Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_A18
(470 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80453-3|AAV58885.1| 434|Caenorhabditis elegans Serine palmitoy... 123 6e-29
U80453-2|AAK31446.1| 458|Caenorhabditis elegans Serine palmitoy... 123 6e-29
Z81127-5|CAB03390.2| 512|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U50307-2|AAA92303.1| 558|Caenorhabditis elegans Serine palmitoy... 57 7e-09
U50307-1|AAK71365.1| 586|Caenorhabditis elegans Serine palmitoy... 57 7e-09
Z70311-1|CAA94376.2| 420|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z79755-3|CAB02108.1| 355|Caenorhabditis elegans Hypothetical pr... 28 3.9
AC024803-1|AAL05589.4| 433|Caenorhabditis elegans Hypothetical ... 28 3.9
Z67990-5|CAA91936.2| 638|Caenorhabditis elegans Hypothetical pr... 27 5.1
AB012617-1|BAA33488.1| 638|Caenorhabditis elegans FLR-1 protein. 27 5.1
Z19155-2|CAA79561.1| 1139|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 27 9.0
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 27 9.0
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 27 9.0
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 27 9.0
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 27 9.0
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 27 9.0
>U80453-3|AAV58885.1| 434|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 1, isoform b protein.
Length = 434
Score = 123 bits (297), Expect = 6e-29
Identities = 56/137 (40%), Positives = 93/137 (67%), Gaps = 4/137 (2%)
Frame = +1
Query: 7 GKHGRGITEYLDIPRHEIDLIVGSLEHSFASIGGFCAGSHFIVEHQRLSGLGYCFSASLP 186
GK GRG+TE+ ++P ++D+++ SLE++ AS GGFC G ++V HQRLSGLGYCFSASLP
Sbjct: 247 GKTGRGVTEHFNVPMEDVDMVMASLENALASTGGFCVGRSYVVGHQRLSGLGYCFSASLP 306
Query: 187 PMLTQAAISALDILEQKPTVIDELNTIS----KQLHNALSEQLKNFTFRGDEISPIKHIY 354
P+L AA A+ I++++P+ + ++ ++ K+L +ALS F+ +G SP+KHIY
Sbjct: 307 PLLATAASEAISIIDEEPSRVQKVTEMAINGQKKLQDALSG--SKFSLQGCPESPMKHIY 364
Query: 355 LKKDLTDRLKHSYLRNI 405
+ ++ +++ +
Sbjct: 365 YNGEDEEKQLDTFVETV 381
>U80453-2|AAK31446.1| 458|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 1, isoform a protein.
Length = 458
Score = 123 bits (297), Expect = 6e-29
Identities = 56/137 (40%), Positives = 93/137 (67%), Gaps = 4/137 (2%)
Frame = +1
Query: 7 GKHGRGITEYLDIPRHEIDLIVGSLEHSFASIGGFCAGSHFIVEHQRLSGLGYCFSASLP 186
GK GRG+TE+ ++P ++D+++ SLE++ AS GGFC G ++V HQRLSGLGYCFSASLP
Sbjct: 271 GKTGRGVTEHFNVPMEDVDMVMASLENALASTGGFCVGRSYVVGHQRLSGLGYCFSASLP 330
Query: 187 PMLTQAAISALDILEQKPTVIDELNTIS----KQLHNALSEQLKNFTFRGDEISPIKHIY 354
P+L AA A+ I++++P+ + ++ ++ K+L +ALS F+ +G SP+KHIY
Sbjct: 331 PLLATAASEAISIIDEEPSRVQKVTEMAINGQKKLQDALSG--SKFSLQGCPESPMKHIY 388
Query: 355 LKKDLTDRLKHSYLRNI 405
+ ++ +++ +
Sbjct: 389 YNGEDEEKQLDTFVETV 405
>Z81127-5|CAB03390.2| 512|Caenorhabditis elegans Hypothetical
protein T22G5.5 protein.
Length = 512
Score = 58.8 bits (136), Expect = 2e-09
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 ARGKHGRGITEYLDIPRHEIDLIVGSLEHSFASIGGFCAGSHFIVEHQRLSGLGYCFSAS 180
A G GRG+ EY +ID+++G+L SFAS GG+ GS +++H R G C+ +
Sbjct: 317 AVGPSGRGVAEYWGCNPRDIDIMMGTLTKSFASAGGYMGGSKKVIDHIRRYSAGTCYGVT 376
Query: 181 L-PPMLTQAAISAL 219
+ PP++ Q + L
Sbjct: 377 MSPPLIAQVERAVL 390
>U50307-2|AAA92303.1| 558|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 2, isoform a protein.
