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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P21
         (501 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual        48   1e-06
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s...    44   1e-05
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S...    42   5e-05
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch...    36   0.005
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom...    36   0.005
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce...    33   0.024
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc...    32   0.042
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R...    30   0.17 
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S...    29   0.39 
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S...    28   0.91 
SPBC13E7.06 |msd1|mug172|spindle pole body protein Msd1|Schizosa...    27   1.2  
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo...    27   2.1  
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces...    27   2.1  
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch...    26   2.8  
SPAC13G7.12c |||choline kinase |Schizosaccharomyces pombe|chr 1|...    26   3.7  
SPBC15D4.09c |||cystathionine gamma-synthase |Schizosaccharomyce...    25   4.8  
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy...    25   6.4  
SPAC4H3.03c |||glucan 1,4-alpha-glucosidase |Schizosaccharomyces...    25   6.4  
SPCC18B5.11c |cds1||replication checkpoint kinase Cds1|Schizosac...    25   8.4  
SPCC663.15c |||conserved fungal protein|Schizosaccharomyces pomb...    25   8.4  
SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase ...    25   8.4  

>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 234

 Score = 47.6 bits (108), Expect = 1e-06
 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = -1

Query: 498 GRYEVVKLLISKGAN-VNTKTNRGQSSLHYACSKGHKEVVKLLIDFEANVNATDILGATP 322
           GR  +V+LL  K    +  K  +GQ+ LH A + G  +VVK LI   A +N +D  G TP
Sbjct: 118 GRLSIVQLLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSDSYGFTP 177

Query: 321 LH 316
           LH
Sbjct: 178 LH 179



 Score = 47.6 bits (108), Expect = 1e-06
 Identities = 27/68 (39%), Positives = 36/68 (52%)
 Frame = -2

Query: 311 ATAQGRSNIVDILVACSDIDLNITDSTGSTPLHLACEEDREAVACILVKAGCNTKIMNKE 132
           A A G+  +V  L++     LN +DS G TPLH A  E    V   LV+AG +T   + E
Sbjct: 148 AAAVGKIQVVKYLIS-QRAPLNTSDSYGFTPLHFALAEGHPDVGVELVRAGADTLRKDSE 206

Query: 131 KQTPLDVC 108
             T L+VC
Sbjct: 207 NHTALEVC 214



 Score = 42.7 bits (96), Expect = 3e-05
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = -1

Query: 486 VVKLLISKGANVNTKTNRG-QSSLHYACSKGHKEVVKLLIDFEAN-VNATDILGATPLHR 313
           V++ LI++     T T RG Q+ LHYA  KG   +V+LL D     +   D+ G TPLHR
Sbjct: 88  VIEELINRSDVDPTITTRGGQTCLHYAAGKGRLSIVQLLCDKAPELIRKKDLQGQTPLHR 147



 Score = 38.7 bits (86), Expect = 5e-04
 Identities = 17/38 (44%), Positives = 27/38 (71%)
 Frame = -1

Query: 498 GRYEVVKLLISKGANVNTKTNRGQSSLHYACSKGHKEV 385
           G+ +VVK LIS+ A +NT  + G + LH+A ++GH +V
Sbjct: 152 GKIQVVKYLISQRAPLNTSDSYGFTPLHFALAEGHPDV 189



 Score = 31.9 bits (69), Expect = 0.056
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 290 NIVDILVACSDIDLNITDSTGSTPLHLACEEDREAVACILV-KAGCNTKIMNKEKQTPL 117
           N+++ L+  SD+D  IT   G T LH A  + R ++  +L  KA    +  + + QTPL
Sbjct: 87  NVIEELINRSDVDPTITTRGGQTCLHYAAGKGRLSIVQLLCDKAPELIRKKDLQGQTPL 145



 Score = 25.0 bits (52), Expect = 6.4
 Identities = 18/65 (27%), Positives = 26/65 (40%)
 Frame = -2

Query: 311 ATAQGRSNIVDILVACSDIDLNITDSTGSTPLHLACEEDREAVACILVKAGCNTKIMNKE 132
           A  +GR +IV +L   +   +   D  G TPLH A    +  V   L+         +  
Sbjct: 114 AAGKGRLSIVQLLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSDSY 173

Query: 131 KQTPL 117
             TPL
Sbjct: 174 GFTPL 178


>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
           subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 657

 Score = 44.0 bits (99), Expect = 1e-05
 Identities = 19/40 (47%), Positives = 27/40 (67%)
 Frame = -1

Query: 432 GQSSLHYACSKGHKEVVKLLIDFEANVNATDILGATPLHR 313
           G +SLH+ACS GH E++KLL+   A++   + L  TPL R
Sbjct: 248 GHTSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTPLMR 287



