Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_A07
         (422 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457401-1|CAG33682.1|  410|Homo sapiens CGI-57 protein.               56   5e-08
BC012821-1|AAH12821.1|  410|Homo sapiens chromosome 2 open readi...    56   5e-08
BC001393-1|AAH01393.1|  410|Homo sapiens chromosome 2 open readi...    56   5e-08
AY007160-1|AAG02008.1|  410|Homo sapiens protein ( Homo sapiens ...    56   5e-08
AF151815-1|AAD34052.1|  410|Homo sapiens CGI-57 protein protein.       56   5e-08
AF104334-1|AAF15545.1|  661|Homo sapiens putative organic anion ...    34   0.17 

>CR457401-1|CAG33682.1|  410|Homo sapiens CGI-57 protein.
          Length = 410

 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 25/59 (42%), Positives = 38/59 (64%)
 Frame = +2

Query: 68  ASGGIELKQLKKLEVEFLDAIDWNVFVSEKSFEDGLVWLERQVALRQAQLRGFFTYTDL 244
           A+GG+ +  L  LE  FL A+DW+++   +   + L WLE  VA +Q + RG++TYTDL
Sbjct: 150 AAGGVAVPTLNALERGFLSAMDWHLYTDPREIFEVLSWLESCVAEQQGRWRGWYTYTDL 208


>BC012821-1|AAH12821.1|  410|Homo sapiens chromosome 2 open reading
           frame 24 protein.
          Length = 410

 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 25/59 (42%), Positives = 38/59 (64%)
 Frame = +2

Query: 68  ASGGIELKQLKKLEVEFLDAIDWNVFVSEKSFEDGLVWLERQVALRQAQLRGFFTYTDL 244
           A+GG+ +  L  LE  FL A+DW+++   +   + L WLE  VA +Q + RG++TYTDL
Sbjct: 150 AAGGVAVPTLNALERGFLSAMDWHLYTDPREIFEVLSWLESCVAEQQGRWRGWYTYTDL 208


>BC001393-1|AAH01393.1|  410|Homo sapiens chromosome 2 open reading
           frame 24 protein.
          Length = 410

 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 25/59 (42%), Positives = 38/59 (64%)
 Frame = +2

Query: 68  ASGGIELKQLKKLEVEFLDAIDWNVFVSEKSFEDGLVWLERQVALRQAQLRGFFTYTDL 244
           A+GG+ +  L  LE  FL A+DW+++   +   + L WLE  VA +Q + RG++TYTDL
Sbjct: 150 AAGGVAVPTLNALERGFLSAMDWHLYTDPREIFEVLSWLESCVAEQQGRWRGWYTYTDL 208


>AY007160-1|AAG02008.1|  410|Homo sapiens protein ( Homo sapiens
           clone CDABP0125 mRNA sequence. ).
          Length = 410

 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 25/59 (42%), Positives = 38/59 (64%)
 Frame = +2

Query: 68  ASGGIELKQLKKLEVEFLDAIDWNVFVSEKSFEDGLVWLERQVALRQAQLRGFFTYTDL 244
           A+GG+ +  L  LE  FL A+DW+++   +   + L WLE  VA +Q + RG++TYTDL
Sbjct: 150 AAGGVAVPTLNALERGFLSAMDWHLYTDPREIFEVLSWLESCVAEQQGRWRGWYTYTDL 208


>AF151815-1|AAD34052.1|  410|Homo sapiens CGI-57 protein protein.
          Length = 410

 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 25/59 (42%), Positives = 38/59 (64%)
 Frame = +2

Query: 68  ASGGIELKQLKKLEVEFLDAIDWNVFVSEKSFEDGLVWLERQVALRQAQLRGFFTYTDL 244
           A+GG+ +  L  LE  FL A+DW+++   +   + L WLE  VA +Q + RG++TYTDL
Sbjct: 150 AAGGVAVPTLNALERGFLSAMDWHLYTDPREIFEVLSWLESCVAEQQGRWRGWYTYTDL 208


>AF104334-1|AAF15545.1|  661|Homo sapiens putative organic anion
           transporter protein.
          Length = 661

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -3

Query: 348 TMVIKVEI*PRVTVTHAKDTAFSTSAKSPES--HVAVRSVYVKKPRSCACRNAT 193
           T+ + + I P V   H ++  F+ S K+P S  H+    +Y+ +  SC   N+T
Sbjct: 584 TVAVSLRIFPLVLAMHCREMHFNLSEKAPPSGFHIRCNFLYIPQQHSCTNGNST 637


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,544,219
Number of Sequences: 237096
Number of extensions: 1239959
Number of successful extensions: 3215
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3215
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)