Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_A11
(501 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical pr... 66 1e-11
U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b ... 65 2e-11
AF039720-11|AAK68359.1| 260|Caenorhabditis elegans Hypothetical... 30 1.1
Z78198-12|CAJ85750.1| 205|Caenorhabditis elegans Hypothetical p... 29 2.5
Z83114-4|CAB05554.4| 739|Caenorhabditis elegans Hypothetical pr... 28 4.4
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 27 5.8
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 27 7.6
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 27 7.6
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 27 7.6
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 27 7.6
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 7.6
>Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical
protein F35G12.10 protein.
Length = 301
Score = 66.1 bits (154), Expect = 1e-11
Identities = 31/91 (34%), Positives = 50/91 (54%)
Frame = +1
Query: 136 RDEKNFPRPVRLTEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLTTYLFSKEIYVME 315
RD N+P P R P K RL +P+ WF F TG +GPY F GL +L +KE++V E
Sbjct: 88 RDLTNYPYPSRPMYPPKTRLLMMPDSWFTAFQKVTGTSGPYLFFGGLFAFLVNKELWVFE 147
Query: 316 HEYYTGLSLLVMVIFATKKFGPQLSAWLDKE 408
+ + + ++ + ++ G ++ A L K+
Sbjct: 148 EQGHMTVGWILFYLLVSRTAGYKIDAGLYKD 178
>U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b
homolog protein 2 protein.
Length = 305
Score = 65.3 bits (152), Expect = 2e-11
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Frame = +1
Query: 136 RDEKNFPRPVRLTEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLTTYLFSKEIYVME 315
RD N+P P R P K RL +P+ WF F TGV+GPY F GL +L +KE++V E
Sbjct: 90 RDLVNYPYPARPMYPPKSRLLMMPDSWFTPFQKVTGVSGPYLFFGGLFAFLVNKELWVFE 149
Query: 316 HEYYTGLSLLVMVIFATKKFGPQLSAWL----DKEVDAVESSWNEDRVQSVKDLESSIED 483
+ + + ++ + T+ G ++ L + V+ + ED ++V+ ++S +
Sbjct: 150 EQGHMTVGWILFYLLVTRTAGYKIDQGLYNGYQERVNFFKGLIQEDLKEAVEFKKTSAKQ 209
Query: 484 EKS 492
+S
Sbjct: 210 TES 212
>AF039720-11|AAK68359.1| 260|Caenorhabditis elegans Hypothetical
protein F33D11.12 protein.
Length = 260
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 121 LWWSFWQ*VLCTGTVWPQ 68
L+W WQ VLC G W Q
Sbjct: 144 LYWGVWQFVLCVGAEWQQ 161
>Z78198-12|CAJ85750.1| 205|Caenorhabditis elegans Hypothetical
protein F55C5.11 protein.
Length = 205
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 215 HSSGMNPSLTLPGSVSLTGLG 153
HSS NP L +P S++LTG G
Sbjct: 155 HSSNNNPKLHMPESLTLTGSG 175
>Z83114-4|CAB05554.4| 739|Caenorhabditis elegans Hypothetical
protein K09B11.10 protein.
Length = 739
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 499 TALTSRPRSRILDLSRTAHGPRSSLTLLHQ-LPCPTTRTAVAQTSWWRK 356
TA S P S L L+ + PR TL Q +PC + RT +W K
Sbjct: 296 TANQSHPNSSFLFLAVDSFSPRPYSTLTSQVIPC-SQRTTSLSLKYWMK 343
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 277 TTYLFSKEIYVMEHEYYTG 333
TT LF K+IY EYY G
Sbjct: 50 TTVLFKKDIYTSTTEYYNG 68
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 227 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 66
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 227 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 66
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 227 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 66
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 123 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 176
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 227 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 66
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 227 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 66
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 227 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 66
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 227 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 66
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 227 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 66
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 123 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 176
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 227 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 66
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 227 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 66
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 485 SSSIEDSRSFTDCTRSSFQLDSTASTSLSNHADSCGPNF-LVAKMTIT 345
SSS+ + S T + S+ Q +T + + +D P+F V K T T
Sbjct: 515 SSSVSSTASSTQSSTSTQQSSTTTKSETTTSSDGTNPDFYFVEKATTT 562
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 485 SSSIEDSRSFTDCTRSSFQLDSTASTSLSNHADSCGPNF-LVAKMTIT 345
SSS+ + S T + S+ Q +T + + +D P+F V K T T
Sbjct: 515 SSSVSSTASSTQSSTSTQQSSTTTKSETTTSSDGTNPDFYFVEKATTT 562
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,233,994
Number of Sequences: 27780
Number of extensions: 257796
Number of successful extensions: 836
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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