Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_A24
         (390 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    24   0.54 
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   2.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   8.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   8.7  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          20   8.7  

>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 24.2 bits (50), Expect = 0.54
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 211 VEDADN*VCCGRRWCG 258
           V+DAD   CCG RW G
Sbjct: 82  VQDAD--FCCGMRWPG 95


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 199 ELLLVEDADN*VCCG 243
           ++++VED D+  CCG
Sbjct: 189 KVVVVEDVDSVECCG 203


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 151 HNPFADHSNLGRDRPL 104
           H PF  H  +  D+P+
Sbjct: 497 HKPFNFHITINADKPM 512


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 151 HNPFADHSNLGRDRPL 104
           H PF  H  +  D+P+
Sbjct: 497 HKPFNFHITINADKPM 512


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = +3

Query: 99  IFRGLSLPRLLWSAK 143
           +  G +LP+++W  K
Sbjct: 283 LMNGTTLPQIMWGTK 297


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,364
Number of Sequences: 438
Number of extensions: 2249
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)