Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_A24
(390 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0907 + 7001946-7002050,7002389-7002476,7002606-7002679,700... 64 3e-11
02_05_1357 + 35899480-35899578,35900247-35900334,35900438-359005... 64 4e-11
02_05_0708 - 31103246-31103359,31104146-31104178,31104297-311043... 64 4e-11
02_02_0624 - 12323702-12323777,12324219-12324304,12324360-123244... 64 4e-11
02_01_0155 - 1080923-1081024,1081111-1081176,1081306-1081370,108... 64 4e-11
05_06_0061 + 25274693-25274794,25274982-25275069,25275186-252752... 64 5e-11
01_01_0909 - 7163886-7163931,7164148-7164254,7164370-7164435,716... 53 7e-08
07_01_0926 - 7775536-7775616,7775695-7775787,7775903-7775965,777... 36 0.015
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 36 0.015
05_07_0205 - 28402436-28402505,28402604-28402681,28402789-284029... 35 0.026
01_05_0673 + 24183512-24183514,24183625-24183694,24184203-241842... 35 0.026
01_01_0893 + 7043130-7043182,7043309-7043335,7043461-7043560,704... 35 0.026
10_03_0038 - 7297210-7297248,7297361-7297429,7297524-7297731,729... 33 0.080
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 33 0.080
04_04_0191 + 23468410-23468455,23468560-23468699,23469119-234692... 33 0.080
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 33 0.080
02_04_0402 + 22618998-22619043,22619206-22619345,22620067-226201... 33 0.080
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 33 0.080
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 33 0.080
11_06_0708 + 26475306-26478404 32 0.14
11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166 32 0.14
03_06_0407 - 33714563-33714636,33714966-33715152,33715943-337160... 32 0.14
11_06_0698 + 26385989-26389090 31 0.32
09_06_0029 + 20336634-20336881,20337737-20338208 31 0.32
08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130... 31 0.32
06_03_1387 - 29820358-29821035 31 0.43
05_03_0590 - 15884485-15884489,15884702-15884790,15885086-158852... 31 0.43
10_08_0165 + 15356748-15356811,15357113-15357186,15357311-153573... 30 0.57
09_02_0464 - 9591139-9591571,9592601-9592818 30 0.75
06_03_0414 - 20548577-20549006,20553521-20553744 30 0.75
05_07_0127 - 27872803-27873238,27873842-27874059 30 0.75
05_06_0082 - 25425050-25425479,25426551-25426783 30 0.75
03_01_0647 + 4745788-4745907,4746510-4746591,4746847-4746958,474... 30 0.75
03_01_0365 - 2839190-2839251,2839637-2839694,2839946-2840032,284... 30 0.75
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 30 0.75
11_06_0707 + 26467214-26470309 29 0.99
11_06_0696 + 26358713-26359779,26359826-26360110,26360177-263603... 29 1.3
09_02_0222 + 5968232-5968467,5970811-5971187,5972216-5972256,597... 29 1.3
07_03_0473 - 18525712-18525858,18526049-18526162,18526442-185265... 29 1.3
05_01_0036 + 253734-253904,255216-255707 29 1.3
01_06_0712 + 31397167-31397402,31399823-31400252 29 1.3
03_06_0637 - 35219212-35219754,35220405-35220587 29 1.7
10_06_0181 - 11532765-11533203,11536867-11537036 28 2.3
03_06_0501 - 34380155-34380637,34380961-34381029,34382206-343822... 28 2.3
01_06_1343 - 36461476-36461961,36463355-36463519 28 2.3
05_01_0037 - 256891-256998,257347-257502,257753-257824,258737-25... 28 3.0
09_03_0058 + 11950668-11950701,11951068-11951106,11951586-119519... 27 4.0
05_03_0286 - 11623575-11624063,11625098-11625262 27 4.0
03_06_0408 - 33722741-33722893,33723174-33723350,33723798-337239... 27 4.0
07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703... 27 5.3
01_06_1314 + 36215607-36215734,36215911-36216043,36216135-362162... 27 7.0
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 26 9.2
>06_01_0907 +
7001946-7002050,7002389-7002476,7002606-7002679,
7002829-7002892,7004355-7004419,7004557-7004622,
7004725-7004757,7004968-7005045,7005295-7005303
Length = 193
Score = 64.5 bits (150), Expect = 3e-11
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = +2
Query: 212 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
S + IKCV VGDGAVGKTC+LI YT+NKFP++YVPT
