Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_A21
         (138 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L38941-1|AAC41916.1|  117|Homo sapiens ribosomal protein L34 pro...    61   5e-10
CR542242-1|CAG47038.1|  117|Homo sapiens RPL34 protein.                61   5e-10
CR542232-1|CAG47028.1|  117|Homo sapiens RPL34 protein.                61   5e-10
BC106009-1|AAI06010.1|  117|Homo sapiens ribosomal protein L34 p...    61   5e-10
BC070208-1|AAH70208.1|  117|Homo sapiens ribosomal protein L34 p...    61   5e-10
BC001773-1|AAH01773.1|  117|Homo sapiens ribosomal protein L34 p...    61   5e-10
AB061832-1|BAB79470.1|  117|Homo sapiens ribosomal protein L34 p...    61   5e-10
AB007181-1|BAA25840.1|   45|Homo sapiens ribosomal protein L34 p...    56   3e-08

>L38941-1|AAC41916.1|  117|Homo sapiens ribosomal protein L34
           protein.
          Length = 117

 Score = 61.3 bits (142), Expect = 5e-10
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +2

Query: 23  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKK 133
           MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK
Sbjct: 1   MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKK 37


>CR542242-1|CAG47038.1|  117|Homo sapiens RPL34 protein.
          Length = 117

 Score = 61.3 bits (142), Expect = 5e-10
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +2

Query: 23  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKK 133
           MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK
Sbjct: 1   MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKK 37


>CR542232-1|CAG47028.1|  117|Homo sapiens RPL34 protein.
          Length = 117

 Score = 61.3 bits (142), Expect = 5e-10
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +2

Query: 23  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKK 133
           MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK
Sbjct: 1   MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKK 37


>BC106009-1|AAI06010.1|  117|Homo sapiens ribosomal protein L34
           protein.
          Length = 117

 Score = 61.3 bits (142), Expect = 5e-10
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +2

Query: 23  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKK 133
           MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK
Sbjct: 1   MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKK 37


>BC070208-1|AAH70208.1|  117|Homo sapiens ribosomal protein L34
           protein.
          Length = 117

 Score = 61.3 bits (142), Expect = 5e-10
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +2

Query: 23  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKK 133
           MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK
Sbjct: 1   MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKK 37


>BC001773-1|AAH01773.1|  117|Homo sapiens ribosomal protein L34
           protein.
          Length = 117

 Score = 61.3 bits (142), Expect = 5e-10
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +2

Query: 23  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKK 133
           MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK
Sbjct: 1   MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKK 37


>AB061832-1|BAB79470.1|  117|Homo sapiens ribosomal protein L34
           protein.
          Length = 117

 Score = 61.3 bits (142), Expect = 5e-10
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +2

Query: 23  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKK 133
           MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK
Sbjct: 1   MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKK 37


>AB007181-1|BAA25840.1|   45|Homo sapiens ribosomal protein L34
           protein.
          Length = 45

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +2

Query: 32  RLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKK 133
           RLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK
Sbjct: 1   RLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKK 34


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,441,396
Number of Sequences: 237096
Number of extensions: 246373
Number of successful extensions: 724
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 76,859,062
effective HSP length: 26
effective length of database: 70,694,566
effective search space used: 1343196754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)