 Score = 32.3 bits (70), Expect = 0.042
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -2

Query: 260 DIDLN-ITDSTGSTPLHLACEEDREAVACILVKAGCNTKIMNKEKQTPL 117
           D  +N + D  G T LH AC      +  +L++A  +  + N+  QTPL
Sbjct: 237 DFQVNSVIDDDGHTSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTPL 285


>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
           role|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 207

 Score = 41.9 bits (94), Expect = 5e-05
 Identities = 19/60 (31%), Positives = 33/60 (55%)
 Frame = -1

Query: 498 GRYEVVKLLISKGANVNTKTNRGQSSLHYACSKGHKEVVKLLIDFEANVNATDILGATPL 319
           G+ +VV   +  G + N     G + +H A S GH +++K+L++   ++N  D  G TPL
Sbjct: 15  GKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDGETPL 74



 Score = 39.1 bits (87), Expect = 4e-04
 Identities = 22/68 (32%), Positives = 36/68 (52%)
 Frame = -2

Query: 311 ATAQGRSNIVDILVACSDIDLNITDSTGSTPLHLACEEDREAVACILVKAGCNTKIMNKE 132
           A + G++++V +    S I  N  D  G TP+H A       +  ILV+ G +  I +++
Sbjct: 11  AASDGKTDVV-LKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQD 69

Query: 131 KQTPLDVC 108
            +TPL VC
Sbjct: 70  GETPLFVC 77


>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 642

 Score = 35.5 bits (78), Expect = 0.005
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = -2

Query: 311 ATAQGRSNIVDILVACSDIDLNITDSTGSTPLHLACEEDREAVACILVKAGCNTKIMNKE 132
           A +QG  + V  L++   ID+N TD  G+T LH A    +  +   L++ G +   +  +
Sbjct: 7   AASQGELDTVKNLISSEKIDVNATDEGGATALHWAALNQQIPICKFLLEHGADVNAIGGD 66

Query: 131 KQ 126
            Q
Sbjct: 67  LQ 68



 Score = 33.9 bits (74), Expect = 0.014
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = -1

Query: 498 GRYEVVKLLIS-KGANVNTKTNRGQSSLHYACSKGHKEVVKLLIDFEANVNAT-DILGAT 325
           G  + VK LIS +  +VN     G ++LH+A       + K L++  A+VNA    L A 
Sbjct: 11  GELDTVKNLISSEKIDVNATDEGGATALHWAALNQQIPICKFLLEHGADVNAIGGDLQAA 70

Query: 324 PLH 316
           P+H
Sbjct: 71  PIH 73



 Score = 33.5 bits (73), Expect = 0.018
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -1

Query: 423 SLHYACSKGHKEVVKLLIDFEA-NVNATDILGATPLHRGHCTRQK*YC*YI 274
           SL  A S+G  + VK LI  E  +VNATD  GAT LH     +Q   C ++
Sbjct: 3   SLFLAASQGELDTVKNLISSEKIDVNATDEGGATALHWAALNQQIPICKFL 53



 Score = 29.1 bits (62), Expect = 0.39
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -2

Query: 260 DIDLNITDSTGSTPLHLACEEDREAVACILVKAGCNTKIMNKEKQTPL 117
           DI +++ D    TPL  A     E +   L++ G +    +++K TPL
Sbjct: 124 DISVDLRDDQQHTPLMWASYHGNEPITNCLLRWGADVLATDEDKMTPL 171



 Score = 28.3 bits (60), Expect = 0.69
 Identities = 16/57 (28%), Positives = 31/57 (54%)
 Frame = -1

Query: 486 VVKLLISKGANVNTKTNRGQSSLHYACSKGHKEVVKLLIDFEANVNATDILGATPLH 316
           +V  L+    +V+ + ++  + L +A   G++ +   L+ + A+V ATD    TPLH
Sbjct: 116 LVVYLLHLDISVDLRDDQQHTPLMWASYHGNEPITNCLLRWGADVLATDEDKMTPLH 172


>SPBP16F5.05c |||ribosome biogenesis protein
           Nop8|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 146

 Score = 35.5 bits (78), Expect = 0.005
 Identities = 13/54 (24%), Positives = 29/54 (53%)
 Frame = -1

Query: 453 VNTKTNRGQSSLHYACSKGHKEVVKLLIDFEANVNATDILGATPLHRGHCTRQK 292
           +N +   G +++H+A   GH E+ KLL++   + +  +I   +P++      Q+
Sbjct: 64  INAQNESGNTAMHWAALNGHAEICKLLLEAGGDPHIKNIYEKSPIYEADIRNQQ 117