Sbjct: 4 SASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPT 40
>02_05_1357 +
35899480-35899578,35900247-35900334,35900438-35900592,
35900652-35900715,35902910-35902974,35903061-35903126,
35903644-35903745
Length = 212
Score = 64.1 bits (149), Expect = 4e-11
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = +2
Query: 212 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
S + IKCV VGDGAVGKTC+LISYT+N FP++YVPT
Sbjct: 2 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPT 38
>02_05_0708 -
31103246-31103359,31104146-31104178,31104297-31104362,
31104532-31104596,31105456-31105519,31105629-31105738,
31105886-31105973,31106328-31106432
Length = 214
Score = 64.1 bits (149), Expect = 4e-11
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = +2
Query: 212 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
S + IKCV VGDGAVGKTC+LI YT+NKFP++Y+PT
Sbjct: 4 SASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPT 40
>02_02_0624 -
12323702-12323777,12324219-12324304,12324360-12324425,
12324650-12324762,12324793-12324856,12324950-12325059,
12325473-12325560,12325651-12325749
Length = 233
Score = 64.1 bits (149), Expect = 4e-11
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = +2
Query: 212 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
S + IKCV VGDGAVGKTC+LISYT+N FP++YVPT
Sbjct: 2 STARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPT 38
>02_01_0155 -
1080923-1081024,1081111-1081176,1081306-1081370,
1081938-1082001,1082359-1082507,1082591-1082678,
1083757-1083855
Length = 210
Score = 64.1 bits (149), Expect = 4e-11
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = +2
Query: 212 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
S + IKCV VGDGAVGKTC+LISYT+N FP++YVPT
Sbjct: 2 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPT 38
>05_06_0061 +
25274693-25274794,25274982-25275069,25275186-25275295,
25275542-25275605,25275713-25275777,25275864-25275929,
25276084-25276199,25276382-25276415
Length = 214
Score = 63.7 bits (148), Expect = 5e-11
Identities = 25/32 (78%), Positives = 30/32 (93%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
IKCV VGDGAVGKTC+LI YT+NKFP++Y+PT
Sbjct: 8 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPT 39
>01_01_0909 -
7163886-7163931,7164148-7164254,7164370-7164435,
7164720-7164784,7164937-7165000,7165685-7165794,
7165972-7166059,7166100-7166297
Length = 247
Score = 53.2 bits (122), Expect = 7e-08
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKFPS 307
IKCV VGDGAVGKTC+LI YT NKFP+
Sbjct: 11 IKCVTVGDGAVGKTCMLICYTCNKFPT 37
>07_01_0926 -
7775536-7775616,7775695-7775787,7775903-7775965,
7776326-7776423,7776661-7776761,7776865-7776937,
7778575-7778647
Length = 193
Score = 35.5 bits (78), Expect = 0.015
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
IK +++GD VGK+CLL+ ++ F + ++ T
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITT 47
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 35.5 bits (78), Expect = 0.015
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
IK +++GD VGK+CLL+ ++ F + ++ T
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITT 47
>05_07_0205 -
28402436-28402505,28402604-28402681,28402789-28402968,
28403051-28403140,28403258-28403375,28403461-28403517,
28404155-28404224,28404317-28404319
Length = 221
Score = 34.7 bits (76), Expect = 0.026
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 224 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
+ K V+VGDG GKT + + T +F +Y PT
Sbjct: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPT 45
>01_05_0673 +
24183512-24183514,24183625-24183694,24184203-24184259,
24184348-24184465,24185044-24185133,24185209-24185388,
24185474-24185551,24185642-24185711
Length = 221
Score = 34.7 bits (76), Expect = 0.026
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 224 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
+ K V+VGDG GKT + + T +F +Y PT
Sbjct: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPT 45
>01_01_0893 +
7043130-7043182,7043309-7043335,7043461-7043560,
