Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_A24
(390 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 79 1e-15
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 79 1e-15
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 72 1e-13
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 72 1e-13
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 72 1e-13
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 72 1e-13
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 72 1e-13
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 72 1e-13
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 71 2e-13
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 67 4e-12
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 67 4e-12
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 63 6e-11
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 63 6e-11
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 51 3e-07
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 48 2e-06
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 48 2e-06
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 39 0.001
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 39 0.001
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 37 0.006
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 37 0.006
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 36 0.010
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 35 0.018
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 35 0.023
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 35 0.023
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 35 0.023
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 34 0.031
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 33 0.054
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 33 0.054
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 33 0.054
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 33 0.054
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 33 0.054
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 33 0.054
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 33 0.054
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 33 0.054
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 33 0.054
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 33 0.054
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 33 0.071
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 33 0.071
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 33 0.094
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 33 0.094
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 33 0.094
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 33 0.094
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 32 0.12
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 32 0.12
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 32 0.12
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 32 0.12
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 32 0.12
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 32 0.12
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 32 0.12
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 32 0.12
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 32 0.12
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 32 0.17
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 31 0.29
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 31 0.29
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 31 0.38
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 31 0.38
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 31 0.38
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 31 0.38
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 31 0.38
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 30 0.50
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 30 0.50
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 30 0.50
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 30 0.67
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 30 0.67
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 30 0.67
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 30 0.67
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 29 0.88
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 29 0.88
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 29 1.2
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 29 1.2
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 29 1.5
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 28 2.0
U40411-5|AAV28365.2| 221|Caenorhabditis elegans Hypothetical pr... 28 2.0
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 27 4.7
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 27 6.2
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 27 6.2
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 27 6.2
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 27 6.2
AF098997-9|AAC68720.1| 325|Caenorhabditis elegans Serpentine re... 27 6.2
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 26 8.2
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 78.6 bits (185), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +2
Query: 218 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 35
Score = 49.6 bits (113), Expect = 8e-07
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1
Query: 328 FDNYAVTVMIGGEPYTLGLFD 390
FDNYAVTVMIGGEPYTLGLFD
Sbjct: 37 FDNYAVTVMIGGEPYTLGLFD 57
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 78.6 bits (185), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +2
Query: 218 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 35
Score = 48.0 bits (109), Expect = 2e-06
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1
Query: 328 FDNYAVTVMIGGEPYTLGLFD 390
FDNYAVT MIGGEPYTLGLFD
Sbjct: 37 FDNYAVTAMIGGEPYTLGLFD 57
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 72.1 bits (169), Expect = 1e-13
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +2
Query: 218 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PT
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPT 35
Score = 32.3 bits (70), Expect = 0.12
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 328 FDNYAVTVMIGGEPYTLGLFD 390
FDNY+ VM+ G P LGL+D
Sbjct: 37 FDNYSANVMVDGRPINLGLWD 57
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 72.1 bits (169), Expect = 1e-13
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +2
Query: 218 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PT
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPT 35
Score = 32.3 bits (70), Expect = 0.12
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 328 FDNYAVTVMIGGEPYTLGLFD 390
