Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_A08
         (285 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              21   3.9  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    20   5.2  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    20   5.2  

>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 8   GLTPLTFIGLRYXFIVSIS 64
           G TPLTF+     F  ++S
Sbjct: 97  GSTPLTFVNDTVSFTTTVS 115


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 181 NTVLFVTCLLRELS 222
           NT++ VTCLL  L+
Sbjct: 2   NTLVTVTCLLAALT 15


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 181 NTVLFVTCLLRELS 222
           NT++ VTCLL  L+
Sbjct: 2   NTLVTVTCLLAALT 15


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,515
Number of Sequences: 438
Number of extensions: 1119
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5619645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)