7045110-7045256,7045342-7045422,7045509-7045654,
7046030-7046099
Length = 207
Score = 34.7 bits (76), Expect = 0.026
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
+K +++GD VGKT L+ Y KF ++Y T
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKAT 40
>10_03_0038 -
7297210-7297248,7297361-7297429,7297524-7297731,
7297829-7297911,7298859-7298998,7299132-7299183
Length = 196
Score = 33.1 bits (72), Expect = 0.080
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K V +GD VGK+CLL+ +T +F
Sbjct: 10 KFVTIGDAGVGKSCLLLQFTDKRF 33
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 33.1 bits (72), Expect = 0.080
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 224 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
+ K ++VGDG GKT + + T +F Y PT
Sbjct: 441 SFKLILVGDGGTGKTTFVKRHITGEFEKRYEPT 473
>04_04_0191 +
23468410-23468455,23468560-23468699,23469119-23469201,
23469346-23469550,23469632-23469735,23470290-23470449
Length = 245
Score = 33.1 bits (72), Expect = 0.080
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K +++GD VGK+CLL+ +T +F
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRF 31
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 33.1 bits (72), Expect = 0.080
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++GD VGK+CLL+ + + + Y+ T
Sbjct: 26 KLLLIGDSGVGKSCLLLRFADDSYLDSYIST 56
>02_04_0402 +
22618998-22619043,22619206-22619345,22620067-22620149,
22620234-22620438,22620524-22620592,22621099-22621188
Length = 210
Score = 33.1 bits (72), Expect = 0.080
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K +++GD VGK+CLL+ +T +F
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRF 31
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 33.1 bits (72), Expect = 0.080
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++GD VGK+CLL+ + + + Y+ T
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYIST 40
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 33.1 bits (72), Expect = 0.080
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++GD VGK+CLL+ + + + Y+ T
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYIST 40
>11_06_0708 + 26475306-26478404
Length = 1032
Score = 32.3 bits (70), Expect = 0.14
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 119 AEVAMVSKRVVSNSKKITSKYLVYDKKNYY*SKMQTIKCVVVGDGAVGKTCL 274
AE +V K ++ S+K+ S+ L + +K Y K ++G G +GKT L
Sbjct: 165 AESNLVGKEILHASRKLVSQVLTHKEKKTY-------KLAIIGTGGIGKTTL 209
>11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166
Length = 940
Score = 32.3 bits (70), Expect = 0.14
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 119 AEVAMVSKRVVSNSKKITSKYLVYDKKNYY*SKMQTIKCVVVGDGAVGKTCL 274
AE +V K ++ S+K+ S+ L + +K Y K ++G G +GKT L
Sbjct: 165 AESNLVGKEILHASRKLVSQVLTHKEKKTY-------KLAIIGTGGIGKTTL 209
>03_06_0407 -
33714563-33714636,33714966-33715152,33715943-33716093,
33716520-33716632,33717022-33717085,33717180-33717391,
33717540-33717621,33717811-33717866,33718004-33718072,
33718524-33718772,33718873-33719049,33719556-33719702,
33719794-33719926,33720093-33720307
Length = 642
Score = 32.3 bits (70), Expect = 0.14
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 221 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVP 319
Q ++ VV+GD GK+ L++S T FP E VP
Sbjct: 14 QGVRVVVIGDPGTGKSSLVVSVATEAFP-ENVP 45
>11_06_0698 + 26385989-26389090
Length = 1033
Score = 31.1 bits (67), Expect = 0.32
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 122 EVAMVSKRVVSNSKKITSKYLVYDKKNYY*SKMQTIKCVVVGDGAVGKTCL 274
E +V K V+ +++ L + KKN Y K +VG G VGKT L
Sbjct: 167 EPNLVGKEVIRACREVVDLVLAHKKKNVY-------KLAIVGTGGVGKTTL 210
>09_06_0029 + 20336634-20336881,20337737-20338208
Length = 239
Score = 31.1 bits (67), Expect = 0.32
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K VVVGD AVGKT LL +T ++F
Sbjct: 24 KVVVVGDSAVGKTQLLGRFTKDEF 47
>08_02_1318 -
26111031-26111276,26112139-26112427,26112936-26113036,
26113628-26113878,26114842-26114865,26115793-26116129
Length = 415
Score = 31.1 bits (67), Expect = 0.32
