Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_A04
(256 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 91 4e-19
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 91 4e-19
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 91 4e-19
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 91 4e-19
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 91 4e-19
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 91 4e-19
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 91 4e-19
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 91 4e-19
CR457252-1|CAG33533.1| 430|Homo sapiens FLJ10276 protein. 27 8.3
BC028381-1|AAH28381.1| 430|Homo sapiens BSDC1 protein protein. 27 8.3
AL109945-6|CAI22890.1| 474|Homo sapiens BSD domain containing 1... 27 8.3
AL109945-5|CAI22889.1| 430|Homo sapiens BSD domain containing 1... 27 8.3
AK001138-1|BAA91517.1| 430|Homo sapiens protein ( Homo sapiens ... 27 8.3
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = +3
Query: 60 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELHGKNVEELIEAGRG 239
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISEL+GKN+E++I G G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 240 KLS 248
KL+
Sbjct: 61 KLA 63
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = +3
Query: 60 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELHGKNVEELIEAGRG 239
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISEL+GKN+E++I G G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 240 KLS 248
KL+
Sbjct: 61 KLA 63
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = +3
Query: 60 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELHGKNVEELIEAGRG 239
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISEL+GKN+E++I G G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 240 KLS 248
KL+
Sbjct: 61 KLA 63
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = +3
Query: 60 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELHGKNVEELIEAGRG 239
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISEL+GKN+E++I G G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 240 KLS 248
KL+
Sbjct: 61 KLA 63
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = +3
Query: 60 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELHGKNVEELIEAGRG 239
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISEL+GKN+E++I G G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 240 KLS 248
KL+
Sbjct: 61 KLA 63
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = +3
Query: 60 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELHGKNVEELIEAGRG 239
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISEL+GKN+E++I G G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 240 KLS 248
KL+
Sbjct: 61 KLA 63
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = +3
Query: 60 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELHGKNVEELIEAGRG 239
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISEL+GKN+E++I G G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 240 KLS 248
KL+
Sbjct: 61 KLA 63
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = +3
Query: 60 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELHGKNVEELIEAGRG 239
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISEL+GKN+E++I G G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 240 KLS 248
KL+
Sbjct: 61 KLA 63
>CR457252-1|CAG33533.1| 430|Homo sapiens FLJ10276 protein.
Length = 430
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 151 PTELRIFSTSAAAGDALPPNTASKYAAT 68
PT+LR+F ++ +G + P N K ++T
Sbjct: 362 PTDLRVFELNSDSGKSTPSNNGKKGSST 389
>BC028381-1|AAH28381.1| 430|Homo sapiens BSDC1 protein protein.
Length = 430
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 151 PTELRIFSTSAAAGDALPPNTASKYAAT 68
PT+LR+F ++ +G + P N K ++T
Sbjct: 362 PTDLRVFELNSDSGKSTPSNNGKKGSST 389
>AL109945-6|CAI22890.1| 474|Homo sapiens BSD domain containing 1
protein.
Length = 474
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 151 PTELRIFSTSAAAGDALPPNTASKYAAT 68
PT+LR+F ++ +G + P N K ++T
Sbjct: 379 PTDLRVFELNSDSGKSTPSNNGKKGSST 406
>AL109945-5|CAI22889.1| 430|Homo sapiens BSD domain containing 1
protein.
Length = 430
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 151 PTELRIFSTSAAAGDALPPNTASKYAAT 68
PT+LR+F ++ +G + P N K ++T
Sbjct: 362 PTDLRVFELNSDSGKSTPSNNGKKGSST 389
>AK001138-1|BAA91517.1| 430|Homo sapiens protein ( Homo sapiens
cDNA FLJ10276 fis, clone HEMBB1001182. ).
Length = 430
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 151 PTELRIFSTSAAAGDALPPNTASKYAAT 68
PT+LR+F ++ +G + P N K ++T
Sbjct: 362 PTDLRVFELNSDSGKSTPSNNGKKGSST 389
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,464,158
Number of Sequences: 237096
Number of extensions: 553880
Number of successful extensions: 1310
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1310
length of database: 76,859,062
effective HSP length: 62
effective length of database: 62,159,110
effective search space used: 1367500420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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