Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_A02
         (393 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC058843-1|AAH58843.1|  136|Homo sapiens ZBTB8OS protein protein.      82   7e-16
AY151085-1|AAN75224.1|  123|Homo sapiens archease isoform 5D pro...    82   7e-16
AY151084-1|AAN75223.1|  179|Homo sapiens archease protein.             82   7e-16
AL033529-2|CAI20021.1|  146|Homo sapiens zinc finger and BTB dom...    82   7e-16
AL033529-1|CAI20020.1|  179|Homo sapiens zinc finger and BTB dom...    82   7e-16
AY099494-1|AAM34478.1|  154|Homo sapiens archease-like protein p...    79   5e-15
AY099493-1|AAM34477.1|   62|Homo sapiens archease protein.             48   8e-06
U78181-1|AAB48981.1|  528|Homo sapiens sodium channel 2 protein.       29   7.2  
U78180-1|AAB48980.1|  574|Homo sapiens sodium channel 2 protein.       29   7.2  

>BC058843-1|AAH58843.1|  136|Homo sapiens ZBTB8OS protein protein.
          Length = 136

 Score = 81.8 bits (193), Expect = 7e-16
 Identities = 38/57 (66%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
 Frame = +1

Query: 112 PPIT--YEYLDHTADVQLHAWGDSLKETFEQCGMAMFGYMTELDYVQITEVHTVEAE 276
           PP+   YEYLDHTADVQLHAWGD+L+E FEQC MAMFGYMT+   V+   + TVE E
Sbjct: 25  PPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAMFGYMTDTGTVE--PLQTVEVE 79


>AY151085-1|AAN75224.1|  123|Homo sapiens archease isoform 5D
           protein.
          Length = 123

 Score = 81.8 bits (193), Expect = 7e-16
 Identities = 38/57 (66%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
 Frame = +1

Query: 112 PPIT--YEYLDHTADVQLHAWGDSLKETFEQCGMAMFGYMTELDYVQITEVHTVEAE 276
           PP+   YEYLDHTADVQLHAWGD+L+E FEQC MAMFGYMT+   V+   + TVE E
Sbjct: 37  PPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAMFGYMTDTGTVE--PLQTVEVE 91


>AY151084-1|AAN75223.1|  179|Homo sapiens archease protein.
          Length = 179

 Score = 81.8 bits (193), Expect = 7e-16
 Identities = 38/57 (66%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
 Frame = +1

Query: 112 PPIT--YEYLDHTADVQLHAWGDSLKETFEQCGMAMFGYMTELDYVQITEVHTVEAE 276
           PP+   YEYLDHTADVQLHAWGD+L+E FEQC MAMFGYMT+   V+   + TVE E
Sbjct: 37  PPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAMFGYMTDTGTVE--PLQTVEVE 91


>AL033529-2|CAI20021.1|  146|Homo sapiens zinc finger and BTB domain
           containing 8 opposite strand protein.
          Length = 146

 Score = 81.8 bits (193), Expect = 7e-16
 Identities = 38/57 (66%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
 Frame = +1

Query: 112 PPIT--YEYLDHTADVQLHAWGDSLKETFEQCGMAMFGYMTELDYVQITEVHTVEAE 276
           PP+   YEYLDHTADVQLHAWGD+L+E FEQC MAMFGYMT+   V+   + TVE E
Sbjct: 35  PPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAMFGYMTDTGTVE--PLQTVEVE 89


>AL033529-1|CAI20020.1|  179|Homo sapiens zinc finger and BTB domain
           containing 8 opposite strand protein.
          Length = 179

 Score = 81.8 bits (193), Expect = 7e-16
 Identities = 38/57 (66%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
 Frame = +1

Query: 112 PPIT--YEYLDHTADVQLHAWGDSLKETFEQCGMAMFGYMTELDYVQITEVHTVEAE 276
           PP+   YEYLDHTADVQLHAWGD+L+E FEQC MAMFGYMT+   V+   + TVE E
Sbjct: 37  PPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAMFGYMTDTGTVE--PLQTVEVE 91


>AY099494-1|AAM34478.1|  154|Homo sapiens archease-like protein
           protein.
          Length = 154

 Score = 79.0 bits (186), Expect = 5e-15
 Identities = 35/57 (61%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
 Frame = +1

Query: 112 PPIT--YEYLDHTADVQLHAWGDSLKETFEQCGMAMFGYMTELDYVQITEVHTVEAE 276
           PP+   YEYLDHTADVQLHAWGD+L+  FEQC MAMFGYMT+   V+  +   VE +
Sbjct: 12  PPVNRKYEYLDHTADVQLHAWGDTLEVAFEQCAMAMFGYMTDTGTVEPLQTAEVETQ 68


>AY099493-1|AAM34477.1|   62|Homo sapiens archease protein.
          Length = 62

 Score = 48.4 bits (110), Expect = 8e-06
 Identities = 20/26 (76%), Positives = 23/26 (88%), Gaps = 2/26 (7%)
 Frame = +1

Query: 112 PPIT--YEYLDHTADVQLHAWGDSLK 183
           PP+   YEYLDHTADVQLHAWGD+L+
Sbjct: 37  PPVNRKYEYLDHTADVQLHAWGDTLE 62


>U78181-1|AAB48981.1|  528|Homo sapiens sodium channel 2 protein.
          Length = 528

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 93  RRSLCSTTDYI*VFGSHG*CSITRMGRQFKGNV*TMRDG 209
           R  +CS  D+  VF  +G C     GR  +  + TM+DG
Sbjct: 175 RGEVCSAEDFKVVFTRYGKCYTFNSGRDGRPRLKTMKDG 213


>U78180-1|AAB48980.1|  574|Homo sapiens sodium channel 2 protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 93  RRSLCSTTDYI*VFGSHG*CSITRMGRQFKGNV*TMRDG 209
           R  +CS  D+  VF  +G C     GR  +  + TM+DG
Sbjct: 175 RGEVCSAEDFKVVFTRYGKCYTFNSGRDGRPRLKTMKDG 213


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,194,828
Number of Sequences: 237096
Number of extensions: 975822
Number of successful extensions: 5122
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5122
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)