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K V++GD AVGK+ LL Y N+F
Sbjct: 15 KVVIIGDSAVGKSNLLSRYARNEF 38
>06_03_1387 - 29820358-29821035
Length = 225
Score = 30.7 bits (66), Expect = 0.43
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K VV+GD AVGKT LL +T ++F
Sbjct: 9 KVVVIGDSAVGKTQLLGRFTKDEF 32
>05_03_0590 -
15884485-15884489,15884702-15884790,15885086-15885251,
15885333-15885393,15886256-15886392,15887936-15888002
Length = 174
Score = 30.7 bits (66), Expect = 0.43
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 224 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
+ K V++GDG VGKT L++ Y + F + T
Sbjct: 14 SFKLVLLGDGRVGKTSLVLRYVNDVFSDKQEAT 46
>10_08_0165 +
15356748-15356811,15357113-15357186,15357311-15357394,
15357508-15357602,15357737-15357790,15357791-15357896,
15358236-15358277,15358585-15358674,15358788-15358984,
15359355-15359413,15360166-15362252
Length = 983
Score = 30.3 bits (65), Expect = 0.57
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKF-PSEYVPTSA 328
+K V++GD VGK+C+++ + +F P+ V A
Sbjct: 45 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 79
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 29.9 bits (64), Expect = 0.75
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSE 310
K V++GD VGK+ LL +T N+F E
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLE 40
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 29.9 bits (64), Expect = 0.75
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSE 310
K V++GD VGK+ LL +T N+F E
Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEFSLE 42
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 29.9 bits (64), Expect = 0.75
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSE 310
K V++GD VGK+ LL +T N+F E
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLE 40
>05_06_0082 - 25425050-25425479,25426551-25426783
Length = 220
Score = 29.9 bits (64), Expect = 0.75
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSE 310
K V++GD VGK+ LL +T N+F E
Sbjct: 19 KVVLIGDSGVGKSNLLSRFTKNEFSLE 45
>03_01_0647 +
4745788-4745907,4746510-4746591,4746847-4746958,
4747607-4747697,4747805-4747969
Length = 189
Score = 29.9 bits (64), Expect = 0.75
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 212 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEY 313
S + K V +GD AVGKT ++ + +KF + Y
Sbjct: 6 SALAKYKLVFLGDQAVGKTAIITRFMYDKFDATY 39
>03_01_0365 -
2839190-2839251,2839637-2839694,2839946-2840032,
2840117-2840206,2840575-2840650,2840877-2840971,
2841090-2841173,2841270-2841343,2841803-2841827
Length = 216
Score = 29.9 bits (64), Expect = 0.75
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 212 SKMQTIKCVVVGDGAVGKTCLLISYTTNKF-PSEYVPTSA 328
SK K V++GD VGK+C+++ + +F P+ V A
Sbjct: 27 SKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 66
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 29.9 bits (64), Expect = 0.75
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 224 TIKCVVVGDGAVGKTCLLISY-TTNKFPSEYVPT 322
+ K +++GD AVGK+ LL+S+ + + E PT
Sbjct: 12 SFKILLIGDSAVGKSSLLVSFVSASHIDDEIAPT 45
>11_06_0707 + 26467214-26470309
Length = 1031
Score = 29.5 bits (63), Expect = 0.99
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 122 EVAMVSKRVVSNSKKITSKYLVYDKKNYY*SKMQTIKCVVVGDGAVGKTCL 274
E +V K V+ +++ L KKN Y K +VG G VGKT L
Sbjct: 167 EPNLVGKEVIRACREVVDLVLARKKKNVY-------KLAIVGTGGVGKTTL 210
>11_06_0696 +
26358713-26359779,26359826-26360110,26360177-26360356,
26360516-26360585,26361051-26361950
Length = 833
Score = 29.1 bits (62), Expect = 1.3
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 122 EVAMVSKRVVSNSKKITSKYLVYDKKNYY*SKMQTIKCVVVGDGAVGKTCL 274
E +V K VV +++ L + KN Y K +VG G VGKT L
Sbjct: 167 EPNLVGKEVVHACREVVDLVLAHKAKNVY-------KLAIVGTGGVGKTTL 210
>09_02_0222 +
5968232-5968467,5970811-5971187,5972216-5972256,
5972808-5972843
Length = 229
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K V++GD AVGK+ LL + N+F
Sbjct: 20 KVVLIGDSAVGKSQLLARFARNEF 43
>07_03_0473 -
18525712-18525858,18526049-18526162,18526442-18526522,
