Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_P24
(468 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 112 1e-25
Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z81527-16|CAB04280.1| 915|Caenorhabditis elegans Hypothetical p... 31 0.31
Z81527-15|CAB04279.1| 927|Caenorhabditis elegans Hypothetical p... 31 0.31
Z81110-8|CAB03263.1| 915|Caenorhabditis elegans Hypothetical pr... 31 0.31
Z81110-7|CAB03262.1| 927|Caenorhabditis elegans Hypothetical pr... 31 0.31
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 28 3.8
U50198-1|AAA91259.2| 529|Caenorhabditis elegans Hypothetical pr... 27 5.1
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 27 5.1
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 27 5.1
AF016421-10|AAC25792.1| 473|Caenorhabditis elegans Hypothetical... 27 6.7
Z81082-1|CAB03094.2| 291|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 27 8.9
U41530-1|AAA83273.3| 636|Caenorhabditis elegans Hypothetical pr... 27 8.9
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 27 8.9
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 27 8.9
AF098997-11|AAC68721.1| 250|Caenorhabditis elegans Hypothetical... 27 8.9
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
K03H1.5 protein.
Length = 1385
Score = 112 bits (269), Expect = 1e-25
Identities = 57/152 (37%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Frame = +2
Query: 11 SRSHDFGFTPYNEANKVPSLSHWFHDMIPFYQCCMWQEEQAVGCETFRFERRPSQDCVAY 190
+R+H +G PY +P+LS++ D+ P+ CC + + CE F + RR + C Y
Sbjct: 794 ARAHRYGAAPYRLPPFIPTLSNYQLDLNPYRTCCKYADH----CE-FYYWRRMTNGCQDY 848
Query: 191 QSPGVAGIFGDPHIVTFDDLQYTFNGKGEYVLVRVDHPQLKLDVQCRFEQVSRNI-YGPV 367
++P I+G+PH++T+D ++YT GKG YVL D P KL VQ R EQ + + V
Sbjct: 849 RAPAAGYIYGEPHVITYDGIRYTMPGKGYYVLTMSDSPYHKLMVQVRLEQPDDTLWHAHV 908
Query: 368 NATHLTSVVAASNNSVPIEVRLRPQHAQWRYR 463
NAT +T V N+S ++V R +WRYR
Sbjct: 909 NATVITGVAVQENDSSIVQVYARKPMRRWRYR 940
>Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical protein
F54D1.6 protein.
Length = 1423
Score = 69.7 bits (163), Expect = 1e-12
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 17/167 (10%)
Frame = +2
Query: 14 RSHDFGFTPYNEANKVPSLSHWFHDMIPFYQCCMWQEEQAVGCETFRFERRPSQDCVAYQ 193
R+++FG PY +VP LS + +D +P++ CC + + + C+ F + RRPS C YQ
Sbjct: 772 RAYEFGTAPYMGQYEVPGLSAFHNDYMPYFLCCKFADFR---CQMF-YWRRPSSGCQEYQ 827
Query: 194 SPGVAGIFGDPHIVTFDDLQYTFNGKGEYVLVRVDH----PQLKLDVQCR--------FE 337
P + G T D+ ++ FN G Y + + H P++K+ ++ F
Sbjct: 828 PPAYGEVMGAGTFNTIDNDKFIFNEPGVYNGLYIPHTLSTPEVKVQIRMERYPNRRVDFS 887
Query: 338 QVSR-----NIYGPVNATHLTSVVAASNNSVPIEVRLRPQHAQWRYR 463
+ R ++ P NAT +T VV + + + V R ++RYR
Sbjct: 888 LLGRYMAQQDLVQPTNATVVTGVVLEATGTDRVHVVARKDTRRFRYR 934
>Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical protein
R09E10.5 protein.
