Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_A04
(256 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 76 4e-15
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 68 1e-12
AF003140-6|AAD47122.2| 1145|Caenorhabditis elegans Hypothetical ... 32 0.049
AF016688-3|AAB66076.2| 674|Caenorhabditis elegans Hypothetical ... 29 0.60
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 27 1.4
AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical ... 27 1.8
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 25 5.6
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 25 5.6
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 25 5.6
AF038615-2|AAB94145.1| 782|Caenorhabditis elegans Hypothetical ... 25 5.6
Z77655-8|CAB01138.3| 402|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 25 7.4
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 25 7.4
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 25 7.4
U00049-1|AAC47053.2| 288|Caenorhabditis elegans Serpentine rece... 25 7.4
AL033514-28|CAA22089.1| 340|Caenorhabditis elegans Hypothetical... 25 7.4
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 25 7.4
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 25 7.4
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 25 9.8
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z81104-5|CAE17892.1| 285|Caenorhabditis elegans Hypothetical pr... 25 9.8
AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopepti... 25 9.8
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 25 9.8
AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical ... 25 9.8
AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide ... 25 9.8
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 75.8 bits (178), Expect = 4e-15
Identities = 37/62 (59%), Positives = 46/62 (74%)
Frame = +3
Query: 60 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELHGKNVEELIEAGRG 239
MRYV+AYLLAVLGG A+P D++ ILS+VG++AD+E K V+S L GK VEELI G
Sbjct: 1 MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60
Query: 240 KL 245
L
Sbjct: 61 GL 62
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 67.7 bits (158), Expect = 1e-12
Identities = 31/63 (49%), Positives = 42/63 (66%)
Frame = +3
Query: 60 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELHGKNVEELIEAGRG 239
M+Y+ AYLLA LGG ASP+A DV K+L + G++ D E V+ L GK + E+I G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 240 KLS 248
KLS
Sbjct: 61 KLS 63
>AF003140-6|AAD47122.2| 1145|Caenorhabditis elegans Hypothetical
protein C44E4.7 protein.
Length = 1145
Score = 32.3 bits (70), Expect = 0.049
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +3
Query: 78 YLLAVLGGKAS---PAAADVEKILSSVGIEADSEKLKKVISELHGKNVEELIEAGRGKLS 248
+LL V G+ S A D EKILS + D+EK +V+ ++ + ++ RGKLS
Sbjct: 411 WLLGVCSGQMSYKKEVAVDAEKILSR--LYPDAEKRNEVLYHFGVSSILKGLDRPRGKLS 468
Query: 249 FH 254
H
Sbjct: 469 LH 470
>AF016688-3|AAB66076.2| 674|Caenorhabditis elegans Hypothetical
protein F18A12.4 protein.
Length = 674
Score = 28.7 bits (61), Expect = 0.60
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 27 QYTFRVLAT*KMRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELHGK 206
Q FR+L K +A L +++ S + + +IL + G++ DSE++ K E
Sbjct: 186 QLDFRILTEGKFVRIAPTLGSIVHN--STMISMISEILEANGVQPDSEEISKEFEEYSSL 243
Query: 207 NVEELIEAGRGKLS 248
++ GKLS
Sbjct: 244 QMKLAKYQSSGKLS 257
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 60 MRYVAAYLLAVLGGKASPAAAD-VEKILSSVGIEADSEKLKKVISELHGKNVEELIEAGR 236
++Y ++ L LG + + +E +S++GI+ D ++ KV+S G ++ L +
Sbjct: 172 LQYNSSVDLKYLGQNVTVTPEEPIESKMSAMGIDDDKKRNSKVVSTAVGYKIQILNASAE 231
Query: 237 GKLS 248
G S
Sbjct: 232 GSTS 235
>AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical
protein Y25C1A.5 protein.
Length = 971
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +3
Query: 123 DVEKILSSVGIEADSEKLKKVISELHGKNVEELI 224
D+ ++LSS G+E + L + + +NVE+++
Sbjct: 325 DILRVLSSPGLEVRKKTLSLALDLVSSRNVEDMV 358
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 25.4 bits (53), Expect = 5.6
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +3
Query: 102 KASPAAADVEKILSSVGIEADS----EKLKKVISELHGKNVEE 218
KA A ++EKI V DS EKL+K + E K VEE
Sbjct: 850 KAGKEAEELEKINDKVKALEDSLAKEEKLRKELEESSAKLVEE 892
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 25.4 bits (53), Expect = 5.6
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +3
Query: 102 KASPAAADVEKILSSVGIEADS----EKLKKVISELHGKNVEE 218
KA A ++EKI V DS EKL+K + E K VEE
Sbjct: 850 KAGKEAEELEKINDKVKALEDSLAKEEKLRKELEESSAKLVEE 892
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 25.4 bits (53), Expect = 5.6
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +3
Query: 102 KASPAAADVEKILSSVGIEADS----EKLKKVISELHGKNVEE 218
KA A ++EKI V DS EKL+K + E K VEE
Sbjct: 853 KAGKEAEELEKINDKVKALEDSLAKEEKLRKELEESSAKLVEE 895
>AF038615-2|AAB94145.1| 782|Caenorhabditis elegans Hypothetical
protein R02D3.4 protein.