18526787-18526865,18526902-18526996,18527092-18527170,
18527339-18527450,18527682-18527770,18527868-18527938,
18528846-18528962
Length = 327
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 212 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
S + K V +GD +VGKT ++ + +KF + Y T
Sbjct: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQAT 41
>05_01_0036 + 253734-253904,255216-255707
Length = 220
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K V++GD VGK+ LL +T N+F
Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEF 39
>01_06_0712 + 31397167-31397402,31399823-31400252
Length = 221
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K V++GD VGK+ LL +T N+F
Sbjct: 20 KTVLIGDSGVGKSNLLSRFTKNEF 43
>03_06_0637 - 35219212-35219754,35220405-35220587
Length = 241
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K V++GD VGK+ LL +T N F
Sbjct: 20 KIVLIGDSGVGKSNLLSRFTRNSF 43
>10_06_0181 - 11532765-11533203,11536867-11537036
Length = 202
Score = 28.3 bits (60), Expect = 2.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K V++GD AVGK+ +L + N+F
Sbjct: 12 KVVLIGDSAVGKSQILARFARNEF 35
>03_06_0501 -
34380155-34380637,34380961-34381029,34382206-34382229,
34382622-34382786
Length = 246
Score = 28.3 bits (60), Expect = 2.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K V++GD VGK+ +L +T N+F
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEF 37
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 28.3 bits (60), Expect = 2.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K V++GD VGK+ +L +T N+F
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEF 37
>05_01_0037 -
256891-256998,257347-257502,257753-257824,258737-258784,
259071-259143,259237-259250
Length = 156
Score = 27.9 bits (59), Expect = 3.0
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISY 286
K +++GD +VGK+CLL+ +
Sbjct: 10 KLLLIGDSSVGKSCLLLRF 28
>09_03_0058 +
11950668-11950701,11951068-11951106,11951586-11951982,
11952016-11952314,11953743-11956795
Length = 1273
Score = 27.5 bits (58), Expect = 4.0
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 161 KKITSKYLVYDKKNYY*SKMQTIKCV-VVGDGAVGKTCLLI 280
K++T + V D K +K++ + + +VG G VGKT L I
Sbjct: 450 KQVTEVHAVSDSKR---AKLENVSVLPIVGSGGVGKTTLAI 487
>05_03_0286 - 11623575-11624063,11625098-11625262
Length = 217
Score = 27.5 bits (58), Expect = 4.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K V++GD VGK+ +L +T N F
Sbjct: 14 KMVLIGDSGVGKSNILSRFTRNHF 37
>03_06_0408 -
33722741-33722893,33723174-33723350,33723798-33723947,
33724085-33724145,33724338-33724558
Length = 253
Score = 27.5 bits (58), Expect = 4.0
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKFPSE 310
++ V+GD GK+ L+ + T +FP +
Sbjct: 15 VRVAVIGDHGTGKSSLVATIATGRFPDQ 42
>07_03_1397 +
26269186-26269525,26269727-26269932,26270225-26270327,
26270570-26270577
Length = 218
Score = 27.1 bits (57), Expect = 5.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K V++GD +VGK+ LL + N+F
Sbjct: 16 KIVLLGDSSVGKSNLLARFARNEF 39
>01_06_1314 +
36215607-36215734,36215911-36216043,36216135-36216281,
36217172-36217348,36217469-36217717,36217917-36217964,
36218364-36218419,36218639-36218720,36219260-36219515,
36219563-36219629,36219688-36219724,36219918-36220030,
36220838-36220988,36221352-36221538,36221768-36221841
Length = 634
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 221 QTIKCVVVGDGAVGKTCLLISYTT 292
Q+++ VV+GD GK+ L++S T
Sbjct: 14 QSLRVVVIGDPGTGKSSLVVSAAT 37
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 26.2 bits (55), Expect = 9.2
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 224 TIKCVVVGDGAVGKTCLLISY 286
+ K +++GD VGK+ LL+S+
Sbjct: 19 SFKILLIGDSGVGKSSLLVSF 39
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,895,214
Number of Sequences: 37544
Number of extensions: 171058
Number of successful extensions: 403
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 403
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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