Length = 1459
Score = 61.7 bits (143), Expect = 3e-10
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 17/167 (10%)
Frame = +2
Query: 14 RSHDFGFTPYNEANKVPSLSHWFHDMIPFYQCCMWQEEQAVGCETFRFERRPSQDCVAYQ 193
R+++FG PY +VP LS + +D +P++ CC + + + C+ F + RRPS C YQ
Sbjct: 805 RAYEFGTAPYMGQFEVPGLSVFHNDYMPYFLCCKFADFR---CQMF-YWRRPSSACQQYQ 860
Query: 194 SPGVAGIFGDPHIVTFDDLQYTFNGKGEYVL-----------VRVD-----HPQLKLDVQ 325
P + G T D+ ++ FN G + VR+ +P K+D
Sbjct: 861 PPAIGHAQGAGVFQTIDNDKFIFNQPGVFNFLYIPQSVRTPEVRIQTRLERYPNRKVDFG 920
Query: 326 CRFEQVSR-NIYGPVNATHLTSVVAASNNSVPIEVRLRPQHAQWRYR 463
+S+ + P NAT +T + + + + V R ++RYR
Sbjct: 921 LLGRYISQYELVQPTNATVITGIALEATGTERVIVMTRKDTRRFRYR 967
>Z81527-16|CAB04280.1| 915|Caenorhabditis elegans Hypothetical
protein T01D3.6b protein.
Length = 915
Score = 31.5 bits (68), Expect = 0.31
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 140 CETFRFERRPSQDCVAYQSPGVAGIFGDPHIVTFDDLQYTFNGKGEYV 283
C+ RR +DC A + GDPH VT+D L++ + G YV
Sbjct: 168 CKPGYTARRNGRDCDMKVQQ--ACMSGDPHYVTYDGLRFDYQGTCPYV 213
>Z81527-15|CAB04279.1| 927|Caenorhabditis elegans Hypothetical
protein T01D3.6a protein.
Length = 927
Score = 31.5 bits (68), Expect = 0.31
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 140 CETFRFERRPSQDCVAYQSPGVAGIFGDPHIVTFDDLQYTFNGKGEYV 283
C+ RR +DC A + GDPH VT+D L++ + G YV
Sbjct: 168 CKPGYTARRNGRDCDMKVQQ--ACMSGDPHYVTYDGLRFDYQGTCPYV 213
>Z81110-8|CAB03263.1| 915|Caenorhabditis elegans Hypothetical
protein T01D3.6b protein.
Length = 915
Score = 31.5 bits (68), Expect = 0.31
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 140 CETFRFERRPSQDCVAYQSPGVAGIFGDPHIVTFDDLQYTFNGKGEYV 283
C+ RR +DC A + GDPH VT+D L++ + G YV
Sbjct: 168 CKPGYTARRNGRDCDMKVQQ--ACMSGDPHYVTYDGLRFDYQGTCPYV 213
>Z81110-7|CAB03262.1| 927|Caenorhabditis elegans Hypothetical
protein T01D3.6a protein.
Length = 927
Score = 31.5 bits (68), Expect = 0.31
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 140 CETFRFERRPSQDCVAYQSPGVAGIFGDPHIVTFDDLQYTFNGKGEYV 283
C+ RR +DC A + GDPH VT+D L++ + G YV
Sbjct: 168 CKPGYTARRNGRDCDMKVQQ--ACMSGDPHYVTYDGLRFDYQGTCPYV 213
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 224 PHIVTFDDLQYTFNGKGEYVLVRVDHPQ 307
PH VT DDL +TF G +++ +P+
Sbjct: 208 PHSVTEDDLLFTFGSFGPLAALKILYPR 235
>U50198-1|AAA91259.2| 529|Caenorhabditis elegans Hypothetical
protein R04B3.1 protein.
Length = 529
Score = 27.5 bits (58), Expect = 5.1
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Frame = -1
Query: 336 SNLHCTSSFNCGWSTLTRTYSPFPL-KVY*RSSKVT-I*GSPNIPATPGD**ATQSCDGR 163
+ LHC S+ NC W + L + Y +K+ I GS ++P + + D R
Sbjct: 89 AELHCLSALNCTWQNTVEDDLDWVLGEGYVDPTKLALITGSQSLPGSFDQSFLILASDPR 148
Query: 162 RSNLNVSHPTACSSCHMQH**NGIISWNQWDKDGTLLAS 46
S+ N + C GI+S+ W L S
Sbjct: 149 PSHQNGQLVSLAIGCQQS---TGILSFRFWRSRARTLGS 184
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 27.5 bits (58), Expect = 5.1
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = -3
Query: 361 SIDISRNLL----ESALHVQFQLRMVYSHQDIFTLSVESVLKIIEGNNMRITKYTRNPRR 194
S+D+S N L ++AL + QLR + ++ T+ +K++E + + + NP
Sbjct: 592 SLDVSNNRLAKLGKTALAAKSQLRRLNLKGNLLTVVATESMKVVEAVHPLKVEISENP-- 649
Query: 193 LISDAVL*W 167
LI D + W
Sbjct: 650 LICDCQMGW 658
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 27.5 bits (58), Expect = 5.1
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = -3
Query: 361 SIDISRNLL----ESALHVQFQLRMVYSHQDIFTLSVESVLKIIEGNNMRITKYTRNPRR 194
S+D+S N L ++AL + QLR + ++ T+ +K++E + + + NP
Sbjct: 592 SLDVSNNRLAKLGKTALAAKSQLRRLNLKGNLLTVVATESMKVVEAVHPLKVEISENP-- 649
Query: 193 LISDAVL*W 167
LI D + W
Sbjct: 650 LICDCQMGW 658
>AF016421-10|AAC25792.1| 473|Caenorhabditis elegans Hypothetical
protein F44E7.7 protein.