Length = 558
Score = 56.8 bits (131), Expect = 7e-09
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Frame = +1
Query: 1 ARGKHGRGITEYLDIPRHEIDLIVGSLEHSFASIGGFCAGSHFIVEHQR-LSGLGYCFSA 177
A GK G+G+ EY ++D+++G+ SF + GG+ AGS V+H R S GY +S+
Sbjct: 356 AMGKTGKGVVEYWGCDPKDVDILMGTFTKSFGAAGGYIAGSKRTVDHLRAASPTGY-YSS 414
Query: 178 SLPPMLTQAAISALDILEQKPTVIDELNTISKQLHNALSEQLK----NFTFRGDEISPI 342
+ P + Q +++ I+ K D I + N+ ++K F G SP+
Sbjct: 415 PMSPPIAQQIYTSMSIIMGKDGTKDGAQRIERLARNSHYFRMKLKQNGFIVYGSNDSPV 473
>U50307-1|AAK71365.1| 586|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 2, isoform b protein.
Length = 586
Score = 56.8 bits (131), Expect = 7e-09
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Frame = +1
Query: 1 ARGKHGRGITEYLDIPRHEIDLIVGSLEHSFASIGGFCAGSHFIVEHQR-LSGLGYCFSA 177
A GK G+G+ EY ++D+++G+ SF + GG+ AGS V+H R S GY +S+
Sbjct: 384 AMGKTGKGVVEYWGCDPKDVDILMGTFTKSFGAAGGYIAGSKRTVDHLRAASPTGY-YSS 442
Query: 178 SLPPMLTQAAISALDILEQKPTVIDELNTISKQLHNALSEQLK----NFTFRGDEISPI 342
+ P + Q +++ I+ K D I + N+ ++K F G SP+
Sbjct: 443 PMSPPIAQQIYTSMSIIMGKDGTKDGAQRIERLARNSHYFRMKLKQNGFIVYGSNDSPV 501
>Z70311-1|CAA94376.2| 420|Caenorhabditis elegans Hypothetical
protein T25B9.1 protein.
Length = 420
Score = 37.9 bits (84), Expect = 0.004
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Frame = +1
Query: 7 GKHGRGITEYLDIPRHEIDLIVGSLEHSFA-SIGGFCAGSHFIVEHQRLSGLGYCFSASL 183
GK GRG E + D+I +L + S+GG+ G +++ R Y FS SL
Sbjct: 242 GKTGRGTAEAVG---GRPDVINSTLGKALGGSMGGYTTGPKPLIDLLRQRSRPYLFSNSL 298
Query: 184 PPMLTQAAISALDILEQKPTVIDELNTISKQLHNALSEQLKNFTFRG-DEISPIKHIYL 357
P + ++I D+L + I L T H S FT G D PI + L
Sbjct: 299 APSIVGSSIKVFDLLMNDSSFIGSLQT--NVSHFRKSMAANGFTILGNDPTHPICPVLL 355
>Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical protein
D2085.4 protein.
Length = 1001
Score = 28.3 bits (60), Expect = 2.9
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +1
Query: 238 PTVIDELNTISKQLHNALSEQLKNFTFRGDEISPIKHIYLKKD-----LTDRLKHSYLRN 402
P + L + K + L E +F+ ++ ++++ LK + +T H Y+R
Sbjct: 780 PIIFKHLKALQKMNNRELDELQLDFSVVTSDMGLVRNVNLKPNGSKFRVTVENVHEYVRL 839
Query: 403 IANYCLEKGVAFAVSAYLRDV 465
NY L++ +A V A + +
Sbjct: 840 YVNYHLKQRIASMVDAVRKGI 860
>Z79755-3|CAB02108.1| 355|Caenorhabditis elegans Hypothetical
protein F43G9.4 protein.
Length = 355
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/62 (22%), Positives = 34/62 (54%)
Frame = +1
Query: 229 EQKPTVIDELNTISKQLHNALSEQLKNFTFRGDEISPIKHIYLKKDLTDRLKHSYLRNIA 408
+Q+P + +E + ++ + E L N ++ DE++ K+ +K +T +LK++ +
Sbjct: 174 QQQPPITEEQSKSMMKMIDDRFEVLINEIWKSDEVAQSKNQTMKDKMTIKLKNNQFLKES 233
Query: 409 NY 414
+Y
Sbjct: 234 DY 235
>AC024803-1|AAL05589.4| 433|Caenorhabditis elegans Hypothetical
protein Y51H7BM.1 protein.
