNNNPSHNYATRRY 393
L+ + NNN +NY Y
Sbjct: 85 LSNNTIHNNNYKYNYNNNNY 104
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +1
Query: 334 LTRGRLSNNNPSHNYATRRY 393
L+ + NNN +NY Y
Sbjct: 85 LSNNTIHNNNYKYNYNNNNY 104
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +1
Query: 334 LTRGRLSNNNPSHNYATRRY 393
L+ + NNN +NY Y
Sbjct: 85 LSNNTIHNNNYKYNYNNNNY 104
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +1
Query: 334 LTRGRLSNNNPSHNYATRRY 393
L+ + NNN +NY Y
Sbjct: 85 LSNNTIHNNNYKYNYNNNNY 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.313 0.130 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,132
Number of Sequences: 438
Number of extensions: 2546
Number of successful extensions: 47
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.0 bits)
- SilkBase 1999-2023 -