FDNY+ VM+ G P LGL+D
Sbjct: 37 FDNYSANVMVDGRPINLGLWD 57
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 72.1 bits (169), Expect = 1e-13
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +2
Query: 218 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PT
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPT 35
Score = 32.3 bits (70), Expect = 0.12
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 328 FDNYAVTVMIGGEPYTLGLFD 390
FDNY+ VM+ G P LGL+D
Sbjct: 37 FDNYSANVMVDGRPINLGLWD 57
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 72.1 bits (169), Expect = 1e-13
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +2
Query: 218 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PT
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPT 35
Score = 32.3 bits (70), Expect = 0.12
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 328 FDNYAVTVMIGGEPYTLGLFD 390
FDNY+ VM+ G P LGL+D
Sbjct: 37 FDNYSANVMVDGRPINLGLWD 57
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 72.1 bits (169), Expect = 1e-13
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +2
Query: 218 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PT
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPT 35
Score = 32.3 bits (70), Expect = 0.12
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 328 FDNYAVTVMIGGEPYTLGLFD 390
FDNY+ VM+ G P LGL+D
Sbjct: 37 FDNYSANVMVDGRPINLGLWD 57
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 72.1 bits (169), Expect = 1e-13
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +2
Query: 218 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PT
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPT 35
Score = 32.3 bits (70), Expect = 0.12
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 328 FDNYAVTVMIGGEPYTLGLFD 390
FDNY+ VM+ G P LGL+D
Sbjct: 37 FDNYSANVMVDGRPINLGLWD 57
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 71.3 bits (167), Expect = 2e-13
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
+KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT
Sbjct: 1 MKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 32
Score = 49.6 bits (113), Expect = 8e-07
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1
Query: 328 FDNYAVTVMIGGEPYTLGLFD 390
FDNYAVTVMIGGEPYTLGLFD
Sbjct: 34 FDNYAVTVMIGGEPYTLGLFD 54
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 67.3 bits (157), Expect = 4e-12
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 218 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
MQ IKCVVVGDGAVGKTCLL+SYTTN FP EY+ T
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLLSYTTNAFPGEYILT 35
Score = 27.5 bits (58), Expect = 3.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 328 FDNYAVTVMIGGEPYTLGLFD 390
FD Y+ VM+ G P L L+D
Sbjct: 37 FDTYSTNVMVDGRPINLSLWD 57
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 67.3 bits (157), Expect = 4e-12
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2
Query: 218 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
MQ IKCVVVGDGAVGKTCLL+SYTTN FP EY+ T
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLLSYTTNAFPGEYILT 35
Score = 27.5 bits (58), Expect = 3.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 328 FDNYAVTVMIGGEPYTLGLFD 390
FD Y+ VM+ G P L L+D
Sbjct: 37 FDTYSTNVMVDGRPINLSLWD 57
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 63.3 bits (147), Expect = 6e-11
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = +2
Query: 212 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
S + IKCVVVGDG VGKTC+LISYTT+ FP +YVPT
Sbjct: 3 SPSRQIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPT 39
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 63.3 bits (147), Expect = 6e-11
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = +2
Query: 212 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
S + IKCVVVGDG VGKTC+LISYTT+ FP +YVPT
Sbjct: 3 SPSRQIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPT 39
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 51.2 bits (117), Expect = 3e-07
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTS 325
+KC+ VG+ AVGKT +++SYTTN +P YVPT+
Sbjct: 10 LKCIFVGNAAVGKTSMIVSYTTNVYPHNYVPTA 42
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 48.4 bits (110), Expect = 2e-06
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K V+VGDGA GKTCLLI ++ ++FP YVPT
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPT 37
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 48.4 bits (110), Expect = 2e-06
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K V+VGDGA GKTCLLI ++ ++FP YVPT
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPT 37
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 38.7 bits (86), Expect = 0.001
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = +2
Query: 218 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
M K VVVGDG VGK+ L I N F EY PT
Sbjct: 1 MTEYKLVVVGDGGVGKSALTIQLIQNHFVEEYDPT 35
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 38.7 bits (86), Expect = 0.001
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = +2
Query: 218 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
M K VVVGDG VGK+ L I N F EY PT
Sbjct: 4 MTEYKLVVVGDGGVGKSALTIQLIQNHFVEEYDPT 38
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 36.7 bits (81), Expect = 0.006
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 212 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
SK+ K VV+GDG VGK+ L I + +F Y PT
Sbjct: 13 SKLPYYKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPT 49
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 36.7 bits (81), Expect = 0.006
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 212 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
SK+ K VV+GDG VGK+ L I + +F Y PT
Sbjct: 13 SKLPYYKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPT 49
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 35.9 bits (79), Expect = 0.010
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
+K VVVGD GKT LL++YT +F Y T
Sbjct: 5 LKLVVVGDTYTGKTSLLVAYTKKQFLDNYTTT 36
Score = 27.1 bits (57), Expect = 4.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 328 FDNYAVTVMIGGEPYTLGLFD 390
FDN+AV+V I + Y + LFD
Sbjct: 38 FDNWAVSVHIDNKNYAVNLFD 58
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 35.1 bits (77), Expect = 0.018
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 221 QTIKCVVVGDGAVGKTCLLISYTTNKFP 304
+T K ++VG+ AVGKTCL + +FP
Sbjct: 99 RTFKVIIVGNAAVGKTCLSFRFCCGRFP 126
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 34.7 bits (76), Expect = 0.023
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 224 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
T K V+VGDG GKT + + T +F +YV T