Length = 433
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -1
Query: 158 RPESLWCSTMKWEPAQKPPILANECSRDPTIKSISCRGISKYSVIP 21
+P + C MKW+ +K I ++ S +K + +GIS ++P
Sbjct: 92 KPYNKGCIMMKWKSLEKNYIADDKISVSICVKILRIKGISNPPLLP 137
>Z67990-5|CAA91936.2| 638|Caenorhabditis elegans Hypothetical
protein F02D10.5 protein.
Length = 638
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = -1
Query: 344 FIGEISSPRNVKFLSCS--ESALCNCFEMVFNSSITVGFCSKMSKAD 210
F+ +S F+SCS L NC E V VG C ++S +
Sbjct: 159 FLKSVSKSCEETFISCSFGREKLHNCCEHVTTEMTEVGVCFRLSNVN 205
>AB012617-1|BAA33488.1| 638|Caenorhabditis elegans FLR-1 protein.
Length = 638
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = -1
Query: 344 FIGEISSPRNVKFLSCS--ESALCNCFEMVFNSSITVGFCSKMSKAD 210
F+ +S F+SCS L NC E V VG C ++S +
Sbjct: 159 FLKSVSKSCEETFISCSFGREKLHNCCEHVTTEMTEVGVCFRLSNVN 205
>Z19155-2|CAA79561.1| 1139|Caenorhabditis elegans Hypothetical protein
F54G8.3 protein.
Length = 1139
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 374 SVRSFFR*MCFIGEISSPRNVKFLSCSESALCNCFEMV 261
S +F+ G PR VK LSC ++ NCF ++
Sbjct: 968 STANFWNLFAIKGGDGRPREVKHLSCQDNT-ANCFTVI 1004
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 202 AAISALDILEQKPTVIDELNTISKQLHNALSEQLKNFTFRGDEISPI 342
A I A + E DELN ++ + L+++ K T DEI +
Sbjct: 2733 AGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKL 2779
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 202 AAISALDILEQKPTVIDELNTISKQLHNALSEQLKNFTFRGDEISPI 342
A I A + E DELN ++ + L+++ K T DEI +
Sbjct: 2733 AGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKL 2779
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 202 AAISALDILEQKPTVIDELNTISKQLHNALSEQLKNFTFRGDEISPI 342
A I A + E DELN ++ + L+++ K T DEI +
Sbjct: 2188 AGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKL 2234
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 202 AAISALDILEQKPTVIDELNTISKQLHNALSEQLKNFTFRGDEISPI 342
A I A + E DELN ++ + L+++ K T DEI +
Sbjct: 2733 AGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKL 2779
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 202 AAISALDILEQKPTVIDELNTISKQLHNALSEQLKNFTFRGDEISPI 342
A I A + E DELN ++ + L+++ K T DEI +
Sbjct: 2733 AGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKL 2779
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 202 AAISALDILEQKPTVIDELNTISKQLHNALSEQLKNFTFRGDEISPI 342
A I A + E DELN ++ + L+++ K T DEI +
Sbjct: 2188 AGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKL 2234
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 202 AAISALDILEQKPTVIDELNTISKQLHNALSEQLKNFTFRGDEISPI 342
A I A + E DELN ++ + L+++ K T DEI +
Sbjct: 2733 AGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKL 2779
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 202 AAISALDILEQKPTVIDELNTISKQLHNALSEQLKNFTFRGDEISPI 342
A I A + E DELN ++ + L+++ K T DEI +
Sbjct: 2733 AGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKL 2779
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 202 AAISALDILEQKPTVIDELNTISKQLHNALSEQLKNFTFRGDEISPI 342
A I A + E DELN ++ + L+++ K T DEI +
Sbjct: 2188 AGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKL 2234
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 202 AAISALDILEQKPTVIDELNTISKQLHNALSEQLKNFTFRGDEISPI 342
A I A + E DELN ++ + L+++ K T DEI +
Sbjct: 2733 AGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKL 2779
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 202 AAISALDILEQKPTVIDELNTISKQLHNALSEQLKNFTFRGDEISPI 342
A I A + E DELN ++ + L+++ K T DEI +
Sbjct: 2733 AGIVAQPVFEMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKL 2779
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,821,169
Number of Sequences: 27780
Number of extensions: 219281
Number of successful extensions: 642
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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