 Score = 29.9 bits (64), Expect = 0.22
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = -1

Query: 498 GRYEVVKLLISKGANVNTKTNRGQSSLHYACSKGHKEVVKLLIDFE 361
           G  E+ KLL+  G + + K    +S ++ A  +  ++V+ L +DFE
Sbjct: 82  GHAEICKLLLEAGGDPHIKNIYEKSPIYEADIRNQQKVMDLFLDFE 127



 Score = 29.1 bits (62), Expect = 0.39
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -1

Query: 453 VNTKTNRGQSSLHYACSKGHKEVVKLLIDF--EANVNATDILGATPLH 316
           ++ +   G S LH A + GH  VV+ +I +  +  +NA +  G T +H
Sbjct: 29  LSRRDENGNSGLHMASANGHIAVVQKIIPYLNKEVINAQNESGNTAMH 76


>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1151

 Score = 33.1 bits (72), Expect = 0.024
 Identities = 23/74 (31%), Positives = 34/74 (45%)
 Frame = -2

Query: 326  LLYTEATAQGRSNIVDILVACSDIDLNITDSTGSTPLHLACEEDREAVACILVKAGCNTK 147
            LL+  A A G SN    L      D+N  D+ G TPLH A   D + +   L+  G    
Sbjct: 865  LLHLTA-ACGLSNASTFLCNAG-CDVNKRDALGYTPLHYASLYDHKDICVNLLSNGAKPD 922

Query: 146  IMNKEKQTPLDVCS 105
            ++    + P+D+ S
Sbjct: 923  VIGASGKKPIDLSS 936



 Score = 29.5 bits (63), Expect = 0.30
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = -1

Query: 474  LISKGANVNTKTNRGQSSLHYACSKGHKEVVKLLIDFEANVNATDILGAT 325
            L + G +VN +   G + LHYA    HK++    ++  +N    D++GA+
Sbjct: 881  LCNAGCDVNKRDALGYTPLHYASLYDHKDI---CVNLLSNGAKPDVIGAS 927



 Score = 25.0 bits (52), Expect = 6.4
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = -2

Query: 254  DLNITDSTGSTPLHLACEEDREAVACILVKAGCNTKIMNKEKQTPLDVCSV 102
            D ++ + +G + LHL         +  L  AGC+    +    TPL   S+
Sbjct: 854  DFSLVNESGRSLLHLTAACGLSNASTFLCNAGCDVNKRDALGYTPLHYASL 904


>SPBC2F12.05c |||sterol binding ankyrin repeat
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1310

 Score = 32.3 bits (70), Expect = 0.042
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = -2

Query: 287 IVDILVACSDIDLNITDSTGSTPLHLACEEDR-EAVACILVKAGCNTKIMNKEKQTPLDV 111
           +V  +++  D+D+N  D   +TPLHLA    R + V  +L+    N  ++N   +    V
Sbjct: 70  MVKHILSVFDVDVNAYDKNKNTPLHLAAMAGRQDIVEALLLHPDINYNLVNANNKKAYQV 129

Query: 110 CS 105
            +
Sbjct: 130 AT 131



 Score = 25.4 bits (53), Expect = 4.8
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -1

Query: 453 VNTKTNRGQSSLHYACSKGHKEVVKLLIDFEANVNATDILGATP 322
           V+ KT  GQ+ LH A      E+VK L+D  A+    D  G  P
Sbjct: 184 VDIKT--GQTYLHVATKAKDAELVKWLLDNGADPYRRDKFGKLP 225


>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
           Res1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 637

 Score = 30.3 bits (65), Expect = 0.17
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -1

Query: 432 GQSSLHYACSKGHKEVVKLLIDFEANVNATDILGATPLHR 313
           G ++LH+A + G+ E++  L+   ANV A + L  T L R
Sbjct: 237 GHTALHWAAAMGNLEMMHALLQAGANVVAVNYLQQTSLMR 276


>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
            |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1944

 Score = 29.1 bits (62), Expect = 0.39
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 263  SKPLIYQQYYFCLVQWPLCKGVAPNISVAFTFASKSINNFTTSLCPFEQA*CSDD*PL 436
            SKPL+ +  ++ L++    +GV  ++S      SKSI+N +T L        S D P+
Sbjct: 1755 SKPLMQEDIFYSLIEDAKTRGVWRDLSANQFKNSKSISNVSTHLASNNLNLASRDTPI 1812


>SPCC1827.04 |||ankyrin repeat protein, unknown biological
           role|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 600

 Score = 27.9 bits (59), Expect = 0.91
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -2

Query: 227 STPLHLACEEDREAVACILVKAGCNTKIMNKEKQTPLDV 111
           STPLH A  +    +   L++ G +  ++N   +TP ++
Sbjct: 434 STPLHYAVTQKNAKLVAKLLRNGADPAMLNGNGKTPFEI 472


