Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_P21
(501 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 3.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 3.1
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 22 4.1
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 21 5.5
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 21 5.5
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 7.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 7.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 7.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 7.2
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 21 9.5
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 21 9.5
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 3.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 120 WCLLFFVHYFCIATSF 167
+CLLF + + CIA S+
Sbjct: 453 FCLLFLMFFECIAISW 468
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 3.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 120 WCLLFFVHYFCIATSF 167
+CLLF + + CIA S+
Sbjct: 506 FCLLFLMFFECIAISW 521
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.8 bits (44), Expect = 4.1
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = -1
Query: 444 KTNRGQSSLHYACSKGHKEVVKLLIDFEANVNATDILGATPLHRGHCTRQ 295
+T+ G+ + C + HK + D + G P H HC RQ
Sbjct: 2 RTHTGEKP--FECPECHKRFTR---DHHLKTHMRLHTGEKPYHCSHCDRQ 46
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 21.4 bits (43), Expect = 5.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 74 LRKLKYSLILHCIH 115
LR LKY +++H H
Sbjct: 12 LRALKYPMVVHVYH 25
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 21.4 bits (43), Expect = 5.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 74 LRKLKYSLILHCIH 115
LR LKY +++H H
Sbjct: 12 LRALKYPMVVHVYH 25
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.0 bits (42), Expect = 7.2
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 99 FYTAYIKWCLLFFVHY 146
F AY + FF+HY
Sbjct: 470 FPVAYFMFLTFFFIHY 485
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 7.2
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 99 FYTAYIKWCLLFFVHY 146
F AY + FF+HY
Sbjct: 456 FPVAYFMFLTFFFIHY 471
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.0 bits (42), Expect = 7.2
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 99 FYTAYIKWCLLFFVHY 146
F AY + FF+HY
Sbjct: 490 FPVAYFMFLTFFFIHY 505
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.0 bits (42), Expect = 7.2
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 99 FYTAYIKWCLLFFVHY 146
F AY + FF+HY
Sbjct: 439 FPVAYFMFLTFFFIHY 454
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = -1
Query: 414 YACSKGHKEVVKLLIDFEANVNATDILGATP 322
Y C H+ ++++ ANV D G P
Sbjct: 207 YRCRTMHRLTRQVVVSSVANVRIADHRGVMP 237
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = -1
Query: 414 YACSKGHKEVVKLLIDFEANVNATDILGATP 322
Y C H+ ++++ ANV D G P
Sbjct: 207 YRCRTMHRLTRQVVVSSVANVRIADHRGVMP 237
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 20.6 bits (41), Expect = 9.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 375 LIDFEANVNATDILGATP 322
L+D EANV+ +LG P
Sbjct: 83 LVDDEANVDEDIMLGLLP 100
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 20.6 bits (41), Expect = 9.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 375 LIDFEANVNATDILGATP 322
L+D EANV+ +LG P
Sbjct: 83 LVDDEANVDEDIMLGLLP 100
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,943
Number of Sequences: 438
Number of extensions: 2180
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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