Length = 782
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 111 PAAADVEKILSSVGIEADSEKLKKVISELHGKNVEELIEAGRGKL 245
P+A + + + DSEK ++ +H K V L+ A RG++
Sbjct: 368 PSACLTQFVRDGRCVMLDSEKTTELGMNMHEKLVSHLLIANRGRI 412
>Z77655-8|CAB01138.3| 402|Caenorhabditis elegans Hypothetical
protein C56A3.8a protein.
Length = 402
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +3
Query: 138 LSSVGIEADSEKLKKVISEL-HGKNVEE 218
LS VGI++D+E + ++S L H K V++
Sbjct: 7 LSHVGIDSDNESVYDLMSSLEHRKKVDD 34
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 153 IEADSEKLKKVISELHGKNVEELIEA 230
I D LKK I+ L K V+ELI A
Sbjct: 1023 ITEDFNMLKKTIATLDKKKVDELIRA 1048
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 153 IEADSEKLKKVISELHGKNVEELIEA 230
I D LKK I+ L K V+ELI A
Sbjct: 1023 ITEDFNMLKKTIATLDKKKVDELIRA 1048
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 153 IEADSEKLKKVISELHGKNVEELIEA 230
I D LKK I+ L K V+ELI A
Sbjct: 1023 ITEDFNMLKKTIATLDKKKVDELIRA 1048
>U00049-1|AAC47053.2| 288|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 1 protein.
Length = 288
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +1
Query: 61 CVTWPRIYSPCWAAKRPQLLLMSKRSSALW 150
CV WP YS W +L S LW
Sbjct: 133 CVLWPLSYSLFWKKWLKSILTTMAISPCLW 162
>AL033514-28|CAA22089.1| 340|Caenorhabditis elegans Hypothetical
protein Y75B8A.29 protein.
Length = 340
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 117 AADVEKILSSVGIEADSEKLKKVISELHGKNVEELIEAGRGKLSFH 254
A D+ K++S +G+E + + EL+ K E + L+FH
Sbjct: 171 AVDLRKMMSEIGVERLKLEYENEKMELNKKFAEMFAQDETVNLNFH 216
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 153 IEADSEKLKKVISELHGKNVEELIEA 230
I D LKK I+ L K V+ELI A
Sbjct: 1023 ITEDFNMLKKTIATLDKKKVDELIRA 1048
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 250 KESLPRPASINSSTFLP 200
KESLP P I +ST +P
Sbjct: 436 KESLPTPIEITTSTVIP 452
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/32 (40%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Frame = +3
Query: 144 SVGIEADSEKLKKVISELHGK---NVEELIEA 230
SVG AD++K K I++++GK +V+EL+++
Sbjct: 297 SVGKWADAKKQLKKIAKMNGKSNVDVDELVDS 328
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/32 (40%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Frame = +3
Query: 144 SVGIEADSEKLKKVISELHGK---NVEELIEA 230
SVG AD++K K I++++GK +V+EL+++
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELVDS 311
>Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical
protein C09H6.3 protein.
Length = 593
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 129 EKILSSVGIEADSEKLKKVISE 194
EKIL + G + SE +K V+SE
Sbjct: 528 EKILLAAGYDPKSELMKMVVSE 549
>Z81104-5|CAE17892.1| 285|Caenorhabditis elegans Hypothetical
protein M199.7 protein.
Length = 285
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 159 ADSEKLKKVISELHGKNVEELIEA 230
A E+L++V+S+L VEE +EA
Sbjct: 192 ASKEELERVVSKLQTCRVEENVEA 215
>AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopeptide
symporter OPT-3 protein.
Length = 701
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 71 GRVFTRRVGRQSVPSCC*CRKDPQLCGD 154
GR++ +RVG +S+ S + D +L GD
Sbjct: 382 GRIYLQRVGNESLISDFRYKSDGRLIGD 409
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/32 (40%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Frame = +3
Query: 144 SVGIEADSEKLKKVISELHGK---NVEELIEA 230
SVG AD++K K I++++GK +V+EL+++
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELVDS 311
>AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical
protein F49F1.1 protein.
Length = 265
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 113 SCC*CRKDPQLCGD 154
SC C++DP +CGD
Sbjct: 44 SCGICKQDPGVCGD 57
>AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide
transporter protein 3 protein.
Length = 701
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 71 GRVFTRRVGRQSVPSCC*CRKDPQLCGD 154
GR++ +RVG +S+ S + D +L GD
Sbjct: 382 GRIYLQRVGNESLISDFRYKSDGRLIGD 409
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,329,488
Number of Sequences: 27780
Number of extensions: 82387
Number of successful extensions: 259
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 230791218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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