Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P22
         (306 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C6H6 Cluster: SJCHGC08737 protein; n=1; Schistosoma j...    30   8.8  
UniRef50_A7ANC4 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  

>UniRef50_Q5C6H6 Cluster: SJCHGC08737 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC08737 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 181

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = -3

Query: 247 KATTTRVNKLNTLFQSG-FYKSKNNNRPQSTRTSTRGDS 134
           K ++  +N+L  LFQS  FY++ N ++P+ TR+S  G S
Sbjct: 99  KQSSQNINRL-PLFQSNYFYENLNKHQPKRTRSSRDGHS 136


>UniRef50_A7ANC4 Cluster: Putative uncharacterized protein; n=1;
           Babesia bovis|Rep: Putative uncharacterized protein -
           Babesia bovis
          Length = 880

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = -3

Query: 220 LNTLFQSGFYKSKNNNRPQSTRTSTRGDSLYI 125
           L T  +  F++  N N P STR STRGDSL++
Sbjct: 388 LLTKAKKRFFREVNLNFP-STRISTRGDSLFV 418


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,773,724
Number of Sequences: 1657284
Number of extensions: 3331391
Number of successful extensions: 8321
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8320
length of database: 575,637,011
effective HSP length: 78
effective length of database: 446,368,859
effective search space used: 10266483757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)