>SPBC13E7.06 |msd1|mug172|spindle pole body protein
           Msd1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 331

 Score = 27.5 bits (58), Expect = 1.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -2

Query: 470 SVKELM*IQKQTEVNRHYIMLVQKDTKR 387
           S+ EL  I ++ E N+H I ++QK+ KR
Sbjct: 292 SIDELDAILEENEKNKHLINILQKENKR 319


>SPCC1739.11c |cdc11||SIN component scaffold protein
           Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1045

 Score = 26.6 bits (56), Expect = 2.1
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 376 IDRL*SKCKCNRYIRSNSFTQRPLHKAEVILL 281
           +D L     CN  I+  SFT   LH+ E +LL
Sbjct: 711 LDGLLKLSACNNRIKELSFTNSNLHRLEELLL 742


>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 713

 Score = 26.6 bits (56), Expect = 2.1
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -1

Query: 489 EVVKLLISKGANVNTKTNRGQSSLHYACSKGHKE 388
           EV  L+ SK  N N K  + QSS      KGH +
Sbjct: 652 EVAPLVSSKKMNENLKAAKNQSSESLTSFKGHTD 685


>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
           Y|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1002

 Score = 26.2 bits (55), Expect = 2.8
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -2

Query: 290 NIVDILVACSDIDLNITDSTGSTPLHLACEEDREAVACILVKAGCNTKI 144
           NI DI   C D +      TG+   +L  E  +EA+       GCNT++
Sbjct: 836 NIYDIREECRDQEHLCYPETGAIESYLNQEFVQEALGVEYDYKGCNTEV 884


>SPAC13G7.12c |||choline kinase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 456

 Score = 25.8 bits (54), Expect = 3.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 137 CSLFLYCNQLLPIYRQQLLYPLHKLDVME*N 229
           C   L CN   PI+R ++L  +HKL +   N
Sbjct: 23  CKGSLDCNDPDPIFRHKVLVIIHKLAISSWN 53


>SPBC15D4.09c |||cystathionine gamma-synthase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 610

 Score = 25.4 bits (53), Expect = 4.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 120 WCLLFFVHYFCIATSFYQYTGNSFS 194
           + +LF   YF IA  F+Q+TG+  S
Sbjct: 146 YSVLFPSKYFGIAKQFWQHTGDGIS 170


>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 523

 Score = 25.0 bits (52), Expect = 6.4
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 411 ACSKGHKEVVKLLID-FEANVNATDILGATPL 319
           AC +G  EVVK L++ +   +N  D    +PL
Sbjct: 59  ACRRGDLEVVKSLVENYNTPINQVDQFDYSPL 90


>SPAC4H3.03c |||glucan 1,4-alpha-glucosidase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 649

 Score = 25.0 bits (52), Expect = 6.4
 Identities = 13/58 (22%), Positives = 27/58 (46%)
 Frame = +1

Query: 106 LHTSSGVCFSLFIIFVLQPAFTNIQATASLSSSQARCNGVEPVESVILRSISEQATNI 279
           +HTS+ +     +  +  P F +    A +  ++A    + P+E    + + E +TNI
Sbjct: 28  MHTSAMISLDGSVEMMCWPNFDSPSIFARILDARAGHFSITPIEQTSCKQMYEPSTNI 85


>SPCC18B5.11c |cds1||replication checkpoint kinase
           Cds1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 460

 Score = 24.6 bits (51), Expect = 8.4
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 8/48 (16%)
 Frame = +1

Query: 175 IQATASL---SSSQARC-----NGVEPVESVILRSISEQATNISTILL 294
           +  TAS+   SSSQA+C      G  P+E ++   ISE+  ++   +L
Sbjct: 367 VMLTASIPFASSSQAKCIELISKGAYPIEPLLENEISEEGIDLINRML 414


>SPCC663.15c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 657

 Score = 24.6 bits (51), Expect = 8.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 459 ANVNTKTNRGQSSLHYACSKGHKEVVKLLI 370
           ANVN     G   LHY   K  +E   LL+
Sbjct: 140 ANVNMDDANGPERLHYPSVKRLREAYSLLV 169


>SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase
           Ppk6|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 775

 Score = 24.6 bits (51), Expect = 8.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 426 SSLHYACSKGHKEVVKLLIDFEANVN 349
           S LH+  +  H  +VK++  FE N N
Sbjct: 559 SILHFLKAHSHPNIVKMITFFEDNEN 584


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,650,758
Number of Sequences: 5004
Number of extensions: 30345
Number of successful extensions: 116
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 198176188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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