Sbjct: 9 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVAT 41
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 34.7 bits (76), Expect = 0.023
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 218 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
M+ K VV+G G VGK+ L + + ++ F +Y PT
Sbjct: 1 MREFKVVVLGSGGVGKSALTVQFVSSTFIEKYDPT 35
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 34.7 bits (76), Expect = 0.023
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTSA 328
K ++VG G VGK+ L + + ++F EY PT A
Sbjct: 19 KVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKA 51
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 34.3 bits (75), Expect = 0.031
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 215 KMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +K +++GD VGKT L+ Y +F ++Y T
Sbjct: 6 KKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKAT 41
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 33.5 bits (73), Expect = 0.054
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++GD VGKTC+L ++ + F + ++ T
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFIST 40
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 33.5 bits (73), Expect = 0.054
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++GD VGK+CLL+ + + + Y+ T
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYIST 43
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 33.5 bits (73), Expect = 0.054
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++GD VGK+ LL+ + N F Y+ T
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADNTFSENYITT 42
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 33.5 bits (73), Expect = 0.054
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K VVVGD GK+C+L+ + N F +++ T
Sbjct: 8 KIVVVGDHNCGKSCILLRFAENSFRMDHIST 38
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 33.5 bits (73), Expect = 0.054
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++GD VGK+ LL+ + N F Y+ T
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADNTFSENYITT 42
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.054
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
IK + +GD VGKT L YT N F +++ T
Sbjct: 8 IKFLALGDSGVGKTSFLHRYTDNTFTGQFIST 39
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 33.5 bits (73), Expect = 0.054
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++GD VGKTC+L ++ + F + ++ T
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFIST 40
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 33.5 bits (73), Expect = 0.054
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++GD VGK+CLL+ + + + Y+ T
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYIST 43
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.054
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
IK + +GD VGKT L YT N F +++ T
Sbjct: 8 IKFLALGDSGVGKTSFLHRYTDNTFTGQFIST 39
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 33.5 bits (73), Expect = 0.054
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++GD VGKTC+L ++ + F + ++ T
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFIST 40
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 33.1 bits (72), Expect = 0.071
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K +++GD VGK+CLL+ +T +F
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRF 31
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 33.1 bits (72), Expect = 0.071
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 218 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
++T+K VVVG+ GKT LL + N F ++ + T
Sbjct: 4 IKTVKVVVVGESGAGKTALLTCFLDNTFETDPLTT 38
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 32.7 bits (71), Expect = 0.094
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 218 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
M+ K VV+G G VGK+ L + + F +Y PT
Sbjct: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPT 35
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 32.7 bits (71), Expect = 0.094
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++GD VGKTC+L ++ + F + ++ T
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFIST 41
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 32.7 bits (71), Expect = 0.094
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++GD VGKTC+L ++ + F + ++ T
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFIST 41
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 32.7 bits (71), Expect = 0.094
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K +++GD VGK+CLL+ +T +F
Sbjct: 8 KHIIIGDTGVGKSCLLLQFTDKRF 31
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 32.3 bits (70), Expect = 0.12
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSE 310
K +++GD VGK+CLL +T KF ++
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMAD 39
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 32.3 bits (70), Expect = 0.12
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K V++G+G VGK+ L++ + NKF +++ T
Sbjct: 14 KIVLLGEGCVGKSSLVLRFVENKFSCKHLST 44
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 32.3 bits (70), Expect = 0.12
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSE 310
K +++GD VGK+CLL +T KF ++
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMAD 39
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 32.3 bits (70), Expect = 0.12
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
++ VVVG G VGK+ L I + F +Y PT
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPT 49
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 32.3 bits (70), Expect = 0.12
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
++ VVVG G VGK+ L I + F +Y PT
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPT 49
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 32.3 bits (70), Expect = 0.12
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
++ VVVG G VGK+ L I + F +Y PT
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPT 49
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 32.3 bits (70), Expect = 0.12
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
++ VVVG G VGK+ L I + F +Y PT
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPT 49
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 32.3 bits (70), Expect = 0.12
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 221 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTSAL 331
+ IK VVVGDGA GKT + + F Y T L
Sbjct: 34 KVIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGL 70
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 32.3 bits (70), Expect = 0.12
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K V VGD AVGKTC L + N+F
Sbjct: 204 KVVFVGDSAVGKTCFLHRFCHNRF 227
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 31.9 bits (69), Expect = 0.17
