Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_A01
         (390 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...   258   2e-71
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...   258   2e-71
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...   258   2e-71
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...   239   6e-66
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    25   0.31 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   1.6  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    22   2.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   5.0  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   6.6  

>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score =  258 bits (631), Expect = 2e-71
 Identities = 120/130 (92%), Positives = 125/130 (96%)
 Frame = +1

Query: 1   ARGDCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESR 180
           ++ DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE+R
Sbjct: 34  SQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETR 93

Query: 181 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPTTKMPWFKGWLVERKEGKAEGN 360
           FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE ++KMPWFKGW VERKEGK EG 
Sbjct: 94  FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGK 153

Query: 361 CLIEALDAIL 390
           CLIEALDAIL
Sbjct: 154 CLIEALDAIL 163


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score =  258 bits (631), Expect = 2e-71
 Identities = 120/130 (92%), Positives = 125/130 (96%)
 Frame = +1

Query: 1   ARGDCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESR 180
           ++ DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE+R
Sbjct: 50  SQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETR 109

Query: 181 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPTTKMPWFKGWLVERKEGKAEGN 360
           FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE ++KMPWFKGW VERKEGK EG 
Sbjct: 110 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGK 169

Query: 361 CLIEALDAIL 390
           CLIEALDAIL
Sbjct: 170 CLIEALDAIL 179


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score =  258 bits (631), Expect = 2e-71
 Identities = 120/130 (92%), Positives = 125/130 (96%)
 Frame = +1

Query: 1   ARGDCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESR 180
           ++ DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE+R
Sbjct: 107 SQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETR 166

Query: 181 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPTTKMPWFKGWLVERKEGKAEGN 360
           FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE ++KMPWFKGW VERKEGK EG 
Sbjct: 167 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGK 226

Query: 361 CLIEALDAIL 390
           CLIEALDAIL
Sbjct: 227 CLIEALDAIL 236


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score =  239 bits (586), Expect = 6e-66
 Identities = 111/130 (85%), Positives = 120/130 (92%)
 Frame = +1

Query: 1   ARGDCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESR 180
           ++ DCAVLIVAAG GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE+R
Sbjct: 107 SQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEAR 166

Query: 181 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPTTKMPWFKGWLVERKEGKAEGN 360
           FEEIKKEVSSYIKKIGYN A+VAFVPISGWHGDNMLEP+ K PW+KGW VERK+G A+G 
Sbjct: 167 FEEIKKEVSSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGK 226

Query: 361 CLIEALDAIL 390
            LIEALDAIL
Sbjct: 227 TLIEALDAIL 236


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 25.0 bits (52), Expect = 0.31
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 242 PSLSYPFLAGTEITC-WSRPPKCHGSRDGWLSVKKE 346
           P+L   F  G  + C  SRP +C G  DG++   KE
Sbjct: 160 PALEEQFATGRVLACISSRPGQC-GREDGYILEGKE 194


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 246 DGSRIVTNFLDVGRDFL 196
           DG R+V  F+DV +D +
Sbjct: 531 DGQRLVYQFVDVPKDII 547


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +1

Query: 166 YSESRFEEIKKEVSSYIKKIGYNPAAVAFVPI 261
           Y+ S +       ++Y KK+ YN   +  +P+
Sbjct: 89  YNYSNYNNYNNNYNNYNKKLYYNINYIEQIPV 120


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 166 YSESRFEEIKKEVS 207
           Y E R+EEI+++ S
Sbjct: 17  YGEDRWEEIRRQAS 30


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +2

Query: 188 KSRRKSLPTSRKLVTIRLPSLSYPFLAGTEITCW 289
           K + K+ PTS   V+    +++   + G  + CW
Sbjct: 252 KPQTKTKPTSPYHVSDHKAAITVGVIMGVFLICW 285


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.134    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,399
Number of Sequences: 438
Number of extensions: 2282
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)