Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P23
         (444 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   3.0  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   3.0  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   3.0  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   4.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   5.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    20   9.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   9.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   9.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   9.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   9.2  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    20   9.2  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 109 KHLSHIFLAERKQVLIL 59
           KH+ +I L  RKQV+++
Sbjct: 275 KHIDNISLRARKQVVLM 291


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 38 LQTQRCRED*HLLALS 85
          L TQRC+E  + LA+S
Sbjct: 9  LMTQRCKEKLNTLAIS 24


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -2

Query: 182 HHGVYKRTSPSGN*HFPLPNGWSPQAS*SH 93
           HH      + +    FPL  G SP AS  H
Sbjct: 24  HHHEQSAAAAAAYRSFPLSLGMSPYASSQH 53


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 116 TTHLGAENVNFQMETYVYKRRGDGT 190
           T  L   N N+   TY+ K  G G+
Sbjct: 272 TFTLSNSNTNYNPGTYINKEAGGGS 296


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 382 VSKCTRSETSSNWC 341
           VS C +  +SS WC
Sbjct: 135 VSSCHQGFSSSTWC 148


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 420 MNSIGSRNAAWIWLV 376
           +N   S   AWIWL+
Sbjct: 455 LNDFISHQHAWIWLL 469


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 420 MNSIGSRNAAWIWLV 376
           +N   S   AWIWL+
Sbjct: 455 LNDFISHQHAWIWLL 469


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 420 MNSIGSRNAAWIWLV 376
           +N   S   AWIWL+
Sbjct: 455 LNDFISHQHAWIWLL 469


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 420 MNSIGSRNAAWIWLV 376
           +N   S   AWIWL+
Sbjct: 455 LNDFISHQHAWIWLL 469


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 265 WILHGDNSTSSEYKLFPCT 209
           W+L G   T +  K F CT
Sbjct: 21  WLLQGHIRTHTGEKPFSCT 39


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 405 SRNAAWIWLV 376
           S   AWIWLV
Sbjct: 214 SHQHAWIWLV 223


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +2

Query: 110 AATTHLGAENVNFQMETYVYKRRGDGTH 193
           AAT HLG+       E++ +      TH
Sbjct: 148 AATHHLGSVYSRHPYESWPFNTMSGATH 175


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 405 SRNAAWIWLV 376
           S   AWIWLV
Sbjct: 447 SHQHAWIWLV 456


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 405 SRNAAWIWLV 376
           S   AWIWLV
Sbjct: 447 SHQHAWIWLV 456


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 439 LSRVQNDEQHWFA 401
           L RVQN E  W +
Sbjct: 212 LERVQNGENQWIS 224


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,829
Number of Sequences: 336
Number of extensions: 2033
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)