Length = 473
Score = 27.1 bits (57), Expect = 6.7
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 93 FRSISA-ACGRKSKLLDVKHLDLNVVHHKTASLISLLGLRVYLVILILLPSMIFSTLSTE 269
F SIS A SK +V+H+ V HKT LI +L L V + S F+ + E
Sbjct: 14 FDSISTLASATFSKRTNVRHISSFVFFHKTRYLIMILSLLCMTVGQMNSLSFNFTVICME 73
Query: 270 RV 275
V
Sbjct: 74 DV 75
>Z81082-1|CAB03094.2| 291|Caenorhabditis elegans Hypothetical
protein F42G4.5 protein.
Length = 291
Score = 26.6 bits (56), Expect = 8.9
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -2
Query: 200 QETDKRRSLVMDDVQI*MFHIQQLALPATCSTDRTESYRGTNGIKMAPC*LRCMV*IQSH 21
QE K S++ Q+ I+ L+ +T S+ RT S R T PC L + +Q+H
Sbjct: 37 QEKKKSNSILRQLSQLSRRSIESLS--STLSSPRTPSPRATFSDYPNPCELILLSALQAH 94
Query: 20 VI 15
+I
Sbjct: 95 II 96
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 132 LLDVKHLDLNVVHHKTASLISLLGLRVYLVILIL--LPSMIFSTLSTERV 275
L+DV+ DLN + +L++ +G + ++ L+L +IFS +RV
Sbjct: 533 LMDVRGHDLNEIDQTLLTLLTYVGCIISIICLLLTFFAYLIFSRNGGDRV 582
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 132 LLDVKHLDLNVVHHKTASLISLLGLRVYLVILIL--LPSMIFSTLSTERV 275
L+DV+ DLN + +L++ +G + ++ L+L +IFS +RV
Sbjct: 535 LMDVRGHDLNEIDQTLLTLLTYVGCIISIICLLLTFFAYLIFSRNGGDRV 584
>U41530-1|AAA83273.3| 636|Caenorhabditis elegans Hypothetical
protein SSSD1.1 protein.
Length = 636
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 141 VKHLDLNVVHHKTASLISLLGLRVYLVILILLPSMI----FSTLSTERVNMSW 287
V+HLD A+ + + RV L++ I P M F+ L++ + +SW
Sbjct: 260 VEHLDHGAYECVVANSVETISTRVMLLVEITKPQMASSIKFTCLNSSSMRISW 312
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 132 LLDVKHLDLNVVHHKTASLISLLGLRVYLVILIL--LPSMIFSTLSTERV 275
L+DV+ DLN + +L++ +G + ++ L+L +IFS +RV
Sbjct: 533 LMDVRGHDLNEIDQTLLTLLTYVGCIISIICLLLTFFAYLIFSRNGGDRV 582
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 132 LLDVKHLDLNVVHHKTASLISLLGLRVYLVILIL--LPSMIFSTLSTERV 275
L+DV+ DLN + +L++ +G + ++ L+L +IFS +RV
Sbjct: 535 LMDVRGHDLNEIDQTLLTLLTYVGCIISIICLLLTFFAYLIFSRNGGDRV 584
>AF098997-11|AAC68721.1| 250|Caenorhabditis elegans Hypothetical
protein T10D4.11 protein.
Length = 250
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 312 NWTCNADSSKFLEISMD 362
N+TCNADS F+ S D
Sbjct: 148 NFTCNADSQTFIRSSFD 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,781,922
Number of Sequences: 27780
Number of extensions: 255124
Number of successful extensions: 703
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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