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTSALIIML 343
K V+VG+ VGKTCL+ +T FP T + M+
Sbjct: 9 KVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMI 46
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 31.1 bits (67), Expect = 0.29
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKF 301
+K +++GD GKTCLLI Y F
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAF 27
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 31.1 bits (67), Expect = 0.29
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKF 301
+K +++GD GKTCLLI Y F
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAF 27
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 30.7 bits (66), Expect = 0.38
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++G+ +VGKT L Y + F S +V T
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVST 54
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 30.7 bits (66), Expect = 0.38
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++G+ +VGKT L Y + F S +V T
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVST 54
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 30.7 bits (66), Expect = 0.38
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++G+ +VGKT L Y + F S +V T
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVST 54
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 30.7 bits (66), Expect = 0.38
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++G+ +VGKT L Y + F S +V T
Sbjct: 38 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVST 68
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 30.7 bits (66), Expect = 0.38
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +++G+ +VGKT L Y + F S +V T
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVST 54
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 30.3 bits (65), Expect = 0.50
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K V++GDG VGK+ LL+ +T F + T
Sbjct: 8 KYVIIGDGGVGKSNLLLRFTDELFDPIHTTT 38
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 30.3 bits (65), Expect = 0.50
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 215 KMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYV 316
K +K +++GD VGKT L+ Y ++YV
Sbjct: 6 KKALLKVIILGDSGVGKTSLMNQYEIGDLMNQYV 39
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 30.3 bits (65), Expect = 0.50
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 212 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
S + T+K +++G+ VGK+ L++ + + F E T
Sbjct: 7 SPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAAT 43
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 29.9 bits (64), Expect = 0.67
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 218 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
M+ K VV+G+G VGK+ L + Y F Y T
Sbjct: 1 MKEYKIVVLGNGGVGKSALTLQYVQGIFVHTYDAT 35
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 29.9 bits (64), Expect = 0.67
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 227 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTSAL 331
+K V+ GD VGKTCL F EYV T +
Sbjct: 44 LKIVIRGDRNVGKTCLWKRLQGLSFQEEYVATEEI 78
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 29.9 bits (64), Expect = 0.67
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +V+GD VGKT ++ + N F S Y T
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTT 43
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 29.9 bits (64), Expect = 0.67
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K +V+GD VGKT ++ + N F S Y T
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTT 43
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 29.5 bits (63), Expect = 0.88
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSE 310
K V++GD VGK+ LL +T N+F E
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFHLE 39
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 29.5 bits (63), Expect = 0.88
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSE 310
K V++GD VGK+ LL +T N+F E
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLE 39
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K V+G VGK+ L++ +T N FP Y T
Sbjct: 15 KVAVMGYPHVGKSALVLRFTQNIFPERYEST 45
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
+ VV+G VGKT ++ Y N+F S+Y T
Sbjct: 19 RLVVLGSAKVGKTNIIRRYLYNEFSSKYKET 49
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTSALIIML 343
K V+V + VGKTCL+ +T FP T + M+
Sbjct: 9 KVVLVPNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMI 46
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
K V++G+ VGK+ LL +T N+F + PT
Sbjct: 10 KIVLIGNPGVGKSNLLSRFTRNEFNLKSKPT 40
>U40411-5|AAV28365.2| 221|Caenorhabditis elegans Hypothetical
protein B0403.6 protein.
Length = 221
Score = 28.3 bits (60), Expect = 2.0
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 21 ELSMINSKVQFII*FYSQ--VYIVYIYNIFRGLSLPRLLWSAKGLCQTARKLHLNIWY 188
+L + N +++ F SQ +Y Y Y F G+SL L+ +C+T + N++Y
Sbjct: 40 DLLVCNRIAEYLGNFQSQTAIYAAYGYFFFTGISLFVYLFEMIDVCKTLKYDEENVFY 97
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 27.1 bits (57), Expect = 4.7
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 134 VSKRVVSNSKKITSKYLVYDKKNYY*SKMQTIKCVVVGDG--AVGKTCLLISYTTNKFPS 307
VSK++ + KI K D K + +K + G G GKT LL++ +KF
Sbjct: 663 VSKKIEGSGNKINKKSKKSDDKKISKANNNFLKVLKSGSGKSGCGKTNLLMNLLLDKFQG 722
Query: 308 E 310
+
Sbjct: 723 D 723
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
+ +V+GD VGK+ LL +T K PT
Sbjct: 19 RLIVIGDSTVGKSSLLRYFTEGKMAEISDPT 49
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTSALI 334
K VV+GD VGKT ++ + ++ + Y P +A I
Sbjct: 54 KVVVLGDSGVGKTSIIYRH---RYGAHYRPVNATI 85
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K V+VGD VGKTC++ + F
Sbjct: 12 KIVLVGDMGVGKTCVVQRFRNGTF 35
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTSALI 334
K VV+GD VGKT ++ + ++ + Y P +A I
Sbjct: 54 KVVVLGDSGVGKTSIIYRH---RYGAHYRPVNATI 85
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 230 KCVVVGDGAVGKTCLLISYTTNKF 301
K V+VGD VGKTC++ + F
Sbjct: 12 KIVLVGDMGVGKTCVVQRFRNGTF 35
>AF098997-9|AAC68720.1| 325|Caenorhabditis elegans Serpentine
receptor, class i protein42 protein.
Length = 325
Score = 26.6 bits (56), Expect = 6.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 67 IPKFILFIFTIYLEACPCRGC 129
IP F+L+ F ++ ACP C
Sbjct: 124 IPNFLLYSFIAFVLACPVAAC 144
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 212 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 322
S K V++GD VGK+ LL+ + F S + T
Sbjct: 2 SSDHVFKYVIIGDRGVGKSNLLLRFIGKPFDSIHPST 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,782,139
Number of Sequences: 27780
Number of extensions: 162416
Number of successful extensions: 437
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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